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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: plastid

Predictor Summary:
  • plastid 5
  • mitochondrion 2
  • cytosol 2
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY49853 Canola plastid 99.18 91.73
AT1G72520.1 Thale cress plastid 92.24 84.67
CDY64617 Canola cytosol 82.24 76.06
CDX96769 Canola cytosol 81.76 75.63
CDY21750 Canola cytosol, mitochondrion, plastid 81.53 75.41
CDX81825 Canola cytosol 81.41 75.3
Solyc03g122340.2.1 Tomato cytosol 72.0 67.4
PGSC0003DMT400058933 Potato plastid 72.47 67.4
KRH06197 Soybean nucleus 70.94 65.4
KRH47615 Soybean nucleus 70.82 64.94
VIT_09s0002g01080.t01 Wine grape cytosol 70.12 64.29
KRH69027 Soybean plastid 67.41 63.6
KRG97300 Soybean plastid 66.82 63.18
GSMUA_Achr9P16020_001 Banana plastid 63.06 61.19
GSMUA_Achr3P07870_001 Banana plastid 62.82 60.75
GSMUA_Achr8P22700_001 Banana plastid 59.65 59.79
GSMUA_Achr10P... Banana cytosol 61.65 59.55
Os04t0447100-01 Rice cytosol 54.94 58.67
Os03t0179900-01 Rice plastid 60.94 56.43
EER95400 Sorghum mitochondrion 61.29 56.39
TraesCS4B01G295200.1 Wheat plastid 59.88 55.15
HORVU4Hr1G076570.6 Barley cytosol, plastid 59.29 55.02
HORVU5Hr1G055110.2 Barley mitochondrion 22.82 54.96
TraesCS2B01G333600.1 Wheat plastid 59.18 54.85
TraesCS2D01G313400.1 Wheat plastid 58.47 54.62
TraesCS4A01G009400.1 Wheat plastid 59.18 54.5
TraesCS4D01G294100.1 Wheat plastid 59.06 54.45
EES10882 Sorghum plastid 58.35 53.68
TraesCS2A01G315100.2 Wheat plastid 58.94 53.3
Zm00001d027893_P001 Maize plastid 60.47 53.1
Zm00001d025524_P001 Maize plastid 57.18 52.31
Zm00001d003533_P001 Maize plastid 57.88 52.28
CDY70843 Canola cytosol 6.82 46.03
CDY61034 Canola cytosol 24.12 45.86
CDY07409 Canola cytosol 20.47 44.96
CDY51606 Canola plastid 48.12 44.8
CDY12655 Canola plastid 47.88 44.58
CDY07417 Canola plastid 47.53 44.01
CDY70916 Canola cytosol 25.65 43.25
CDY61881 Canola cytosol 17.53 41.97
CDY72550 Canola cytosol 15.76 41.74
CDX91565 Canola plastid 41.88 39.56
CDY04196 Canola plastid 41.29 39.48
CDY61036 Canola plastid 41.06 39.26
CDX67920 Canola plastid 41.65 39.16
CDX79416 Canola plastid 41.29 38.83
CDY16339 Canola plastid 34.24 38.24
CDY46325 Canola cytosol 39.06 37.64
CDY38326 Canola cytosol 38.82 37.2
CDY61880 Canola plastid 23.76 36.66
CDY64191 Canola cytosol 39.06 36.6
CDY28879 Canola cytosol, endoplasmic reticulum, plastid 47.41 35.98
CDY70245 Canola plastid 18.0 33.41
CDY07408 Canola plastid 17.76 32.97
CDY07407 Canola cytosol, plastid 41.76 32.36
CDY70606 Canola plastid 14.94 32.15
CDY61882 Canola plastid 14.35 31.52
CDY43490 Canola cytosol, plasma membrane 39.76 28.1
Protein Annotations
Gene3D:1.20.245.10Gene3D:2.60.60.20Gene3D:3.10.450.60Gene3D:4.10.372.10Gene3D:4.10.375.10MapMan:50.1.12
GO:A0A078CY99EnsemblPlants:CDX82146ProteinID:CDX82146ProteinID:CDX82146.1GO:GO:0003674GO:GO:0003824
GO:GO:0005488GO:GO:0005515GO:GO:0006629GO:GO:0008150GO:GO:0008152GO:GO:0009058
GO:GO:0009987GO:GO:0016491GO:GO:0016702GO:GO:0031408GO:GO:0046872GO:GO:0055114
EnsemblPlantsGene:GSBRNA2T00137200001InterPro:IPR001024InterPro:IPR013819InterPro:IPR027433InterPro:LipOaseInterPro:LipOase_C
InterPro:LipOase_CSInterPro:LipOase_C_sfInterPro:LipOase_Fe_BSInterPro:LipOase_plantInterPro:Lipoxygenase_dom_3PFAM:PF00305
PFAM:PF01477InterPro:PLAT/LH2_domInterPro:PLAT/LH2_dom_sfPRINTS:PR00087PRINTS:PR00468ScanProsite:PS00081
ScanProsite:PS00711PFscan:PS50095PFscan:PS51393PANTHER:PTHR11771PANTHER:PTHR11771:SF67SMART:SM00308
SUPFAM:SSF48484SUPFAM:SSF49723UniPathway:UPA00382UniParc:UPI0004EEF9B0::
Description
BnaC02g21440D
Coordinates
chrLK031827:-:1123604..1127252
Molecular Weight (calculated)
95952.5 Da
IEP (calculated)
7.858
GRAVY (calculated)
-0.418
Length
850 amino acids
Sequence
(BLAST)
001: MALAKEIMGS RLIFERSSSL ASSPFQSRLS IKKKTQRTQL SINPFDLRPM KAAISGGVVA AISEDLVKTL RFNTLGRNQE NEEVEKAVQF KVRAVVTVRN
101: KNKEDFKETL VKHLDAFTDK IGRNVVLELI SIQVDPKTNE PKKSKPAILK DWSKKSNSKA EKVHYAAEFT VDSAFGLPGA ITVTNKHQKE FFLENITIEG
201: FACGPVHFPC NSWVQSQNDH PSKRIFFTNQ PYLPSETPSG LRTLREQELE NLRGNGKGER KLSDRIYDFD VYNDIGNPDI STELARPVFG GREFPYPRRC
301: RTGRRSSDTD LMSERRVEKP LPMYVPRDEQ FEESKKNTFA ACRLKAVLHN LVPSLKASIL AEDFANFGEI DSLYKEGLLL KLGIQDDMFK KFPLPKIVTT
401: LQKSSEGLLR YDTPKIVSKD KYAWLRDDEF ARQAIAGINP VNIERVTTYP PVSNLDREIY GSHLDSALTE DHIIGHLDGL SVQQALETNR LFMVDYHDTY
501: LPFLDRINAL DRRKAYATRT ILFLTRLGTL KPVAIELSLP KSKRVVTPPI DATSNWTWQL AKAHVGSNDA GVHQLVNHWL RTHACLEPFI LAAHRQLSAL
601: HPIYKLLDPH MRYTLEINAV ARQTLVSADG VIESCFTAGQ YGLEISAAAY KNQWRFDMEG LPADLIRRGM AVPDPTQPHG LKLLVEDYPY ANDVWLASAQ
701: HAALNFGQYP YGGYVPNRPP LMRQLIPDES EPEFASFVED PQKYFFSSLP SLLQTTKFMA VVDTLSTHSP DEEYIGERQQ PSIWTGDAEI VDAFYGFSAE
801: IGRIEQEIEK RNKDPSRRNR CGAGVLPYEL MAPSSEPGVT CRGVPNSVSI
Best Arabidopsis Sequence Match ( AT1G17420.1 )
(BLAST)
001: MALAKELMGY PLITERSSLV SSASHFKKRT QSTQFSINPF DRRPRKTKSG VVAAISEDLV KTLRFSTTTG DRKSEEEEKA AVKFKVRAVV TVRNKNKEDL
101: KETLVKHLDA FADKIGRNIV LELISTQLDP KTKLPKKSNA AVLKDWSKKS KTKAERVHYT AEFTVDAAFG SPGAITVMNK HQKEFFLESI TIEGFALGPV
201: HFPCNSWVQS QKDHPDKRIF FTNQPYLPNE TPSGLRVLRE KELKNLRGDG SGVRKLSDRI YDFDVYNDLG NPDKSSELSR PKLGGKEVPY PRRCRTGRQS
301: TVSDKDAESR VEKPLPMYVP RDEQFEESKQ DTFAAGRLKA VLHHLIPSLK ASIVAEDFAD FGEIDRLYKE GLLLKLGFQD DIFKKFPLPK VVVDTLQEST
401: KGLLKYDTPK ILSKDKNAWL RDDEFARQAI AGINPVNIER VKTFPPVSNL DPKIYGPQHS ALTDDHIIGH LDGFSVQQAL EENRLYMLDY HDIFLPFLDR
501: INALDGRKAY ATRTIFFLTR LGTLKPVAIE LSLPPHGPKH RSKRVLTPPV DATSNWMWQL AKAHVSSNDA GVHQLVNHWL RTHACLEPFI LAAHRQLSAM
601: HPIFKLLDPH MRYTLEINAL ARQSLISADG VIEGGFTAGA YGMEMSAAAY KSSWRFDMEG LPADLIRRGM AIPDATQPHG LKLLIEDYPY ANDGLLLWSA
701: IQTWVRTYVE RYYPNPNLIK TDSELQSWYS ESINVGHADL RDADWWPELS TVDDLVSILT TLIWLASAQH AALNFGQYPY GGYVPNRPPL MRRLIPDESD
801: PEYASFISHP EKYYFSSMPS LAQTSKFMAV VDTLSTHSPD EEYIGERQQP SIWTGDAEIV EAFYGFAAEI GRIEKEIEKR NADPDRRNRC GAGVLPYELL
901: VPSSEPGVTC RGVPNSVSI
Arabidopsis Description
LOX3Lipoxygenase 3, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9LNR3]
SUBAcon: [plastid,cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.