Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS4A01G359800.1 | Wheat | cytosol | 57.03 | 93.22 |
| HORVU5Hr1G117110.1 | Barley | cytosol | 85.14 | 83.31 |
| TraesCS5D01G388700.1 | Wheat | cytosol, golgi, unclear | 79.61 | 79.98 |
| Os03t0738600-01 | Rice | plasma membrane, plastid | 69.12 | 68.97 |
| TraesCS5D01G388800.1 | Wheat | cytosol | 70.62 | 68.34 |
| EES04028 | Sorghum | cytosol | 68.55 | 68.16 |
| EES04025 | Sorghum | cytosol | 67.86 | 67.86 |
| TraesCS6D01G122000.1 | Wheat | cytosol | 24.19 | 67.74 |
| TraesCS4D01G035200.1 | Wheat | cytosol | 64.63 | 67.67 |
| Zm00001d042540_P008 | Maize | cytosol | 69.01 | 67.15 |
| Zm00001d042541_P002 | Maize | cytosol | 67.63 | 66.4 |
| CDY70916 | Canola | cytosol | 36.06 | 62.1 |
| KRH35534 | Soybean | cytosol | 31.57 | 61.16 |
| PGSC0003DMT400063654 | Potato | cytosol | 34.33 | 60.69 |
| KRH16725 | Soybean | cytosol | 15.9 | 59.74 |
| TraesCS4D01G035100.1 | Wheat | cytosol | 60.37 | 59.68 |
| KRH62399 | Soybean | cytosol, endoplasmic reticulum | 15.78 | 58.05 |
| KRH62403 | Soybean | cytosol, endoplasmic reticulum | 14.86 | 56.83 |
| KRH57987 | Soybean | cytosol | 16.59 | 55.81 |
| GSMUA_Achr1P22970_001 | Banana | cytosol | 54.26 | 55.67 |
| PGSC0003DMT400028158 | Potato | cytosol | 55.18 | 55.57 |
| Solyc08g029000.2.1 | Tomato | cytosol, extracellular, nucleus | 55.07 | 55.52 |
| VIT_14s0128g00780.t01 | Wine grape | cytosol | 54.49 | 55.06 |
| PGSC0003DMT400054145 | Potato | cytosol | 54.15 | 54.78 |
| VIT_14s0128g00790.t01 | Wine grape | cytosol | 54.49 | 54.43 |
| Solyc08g014000.2.1 | Tomato | cytosol, nucleus, plastid | 53.92 | 54.42 |
| Solyc01g099160.2.1 | Tomato | cytosol, extracellular, nucleus | 53.8 | 54.18 |
| Bra021322.1-P | Field mustard | cytosol | 53.46 | 54.14 |
| Solyc09g075860.2.1 | Tomato | cytosol, nucleus | 54.03 | 53.48 |
| PGSC0003DMT400081370 | Potato | cytosol | 53.92 | 53.36 |
| PGSC0003DMT400063446 | Potato | cytosol | 49.42 | 53.36 |
| KRG91271 | Soybean | cytosol | 52.42 | 53.03 |
| KRH13357 | Soybean | endoplasmic reticulum | 14.75 | 52.89 |
| Solyc01g099180.2.1 | Tomato | cytosol | 51.96 | 52.81 |
| PGSC0003DMT400063477 | Potato | cytosol | 51.96 | 52.69 |
| Solyc01g099210.2.1 | Tomato | cytosol | 51.96 | 52.26 |
| KRH33939 | Soybean | cytosol, endoplasmic reticulum | 52.07 | 52.25 |
| AT1G55020.1 | Thale cress | cytosol | 51.61 | 52.15 |
| KRH68548 | Soybean | cytosol | 51.5 | 52.1 |
| VIT_05s0020g03170.t01 | Wine grape | cytosol | 52.53 | 52.05 |
| Solyc09g075870.1.1 | Tomato | cytosol | 51.15 | 51.99 |
| Solyc01g099200.2.1 | Tomato | cytosol, plastid | 50.35 | 51.96 |
| PGSC0003DMT400063469 | Potato | cytosol | 50.46 | 51.96 |
| PGSC0003DMT400063461 | Potato | cytosol | 41.47 | 51.87 |
| KRH23265 | Soybean | endoplasmic reticulum, nucleus | 51.73 | 51.85 |
| KRH44093 | Soybean | endoplasmic reticulum | 50.35 | 51.65 |
| Solyc01g099190.2.1 | Tomato | cytosol, extracellular, nucleus, plastid | 50.92 | 51.52 |
| KRH10050 | Soybean | endoplasmic reticulum | 50.81 | 51.46 |
| KRH23266 | Soybean | cytosol | 48.96 | 51.45 |
| KRH10051 | Soybean | endoplasmic reticulum, nucleus | 50.69 | 51.4 |
| KRH47522 | Soybean | endoplasmic reticulum, nucleus | 50.81 | 50.98 |
| KRH47066 | Soybean | endoplasmic reticulum, nucleus | 50.35 | 50.87 |
| PGSC0003DMT400063452 | Potato | cytosol | 46.77 | 50.81 |
| KRH10053 | Soybean | endoplasmic reticulum | 49.88 | 50.76 |
| KRH44094 | Soybean | endoplasmic reticulum | 50.69 | 50.75 |
| KRH44095 | Soybean | endoplasmic reticulum | 50.58 | 50.69 |
| KRH44090 | Soybean | endoplasmic reticulum | 50.12 | 50.58 |
| KRH23268 | Soybean | endoplasmic reticulum | 49.65 | 50.53 |
| KRH47525 | Soybean | endoplasmic reticulum | 50.46 | 50.46 |
| Bra039948.1-P | Field mustard | cytosol | 51.38 | 50.28 |
| CDY46325 | Canola | cytosol | 50.92 | 50.11 |
| AT3G22400.1 | Thale cress | cytosol | 51.15 | 50.11 |
| KRH23269 | Soybean | endoplasmic reticulum | 47.35 | 50.0 |
| KRH44097 | Soybean | cytosol, endoplasmic reticulum | 50.0 | 50.0 |
| CDY38326 | Canola | cytosol | 51.04 | 49.94 |
| KRH47067 | Soybean | endoplasmic reticulum | 49.54 | 49.77 |
| Bra023829.1-P | Field mustard | cytosol | 51.15 | 49.17 |
| CDY64191 | Canola | cytosol | 51.04 | 48.84 |
| TraesCS6D01G121900.1 | Wheat | mitochondrion | 25.12 | 48.77 |
| KRH47069 | Soybean | endoplasmic reticulum | 25.0 | 47.69 |
| KRH44092 | Soybean | nucleus | 47.0 | 47.61 |
| VIT_06s0004g01580.t01 | Wine grape | cytosol | 17.97 | 46.57 |
| TraesCS7D01G029400.1 | Wheat | cytosol | 13.94 | 45.66 |
| KRH47064 | Soybean | endoplasmic reticulum | 29.03 | 44.21 |
| TraesCS1D01G215800.2 | Wheat | cytosol | 42.97 | 44.09 |
| KRG88464 | Soybean | cytosol | 23.16 | 44.08 |
| Solyc01g099170.2.1 | Tomato | cytosol, mitochondrion | 25.46 | 43.25 |
| TraesCS2D01G528400.1 | Wheat | cytosol, mitochondrion | 41.13 | 39.14 |
| CDY43490 | Canola | cytosol, plasma membrane | 53.34 | 38.49 |
| Solyc01g099150.2.1 | Tomato | nucleus | 38.02 | 38.28 |
| TraesCS2D01G528500.1 | Wheat | mitochondrion, plastid | 39.98 | 37.43 |
| TraesCS4D01G347300.1 | Wheat | cytosol | 38.13 | 37.4 |
| TraesCS2D01G313400.1 | Wheat | plastid | 38.71 | 36.92 |
| TraesCS4D01G294100.1 | Wheat | plastid | 39.06 | 36.77 |
| TraesCS5D01G013400.1 | Wheat | plastid | 38.48 | 35.99 |
| TraesCS6D01G154600.1 | Wheat | plastid | 37.21 | 35.85 |
| TraesCS7D01G244800.1 | Wheat | plastid | 38.02 | 35.41 |
| TraesCS6D01G010100.1 | Wheat | plastid | 37.44 | 34.61 |
| TraesCS5D01G041100.1 | Wheat | plastid | 36.87 | 33.86 |
Protein Annotations
| Gene3D:1.20.245.10 | Gene3D:2.60.60.20 | Gene3D:3.10.450.60 | Gene3D:4.10.372.10 | Gene3D:4.10.375.10 | MapMan:50.1.12 |
| GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0016491 | GO:GO:0016702 | GO:GO:0046872 | GO:GO:0055114 | InterPro:IPR001024 | InterPro:IPR013819 |
| InterPro:IPR027433 | InterPro:LipOase | InterPro:LipOase_C | InterPro:LipOase_CS | InterPro:LipOase_C_sf | InterPro:LipOase_Fe_BS |
| InterPro:LipOase_plant | InterPro:Lipoxygenase_dom_3 | PFAM:PF00305 | PFAM:PF01477 | InterPro:PLAT/LH2_dom | InterPro:PLAT/LH2_dom_sf |
| PRINTS:PR00087 | PRINTS:PR00468 | ScanProsite:PS00081 | ScanProsite:PS00711 | PFscan:PS50095 | PFscan:PS51393 |
| PANTHER:PTHR11771 | PANTHER:PTHR11771:SF54 | SMART:SM00308 | SUPFAM:SSF48484 | SUPFAM:SSF49723 | EnsemblPlantsGene:TraesCS5D01G513100 |
| EnsemblPlants:TraesCS5D01G513100.1 | SEG:seg | : | : | : | : |
Description
No Description!
Coordinates
chr5D:-:537222017..537225375
Molecular Weight (calculated)
96941.5 Da
IEP (calculated)
5.783
GRAVY (calculated)
-0.313
Length
868 amino acids
Sequence
(BLAST)
(BLAST)
001: MLSAGGMVPG AGGLKGSLVL IPKKALDFHD FHGTAMDGGT DTELFGGRVT CQLISSTLRG RAAGKASRGE VGEEANLEPS LLLKKSLLSV PTGEETFEVT
101: FNWSMELGVP GAIIVKNNSD TEFYLKTITL DDVPGHGGAV VFVANSWVYP QAKYSYNRVF FANDTYLPHQ MPAALKPYRD DELRNLRGDD KQQEGPYEEH
201: DRVYRYDVYN DLGDARDVLG GSKHLPYPRR GRTGRKPSPN KPDHESWGET VYVPRDEQFG HLKADDFRDN TITALVGTIM PIICTLLDDT KGEFDTFGDI
301: LKLYTDGIEV RNIPVLEEEG NIPAQLQLQL VKDLITPMAL DDCLYKLKLP RPHIINEDEK AWMTDDEFAR EMLAGVNPLM IKRLTEFPPK STLDPSKYGD
401: HTSTITEAHI GERLEGLTVH QALTSNRLYI VDQHDNLMPF LININKLEGS FVYATRTLLF LRGNGTLAPV AIELSSPRLQ GDLTTAESTV YTPEDTGVEG
501: WIWQLAKAYV AVNDYGWHQL ISHWLNTHAV MEPFVIATNR QLSVTHPVHK LLHPHYRDTM NINAKARGLL ISANGVIEMT VFPGKHAMPM SSMVYKNWNF
601: TEQALPDDLI KRGMAVEDPS SPHKVRLLIE DYPYAADGLA VWHAIEQWVA DYLSIYYPND SVLQGDVELQ AWWKEVREVG HGDLKDAAWW PKMQTVAELI
701: KACATIIWIG SALHAAVNFG QYAYSGYHPN KPSMSRRPMP VPGSTEYAEL RDNPELAFIH TITSLFQALV GISLMEILSK HSSDEVYLGQ HDTPAWTSDA
801: KALEAFKRFG ARLVGIEKQV DDRNKDSRLK NRIGPAKFPY MLLFPNTSDH TGEAVGLSAK GIPNSISI
101: FNWSMELGVP GAIIVKNNSD TEFYLKTITL DDVPGHGGAV VFVANSWVYP QAKYSYNRVF FANDTYLPHQ MPAALKPYRD DELRNLRGDD KQQEGPYEEH
201: DRVYRYDVYN DLGDARDVLG GSKHLPYPRR GRTGRKPSPN KPDHESWGET VYVPRDEQFG HLKADDFRDN TITALVGTIM PIICTLLDDT KGEFDTFGDI
301: LKLYTDGIEV RNIPVLEEEG NIPAQLQLQL VKDLITPMAL DDCLYKLKLP RPHIINEDEK AWMTDDEFAR EMLAGVNPLM IKRLTEFPPK STLDPSKYGD
401: HTSTITEAHI GERLEGLTVH QALTSNRLYI VDQHDNLMPF LININKLEGS FVYATRTLLF LRGNGTLAPV AIELSSPRLQ GDLTTAESTV YTPEDTGVEG
501: WIWQLAKAYV AVNDYGWHQL ISHWLNTHAV MEPFVIATNR QLSVTHPVHK LLHPHYRDTM NINAKARGLL ISANGVIEMT VFPGKHAMPM SSMVYKNWNF
601: TEQALPDDLI KRGMAVEDPS SPHKVRLLIE DYPYAADGLA VWHAIEQWVA DYLSIYYPND SVLQGDVELQ AWWKEVREVG HGDLKDAAWW PKMQTVAELI
701: KACATIIWIG SALHAAVNFG QYAYSGYHPN KPSMSRRPMP VPGSTEYAEL RDNPELAFIH TITSLFQALV GISLMEILSK HSSDEVYLGQ HDTPAWTSDA
801: KALEAFKRFG ARLVGIEKQV DDRNKDSRLK NRIGPAKFPY MLLFPNTSDH TGEAVGLSAK GIPNSISI
001: MALAKELMGY PLITERSSLV SSASHFKKRT QSTQFSINPF DRRPRKTKSG VVAAISEDLV KTLRFSTTTG DRKSEEEEKA AVKFKVRAVV TVRNKNKEDL
101: KETLVKHLDA FADKIGRNIV LELISTQLDP KTKLPKKSNA AVLKDWSKKS KTKAERVHYT AEFTVDAAFG SPGAITVMNK HQKEFFLESI TIEGFALGPV
201: HFPCNSWVQS QKDHPDKRIF FTNQPYLPNE TPSGLRVLRE KELKNLRGDG SGVRKLSDRI YDFDVYNDLG NPDKSSELSR PKLGGKEVPY PRRCRTGRQS
301: TVSDKDAESR VEKPLPMYVP RDEQFEESKQ DTFAAGRLKA VLHHLIPSLK ASIVAEDFAD FGEIDRLYKE GLLLKLGFQD DIFKKFPLPK VVVDTLQEST
401: KGLLKYDTPK ILSKDKNAWL RDDEFARQAI AGINPVNIER VKTFPPVSNL DPKIYGPQHS ALTDDHIIGH LDGFSVQQAL EENRLYMLDY HDIFLPFLDR
501: INALDGRKAY ATRTIFFLTR LGTLKPVAIE LSLPPHGPKH RSKRVLTPPV DATSNWMWQL AKAHVSSNDA GVHQLVNHWL RTHACLEPFI LAAHRQLSAM
601: HPIFKLLDPH MRYTLEINAL ARQSLISADG VIEGGFTAGA YGMEMSAAAY KSSWRFDMEG LPADLIRRGM AIPDATQPHG LKLLIEDYPY ANDGLLLWSA
701: IQTWVRTYVE RYYPNPNLIK TDSELQSWYS ESINVGHADL RDADWWPELS TVDDLVSILT TLIWLASAQH AALNFGQYPY GGYVPNRPPL MRRLIPDESD
801: PEYASFISHP EKYYFSSMPS LAQTSKFMAV VDTLSTHSPD EEYIGERQQP SIWTGDAEIV EAFYGFAAEI GRIEKEIEKR NADPDRRNRC GAGVLPYELL
901: VPSSEPGVTC RGVPNSVSI
101: KETLVKHLDA FADKIGRNIV LELISTQLDP KTKLPKKSNA AVLKDWSKKS KTKAERVHYT AEFTVDAAFG SPGAITVMNK HQKEFFLESI TIEGFALGPV
201: HFPCNSWVQS QKDHPDKRIF FTNQPYLPNE TPSGLRVLRE KELKNLRGDG SGVRKLSDRI YDFDVYNDLG NPDKSSELSR PKLGGKEVPY PRRCRTGRQS
301: TVSDKDAESR VEKPLPMYVP RDEQFEESKQ DTFAAGRLKA VLHHLIPSLK ASIVAEDFAD FGEIDRLYKE GLLLKLGFQD DIFKKFPLPK VVVDTLQEST
401: KGLLKYDTPK ILSKDKNAWL RDDEFARQAI AGINPVNIER VKTFPPVSNL DPKIYGPQHS ALTDDHIIGH LDGFSVQQAL EENRLYMLDY HDIFLPFLDR
501: INALDGRKAY ATRTIFFLTR LGTLKPVAIE LSLPPHGPKH RSKRVLTPPV DATSNWMWQL AKAHVSSNDA GVHQLVNHWL RTHACLEPFI LAAHRQLSAM
601: HPIFKLLDPH MRYTLEINAL ARQSLISADG VIEGGFTAGA YGMEMSAAAY KSSWRFDMEG LPADLIRRGM AIPDATQPHG LKLLIEDYPY ANDGLLLWSA
701: IQTWVRTYVE RYYPNPNLIK TDSELQSWYS ESINVGHADL RDADWWPELS TVDDLVSILT TLIWLASAQH AALNFGQYPY GGYVPNRPPL MRRLIPDESD
801: PEYASFISHP EKYYFSSMPS LAQTSKFMAV VDTLSTHSPD EEYIGERQQP SIWTGDAEIV EAFYGFAAEI GRIEKEIEKR NADPDRRNRC GAGVLPYELL
901: VPSSEPGVTC RGVPNSVSI
Arabidopsis Description
LOX3Lipoxygenase 3, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9LNR3]
SUBAcon: [plastid,cytosol]
SUBAcon: [plastid,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.