Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion, cytosol
Predictor Summary:
Predictor Summary:
- mitochondrion 2
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH62403 | Soybean | cytosol, endoplasmic reticulum | 25.41 | 54.63 |
| KRH16725 | Soybean | cytosol | 24.8 | 52.38 |
| KRH35534 | Soybean | cytosol | 47.95 | 52.23 |
| KRH62399 | Soybean | cytosol, endoplasmic reticulum | 25.0 | 51.69 |
| KRH57987 | Soybean | cytosol | 26.02 | 49.22 |
| PGSC0003DMT400063654 | Potato | cytosol | 46.93 | 46.64 |
| KRH13357 | Soybean | endoplasmic reticulum | 22.95 | 46.28 |
| CDY70916 | Canola | cytosol | 47.54 | 46.03 |
| HORVU5Hr1G117110.1 | Barley | cytosol | 81.76 | 44.98 |
| HORVU5Hr1G055110.2 | Barley | mitochondrion | 30.53 | 42.21 |
| HORVU5Hr1G093700.3 | Barley | cytosol, plasma membrane | 72.34 | 40.86 |
| HORVU5Hr1G093770.1 | Barley | cytosol | 64.55 | 36.5 |
| Solyc01g099170.2.1 | Tomato | cytosol, mitochondrion | 37.91 | 36.2 |
| Os03t0738600-01 | Rice | plasma membrane, plastid | 62.91 | 35.29 |
| Zm00001d042541_P002 | Maize | cytosol | 62.91 | 34.73 |
| EES04025 | Sorghum | cytosol | 61.68 | 34.68 |
| EES04028 | Sorghum | cytosol | 61.48 | 34.36 |
| Zm00001d042540_P008 | Maize | cytosol | 61.89 | 33.86 |
| HORVU4Hr1G005920.1 | Barley | cytosol, plasma membrane | 58.81 | 32.69 |
| Solyc08g029000.2.1 | Tomato | cytosol, extracellular, nucleus | 53.48 | 30.31 |
| PGSC0003DMT400028158 | Potato | cytosol | 53.28 | 30.16 |
| Solyc08g014000.2.1 | Tomato | cytosol, nucleus, plastid | 52.87 | 30.0 |
| PGSC0003DMT400054145 | Potato | cytosol | 52.66 | 29.95 |
| VIT_14s0128g00780.t01 | Wine grape | cytosol | 52.25 | 29.69 |
| VIT_14s0128g00790.t01 | Wine grape | cytosol | 52.46 | 29.46 |
| GSMUA_Achr1P22970_001 | Banana | cytosol | 50.82 | 29.31 |
| Solyc09g075860.2.1 | Tomato | cytosol, nucleus | 52.66 | 29.3 |
| Solyc01g099200.2.1 | Tomato | cytosol, plastid | 50.41 | 29.25 |
| VIT_05s0020g03170.t01 | Wine grape | cytosol | 52.46 | 29.22 |
| PGSC0003DMT400081370 | Potato | cytosol | 52.46 | 29.19 |
| Bra021322.1-P | Field mustard | cytosol | 51.23 | 29.17 |
| Solyc01g099160.2.1 | Tomato | cytosol, extracellular, nucleus | 51.43 | 29.12 |
| PGSC0003DMT400063469 | Potato | cytosol | 50.2 | 29.06 |
| Solyc01g099180.2.1 | Tomato | cytosol | 50.41 | 28.81 |
| KRG91271 | Soybean | cytosol | 50.61 | 28.79 |
| PGSC0003DMT400063446 | Potato | cytosol | 47.34 | 28.73 |
| PGSC0003DMT400063477 | Potato | cytosol | 50.0 | 28.5 |
| KRH10053 | Soybean | endoplasmic reticulum | 49.8 | 28.49 |
| Solyc09g075870.1.1 | Tomato | cytosol | 49.8 | 28.45 |
| AT1G55020.1 | Thale cress | cytosol | 50.0 | 28.41 |
| Solyc01g099210.2.1 | Tomato | cytosol | 50.2 | 28.39 |
| KRH44094 | Soybean | endoplasmic reticulum | 50.41 | 28.37 |
| KRH23268 | Soybean | endoplasmic reticulum | 49.59 | 28.37 |
| KRH10050 | Soybean | endoplasmic reticulum | 49.8 | 28.35 |
| KRH68548 | Soybean | cytosol | 49.8 | 28.32 |
| KRH47066 | Soybean | endoplasmic reticulum, nucleus | 49.59 | 28.17 |
| KRH10051 | Soybean | endoplasmic reticulum, nucleus | 49.39 | 28.15 |
| KRH44090 | Soybean | endoplasmic reticulum | 49.39 | 28.02 |
| AT3G22400.1 | Thale cress | cytosol | 50.61 | 27.88 |
| KRH33939 | Soybean | cytosol, endoplasmic reticulum | 49.39 | 27.86 |
| Bra039948.1-P | Field mustard | cytosol | 50.61 | 27.85 |
| KRH23266 | Soybean | cytosol | 47.13 | 27.84 |
| KRH44095 | Soybean | endoplasmic reticulum | 49.18 | 27.71 |
| KRH23265 | Soybean | endoplasmic reticulum, nucleus | 49.18 | 27.71 |
| CDY46325 | Canola | cytosol | 50.0 | 27.66 |
| HORVU3Hr1G047210.1 | Barley | cytosol | 12.3 | 27.65 |
| CDY38326 | Canola | cytosol | 50.0 | 27.51 |
| KRH23269 | Soybean | endoplasmic reticulum | 46.11 | 27.37 |
| KRH47067 | Soybean | endoplasmic reticulum | 48.36 | 27.31 |
| KRH44093 | Soybean | endoplasmic reticulum | 47.34 | 27.3 |
| KRH47522 | Soybean | endoplasmic reticulum, nucleus | 48.36 | 27.28 |
| Solyc01g099190.2.1 | Tomato | cytosol, extracellular, nucleus, plastid | 47.95 | 27.27 |
| Bra023829.1-P | Field mustard | cytosol | 50.41 | 27.24 |
| KRH44092 | Soybean | nucleus | 47.75 | 27.19 |
| CDY64191 | Canola | cytosol | 50.41 | 27.12 |
| KRH47525 | Soybean | endoplasmic reticulum | 48.16 | 27.07 |
| KRH44097 | Soybean | cytosol, endoplasmic reticulum | 48.16 | 27.07 |
| PGSC0003DMT400063452 | Potato | cytosol | 42.42 | 25.91 |
| HORVU1Hr1G054390.4 | Barley | cytosol | 43.85 | 25.36 |
| Solyc01g099150.2.1 | Tomato | nucleus | 39.75 | 22.51 |
| PGSC0003DMT400063461 | Potato | cytosol | 30.94 | 21.76 |
| HORVU7Hr1G050680.1 | Barley | peroxisome | 29.71 | 21.2 |
| HORVU2Hr1G115980.2 | Barley | plastid | 37.91 | 20.98 |
| CDY43490 | Canola | cytosol, plasma membrane | 50.82 | 20.62 |
| HORVU4Hr1G076570.6 | Barley | cytosol, plastid | 37.7 | 20.09 |
| HORVU6Hr1G033600.1 | Barley | plastid | 36.68 | 19.98 |
| HORVU5Hr1G001180.1 | Barley | plastid | 37.91 | 19.87 |
| HORVU2Hr1G115960.1 | Barley | plastid | 37.5 | 19.78 |
| HORVU6Hr1G000510.1 | Barley | plastid | 37.7 | 19.74 |
| HORVU7Hr1G006320.4 | Barley | plastid | 36.89 | 19.42 |
| KRH47069 | Soybean | endoplasmic reticulum | 16.6 | 17.8 |
| KRH47064 | Soybean | endoplasmic reticulum | 14.55 | 12.46 |
| KRG88464 | Soybean | cytosol | 5.74 | 6.14 |
| VIT_06s0004g01580.t01 | Wine grape | cytosol | 3.69 | 5.37 |
Protein Annotations
| Gene3D:1.20.245.10 | MapMan:50.1.12 | UniProt:A0A287R9R9 | ncoils:Coil | GO:GO:0003674 | GO:GO:0003824 |
| GO:GO:0005488 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0016491 | GO:GO:0016702 | GO:GO:0046872 |
| GO:GO:0051213 | GO:GO:0055114 | EnsemblPlantsGene:HORVU5Hr1G054200 | EnsemblPlants:HORVU5Hr1G054200.1 | InterPro:IPR013819 | InterPro:LipOase |
| InterPro:LipOase_C | InterPro:LipOase_C_sf | InterPro:LipOase_Fe_BS | PFAM:PF00305 | PRINTS:PR00087 | ScanProsite:PS00711 |
| PFscan:PS51393 | PANTHER:PTHR11771 | PANTHER:PTHR11771:SF54 | SUPFAM:SSF48484 | UniParc:UPI000B47F688 | SEG:seg |
Description
No Description!
Coordinates
chrchr5H:-:425795969..425797570
Molecular Weight (calculated)
50125.8 Da
IEP (calculated)
6.772
GRAVY (calculated)
-0.321
Length
488 amino acids
Sequence
(BLAST)
(BLAST)
001: HVRGNVVPPA FHHGMSDRLL PCRFSHKRKE IMHYLLDAAI RQPPVRPESC RFAITQHTPR CRSVYPXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXQ
101: GDLTTAESTV YTPEDAGVEG WIWQLAKAYV SVNDYGWHQL ISHWLNTHAV MEPFVIATNR QLSVTHPVHK LLHLHYRDTM NINSRARGML INADGVIEKT
201: VFPGKHAMPM SSMVYKNWNF TEQALPDDLI KRGMAVEDPS SPHKVRLLIE DYPYAADGLA VWHAIEQWVA DYLTIYYPDD GVLQGDVELQ AWWKEVREVG
301: HGDLKDAAWW PEMQTVAELI KSCATIIWIG SALHAAVNFG QYAYSGYHPN KPSMSRRPMP VPGSKEYAEL SSDPERAYIH TITSLFQALV GISLMEILSK
401: HSSDEVYLGQ HDTPEWTSDA KALEAFKRFG ARLVGIEKQV MDMNEDTRLK NRIGPAKFPY MLLFPNTSDH TGEAXXXXXX XXXXXXXX
101: GDLTTAESTV YTPEDAGVEG WIWQLAKAYV SVNDYGWHQL ISHWLNTHAV MEPFVIATNR QLSVTHPVHK LLHLHYRDTM NINSRARGML INADGVIEKT
201: VFPGKHAMPM SSMVYKNWNF TEQALPDDLI KRGMAVEDPS SPHKVRLLIE DYPYAADGLA VWHAIEQWVA DYLTIYYPDD GVLQGDVELQ AWWKEVREVG
301: HGDLKDAAWW PEMQTVAELI KSCATIIWIG SALHAAVNFG QYAYSGYHPN KPSMSRRPMP VPGSKEYAEL SSDPERAYIH TITSLFQALV GISLMEILSK
401: HSSDEVYLGQ HDTPEWTSDA KALEAFKRFG ARLVGIEKQV MDMNEDTRLK NRIGPAKFPY MLLFPNTSDH TGEAXXXXXX XXXXXXXX
001: MALAKELMGY PLITERSSLV SSASHFKKRT QSTQFSINPF DRRPRKTKSG VVAAISEDLV KTLRFSTTTG DRKSEEEEKA AVKFKVRAVV TVRNKNKEDL
101: KETLVKHLDA FADKIGRNIV LELISTQLDP KTKLPKKSNA AVLKDWSKKS KTKAERVHYT AEFTVDAAFG SPGAITVMNK HQKEFFLESI TIEGFALGPV
201: HFPCNSWVQS QKDHPDKRIF FTNQPYLPNE TPSGLRVLRE KELKNLRGDG SGVRKLSDRI YDFDVYNDLG NPDKSSELSR PKLGGKEVPY PRRCRTGRQS
301: TVSDKDAESR VEKPLPMYVP RDEQFEESKQ DTFAAGRLKA VLHHLIPSLK ASIVAEDFAD FGEIDRLYKE GLLLKLGFQD DIFKKFPLPK VVVDTLQEST
401: KGLLKYDTPK ILSKDKNAWL RDDEFARQAI AGINPVNIER VKTFPPVSNL DPKIYGPQHS ALTDDHIIGH LDGFSVQQAL EENRLYMLDY HDIFLPFLDR
501: INALDGRKAY ATRTIFFLTR LGTLKPVAIE LSLPPHGPKH RSKRVLTPPV DATSNWMWQL AKAHVSSNDA GVHQLVNHWL RTHACLEPFI LAAHRQLSAM
601: HPIFKLLDPH MRYTLEINAL ARQSLISADG VIEGGFTAGA YGMEMSAAAY KSSWRFDMEG LPADLIRRGM AIPDATQPHG LKLLIEDYPY ANDGLLLWSA
701: IQTWVRTYVE RYYPNPNLIK TDSELQSWYS ESINVGHADL RDADWWPELS TVDDLVSILT TLIWLASAQH AALNFGQYPY GGYVPNRPPL MRRLIPDESD
801: PEYASFISHP EKYYFSSMPS LAQTSKFMAV VDTLSTHSPD EEYIGERQQP SIWTGDAEIV EAFYGFAAEI GRIEKEIEKR NADPDRRNRC GAGVLPYELL
901: VPSSEPGVTC RGVPNSVSI
101: KETLVKHLDA FADKIGRNIV LELISTQLDP KTKLPKKSNA AVLKDWSKKS KTKAERVHYT AEFTVDAAFG SPGAITVMNK HQKEFFLESI TIEGFALGPV
201: HFPCNSWVQS QKDHPDKRIF FTNQPYLPNE TPSGLRVLRE KELKNLRGDG SGVRKLSDRI YDFDVYNDLG NPDKSSELSR PKLGGKEVPY PRRCRTGRQS
301: TVSDKDAESR VEKPLPMYVP RDEQFEESKQ DTFAAGRLKA VLHHLIPSLK ASIVAEDFAD FGEIDRLYKE GLLLKLGFQD DIFKKFPLPK VVVDTLQEST
401: KGLLKYDTPK ILSKDKNAWL RDDEFARQAI AGINPVNIER VKTFPPVSNL DPKIYGPQHS ALTDDHIIGH LDGFSVQQAL EENRLYMLDY HDIFLPFLDR
501: INALDGRKAY ATRTIFFLTR LGTLKPVAIE LSLPPHGPKH RSKRVLTPPV DATSNWMWQL AKAHVSSNDA GVHQLVNHWL RTHACLEPFI LAAHRQLSAM
601: HPIFKLLDPH MRYTLEINAL ARQSLISADG VIEGGFTAGA YGMEMSAAAY KSSWRFDMEG LPADLIRRGM AIPDATQPHG LKLLIEDYPY ANDGLLLWSA
701: IQTWVRTYVE RYYPNPNLIK TDSELQSWYS ESINVGHADL RDADWWPELS TVDDLVSILT TLIWLASAQH AALNFGQYPY GGYVPNRPPL MRRLIPDESD
801: PEYASFISHP EKYYFSSMPS LAQTSKFMAV VDTLSTHSPD EEYIGERQQP SIWTGDAEIV EAFYGFAAEI GRIEKEIEKR NADPDRRNRC GAGVLPYELL
901: VPSSEPGVTC RGVPNSVSI
Arabidopsis Description
LOX3Lipoxygenase 3, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9LNR3]
SUBAcon: [plastid,cytosol]
SUBAcon: [plastid,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.