Factsheet for HORVU4Hr1G076570.6

Subcellular Localization

min:

: max

Winner_takes_all: plastid, cytosol

Predictor Summary:

mitochondrion 2
plastid 2
cytosol 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, plastid
Any Predictor:	cytosol, mitochondrion, plastid
iPSORT:	mitochondrion
MultiLoc:	mitochondrion
Predotar:	plastid
TargetP:	plastid
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
HORVU4Hr1G035250.1

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G17420.1	HORVU4Hr1G035250.1	AT4G26630.1	25387881

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU5Hr1G055110.2	Barley	mitochondrion	37.99	98.58
TraesCS4D01G294100.1	Wheat	plastid	96.51	95.88
TraesCS4A01G009400.1	Wheat	plastid	96.07	95.34
TraesCS4B01G295200.1	Wheat	plastid	95.74	95.02
Os03t0179900-01	Rice	plastid	84.61	84.42
EER95400	Sorghum	mitochondrion	83.95	83.23
Zm00001d027893_P001	Maize	plastid	83.52	79.03
GSMUA_Achr10P...	Banana	cytosol	68.12	70.91
VIT_00s0265g00170.t01	Wine grape	cytosol	35.59	64.55
Solyc03g122340.2.1	Tomato	cytosol	62.88	63.44
PGSC0003DMT400058933	Potato	plastid	63.1	63.24
VIT_09s0002g01080.t01	Wine grape	cytosol	62.66	61.92
CDY21750	Canola	cytosol, mitochondrion, plastid	61.9	61.7
AT1G17420.1	Thale cress	cytosol, plastid	61.46	61.26
Bra030988.1-P	Field mustard	cytosol, mitochondrion, plastid	61.46	61.26
KRH06197	Soybean	nucleus	61.57	61.17
CDX81825	Canola	cytosol	61.35	61.15
CDY64617	Canola	cytosol	61.14	60.94
KRH47615	Soybean	nucleus	61.57	60.84
CDX96769	Canola	cytosol	60.81	60.61
Bra016602.1-P	Field mustard	cytosol	60.81	60.61
AT1G72520.1	Thale cress	plastid	61.24	60.58
KRG97300	Soybean	plastid	59.28	60.4
KRH69027	Soybean	plastid	59.17	60.16
Bra008037.1-P	Field mustard	plastid	59.61	59.41
CDY49853	Canola	plastid	59.5	59.3
CDX82146	Canola	plastid	55.02	59.29
HORVU3Hr1G047210.1	Barley	cytosol	12.55	53.0
KRH10882	Soybean	cytosol	24.34	51.38
KRH21441	Soybean	cytosol	48.25	48.57
KRH50048	Soybean	cytosol	47.49	47.8
HORVU7Hr1G050680.1	Barley	peroxisome	31.99	42.84
HORVU6Hr1G033600.1	Barley	plastid	41.38	42.3
HORVU5Hr1G093700.3	Barley	cytosol, plasma membrane	38.76	41.09
HORVU5Hr1G093770.1	Barley	cytosol	38.54	40.9
HORVU4Hr1G005920.1	Barley	cytosol, plasma membrane	39.19	40.89
HORVU1Hr1G054390.4	Barley	cytosol	37.23	40.4
HORVU5Hr1G001180.1	Barley	plastid	41.05	40.39
HORVU6Hr1G000510.1	Barley	plastid	40.39	39.7
HORVU5Hr1G117110.1	Barley	cytosol	37.45	38.67
HORVU7Hr1G006320.4	Barley	plastid	38.97	38.51
HORVU5Hr1G054200.1	Barley	cytosol, mitochondrion	20.09	37.7
HORVU2Hr1G115980.2	Barley	plastid	34.72	36.05
HORVU2Hr1G115960.1	Barley	plastid	35.15	34.81

Protein Annotations

Gene3D:1.20.245.10	MapMan:11.7.1.2	Gene3D:2.60.60.20	Gene3D:3.10.450.60	Gene3D:4.10.372.10	Gene3D:4.10.375.10
UniProt:A0A287PQH8	ncoils:Coil	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0005515
GO:GO:0006629	GO:GO:0006633	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987
GO:GO:0016491	GO:GO:0016702	GO:GO:0031408	GO:GO:0046872	GO:GO:0051213	GO:GO:0055114
EnsemblPlantsGene:HORVU4Hr1G076570	EnsemblPlants:HORVU4Hr1G076570.6	InterPro:IPR001024	InterPro:IPR013819	InterPro:IPR027433	InterPro:LipOase
InterPro:LipOase_C	InterPro:LipOase_CS	InterPro:LipOase_C_sf	InterPro:LipOase_Fe_BS	InterPro:LipOase_plant	InterPro:Lipoxygenase_dom_3
PFAM:PF00305	PFAM:PF01477	InterPro:PLAT/LH2_dom	InterPro:PLAT/LH2_dom_sf	PRINTS:PR00087	PRINTS:PR00468
ScanProsite:PS00081	ScanProsite:PS00711	PFscan:PS50095	PFscan:PS51393	PANTHER:PTHR11771	PANTHER:PTHR11771:SF67
SMART:SM00308	SUPFAM:SSF48484	SUPFAM:SSF49723	UniParc:UPI000B4783CB	SEG:seg	:

Description

Lipoxygenase [Source:UniProtKB/TrEMBL;Acc:A0A287PQH8]

Coordinates

chrchr4H:+:601100436..601108113

Molecular Weight (calculated)

101468.0 Da

IEP (calculated)

6.945

GRAVY (calculated)

-0.309

Length

916 amino acids

Sequence
(BLAST)

001: MAASCRELAG LVRPAATASS QPGRGRNELC FAPLRQEGRG RGRRGAKVVV AAVSEELPRL ASAGKGAGRP PQGKVALRAA LTVRRKQKED LKEAVAGHLD
101: ALWDMVGRGV LLDLISTKID PRTKKAVRSG GASIKDWCQK QGAKGEHVVY TAEFTVDAGF GEPGAVVVAN RHHREFFLES IVVEGALPCG TVYFDCNSWV
201: QTTGELPGDA NRVFFSNKPY LPSQTPPGLR EIREKVLRDL RGDGTGVRKI SDQIYDYAMY NDLGNPDRGK EFIRPILGGE KIPYPRRCRT GRPPTDTNML
301: SESRVEKPHR IYVPRDETFE ELKQGAFISG RLRAVLHTLI PSLIASISAD THNFQGFHHV DNLYKEGLRL KLGLQEHLFQ KIPFVQKIQE SSEGMLRYDT
401: PSILSKDKFA WLRDDEFARQ AIAGINPVSI ERLKVFPPVS KLDPAIYGPS ESSITERHIV GQLNGLTVQE AIDKEKLFIV DHHDVYMPFL DRINAIEGRK
501: AYATRALFFL TQGGTLKPIA IELSLPPTQS GEPQPSKVLT PACDATSNWI WMLGKAHVSS NDAGVHQLVN HWLRTHAIME PFILAAHRRM SAMHPIFKLL
601: HPHMRYTLEI NALARQSLIN AEGVIESCFT PGPVSGEISS AYYSNHWRFD LEGLPADLLR RGVAVEDSTQ PHGIRLLIED YPYANDGLLL WSAIGNWVES
701: YVKLYYPDAG TVQSDDELQE WYHESIHVGH ADLAGAPWWP PLSTPRDLAA ILTTLVWLAS AQHAALNFGQ YPLGGYVPNR PPLMRRLLPD PERDAAEYAM
801: FLADPHRFFL NAMPGVLEAT KFMAVVDTLS THSPDEEYLG ESLDEGAAPW TGDEEALEAH GMFAADVRRA EETIEGRNAD HGRRNRCGAG VLPYELLAPS
901: SPPGVTCRGV PNSISI

Best Arabidopsis Sequence Match ( AT1G72520.1 )
(BLAST)

001: MALANEIMGS RLIFERSSSL ASPFHSRFSI KKKTQRTQFS INPFDPRPMR AVNSSGVVAA ISEDLVKTLR ISTVGRKQEK EEEEEKSVKF KVRAVATVRN
101: KNKEDFKETL VKHLDAFTDK IGRNVVLELM STQVDPKTNE PKKSKAAVLK DWSKKSNSKA ERVHYTAEFT VDSAFGSPGA ITVTNKHQKE FFLESITIEG
201: FACGPVHFPC NSWVQSQKDH PSKRILFTNQ PYLPSETPSG LRTLREKELE NLRGNGKGER KLSDRIYDYD VYNDIGNPDI SRELARPTLG GREFPYPRRC
301: RTGRSSTDTD MMSERRVEKP LPMYVPRDEQ FEESKQNTFA ACRLKAVLHN LIPSLKASIL AEDFANFGEI DSLYKEGLLL KLGFQDDMFK KFPLPKIVTT
401: LQKSSEGLLR YDTPKIVSKD KYAWLRDDEF ARQAIAGINP VNIERVTSYP PVSNLDPEIY GPGLHSALTE DHIIGQLDGL TVQQALETNR LFMVDYHDIY
501: LPFLDRINAL DGRKAYATRT ILFLTRLGTL KPIAIELSLP SQSSSNQKSK RVVTPPVDAT SNWMWQLAKA HVGSNDAGVH QLVNHWLRTH ACLEPFILAA
601: HRQLSAMHPI FKLLDPHMRY TLEINAVARQ TLISADGVIE SCFTAGQYGL EISSAAYKNK WRFDMEGLPA DLIRRGMAVP DPTQPHGLKL LVEDYPYAND
701: GLLLWSAIQT WVRTYVERYY ANSNLIQTDT ELQAWYSESI NVGHADHRDA EWWPKLSTVE DLVSVITTII WLASAQHAAL NFGQYPYGGY VPNRPPLMRR
801: LIPDESDPEF TSFIEDPQKY FFSSMPSLLQ TTKFMAVVDT LSTHSPDEEY IGERQQPSIW TGDAEIVDAF YGFSAEIGRI EKEIDKRNRD PSRRNRCGAG
901: VLPYELMAPS SEPGVTCRGV PNSVSI

Arabidopsis Description

LOX4Lipoxygenase 4, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9FNX8]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.