Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 5
- mitochondrion 2
- cytosol 2
Predictors | GFP | MS/MS | Papers |
---|---|---|---|
PPI
No PPI Data
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
CDY49853 | Canola | plastid | 99.18 | 91.73 |
AT1G72520.1 | Thale cress | plastid | 92.24 | 84.67 |
CDY64617 | Canola | cytosol | 82.24 | 76.06 |
CDX96769 | Canola | cytosol | 81.76 | 75.63 |
CDY21750 | Canola | cytosol, mitochondrion, plastid | 81.53 | 75.41 |
CDX81825 | Canola | cytosol | 81.41 | 75.3 |
Solyc03g122340.2.1 | Tomato | cytosol | 72.0 | 67.4 |
PGSC0003DMT400058933 | Potato | plastid | 72.47 | 67.4 |
KRH06197 | Soybean | nucleus | 70.94 | 65.4 |
KRH47615 | Soybean | nucleus | 70.82 | 64.94 |
VIT_09s0002g01080.t01 | Wine grape | cytosol | 70.12 | 64.29 |
KRH69027 | Soybean | plastid | 67.41 | 63.6 |
KRG97300 | Soybean | plastid | 66.82 | 63.18 |
GSMUA_Achr9P16020_001 | Banana | plastid | 63.06 | 61.19 |
GSMUA_Achr3P07870_001 | Banana | plastid | 62.82 | 60.75 |
GSMUA_Achr8P22700_001 | Banana | plastid | 59.65 | 59.79 |
GSMUA_Achr10P... | Banana | cytosol | 61.65 | 59.55 |
Os04t0447100-01 | Rice | cytosol | 54.94 | 58.67 |
Os03t0179900-01 | Rice | plastid | 60.94 | 56.43 |
EER95400 | Sorghum | mitochondrion | 61.29 | 56.39 |
TraesCS4B01G295200.1 | Wheat | plastid | 59.88 | 55.15 |
HORVU4Hr1G076570.6 | Barley | cytosol, plastid | 59.29 | 55.02 |
HORVU5Hr1G055110.2 | Barley | mitochondrion | 22.82 | 54.96 |
TraesCS2B01G333600.1 | Wheat | plastid | 59.18 | 54.85 |
TraesCS2D01G313400.1 | Wheat | plastid | 58.47 | 54.62 |
TraesCS4A01G009400.1 | Wheat | plastid | 59.18 | 54.5 |
TraesCS4D01G294100.1 | Wheat | plastid | 59.06 | 54.45 |
EES10882 | Sorghum | plastid | 58.35 | 53.68 |
TraesCS2A01G315100.2 | Wheat | plastid | 58.94 | 53.3 |
Zm00001d027893_P001 | Maize | plastid | 60.47 | 53.1 |
Zm00001d025524_P001 | Maize | plastid | 57.18 | 52.31 |
Zm00001d003533_P001 | Maize | plastid | 57.88 | 52.28 |
CDY70843 | Canola | cytosol | 6.82 | 46.03 |
CDY61034 | Canola | cytosol | 24.12 | 45.86 |
CDY07409 | Canola | cytosol | 20.47 | 44.96 |
CDY51606 | Canola | plastid | 48.12 | 44.8 |
CDY12655 | Canola | plastid | 47.88 | 44.58 |
CDY07417 | Canola | plastid | 47.53 | 44.01 |
CDY70916 | Canola | cytosol | 25.65 | 43.25 |
CDY61881 | Canola | cytosol | 17.53 | 41.97 |
CDY72550 | Canola | cytosol | 15.76 | 41.74 |
CDX91565 | Canola | plastid | 41.88 | 39.56 |
CDY04196 | Canola | plastid | 41.29 | 39.48 |
CDY61036 | Canola | plastid | 41.06 | 39.26 |
CDX67920 | Canola | plastid | 41.65 | 39.16 |
CDX79416 | Canola | plastid | 41.29 | 38.83 |
CDY16339 | Canola | plastid | 34.24 | 38.24 |
CDY46325 | Canola | cytosol | 39.06 | 37.64 |
CDY38326 | Canola | cytosol | 38.82 | 37.2 |
CDY61880 | Canola | plastid | 23.76 | 36.66 |
CDY64191 | Canola | cytosol | 39.06 | 36.6 |
CDY28879 | Canola | cytosol, endoplasmic reticulum, plastid | 47.41 | 35.98 |
CDY70245 | Canola | plastid | 18.0 | 33.41 |
CDY07408 | Canola | plastid | 17.76 | 32.97 |
CDY07407 | Canola | cytosol, plastid | 41.76 | 32.36 |
CDY70606 | Canola | plastid | 14.94 | 32.15 |
CDY61882 | Canola | plastid | 14.35 | 31.52 |
CDY43490 | Canola | cytosol, plasma membrane | 39.76 | 28.1 |
Protein Annotations
Gene3D:1.20.245.10 | Gene3D:2.60.60.20 | Gene3D:3.10.450.60 | Gene3D:4.10.372.10 | Gene3D:4.10.375.10 | MapMan:50.1.12 |
GO:A0A078CY99 | EnsemblPlants:CDX82146 | ProteinID:CDX82146 | ProteinID:CDX82146.1 | GO:GO:0003674 | GO:GO:0003824 |
GO:GO:0005488 | GO:GO:0005515 | GO:GO:0006629 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 |
GO:GO:0009987 | GO:GO:0016491 | GO:GO:0016702 | GO:GO:0031408 | GO:GO:0046872 | GO:GO:0055114 |
EnsemblPlantsGene:GSBRNA2T00137200001 | InterPro:IPR001024 | InterPro:IPR013819 | InterPro:IPR027433 | InterPro:LipOase | InterPro:LipOase_C |
InterPro:LipOase_CS | InterPro:LipOase_C_sf | InterPro:LipOase_Fe_BS | InterPro:LipOase_plant | InterPro:Lipoxygenase_dom_3 | PFAM:PF00305 |
PFAM:PF01477 | InterPro:PLAT/LH2_dom | InterPro:PLAT/LH2_dom_sf | PRINTS:PR00087 | PRINTS:PR00468 | ScanProsite:PS00081 |
ScanProsite:PS00711 | PFscan:PS50095 | PFscan:PS51393 | PANTHER:PTHR11771 | PANTHER:PTHR11771:SF67 | SMART:SM00308 |
SUPFAM:SSF48484 | SUPFAM:SSF49723 | UniPathway:UPA00382 | UniParc:UPI0004EEF9B0 | : | : |
Description
BnaC02g21440D
Coordinates
chrLK031827:-:1123604..1127252
Molecular Weight (calculated)
95952.5 Da
IEP (calculated)
7.858
GRAVY (calculated)
-0.418
Length
850 amino acids
Sequence
(BLAST)
(BLAST)
001: MALAKEIMGS RLIFERSSSL ASSPFQSRLS IKKKTQRTQL SINPFDLRPM KAAISGGVVA AISEDLVKTL RFNTLGRNQE NEEVEKAVQF KVRAVVTVRN
101: KNKEDFKETL VKHLDAFTDK IGRNVVLELI SIQVDPKTNE PKKSKPAILK DWSKKSNSKA EKVHYAAEFT VDSAFGLPGA ITVTNKHQKE FFLENITIEG
201: FACGPVHFPC NSWVQSQNDH PSKRIFFTNQ PYLPSETPSG LRTLREQELE NLRGNGKGER KLSDRIYDFD VYNDIGNPDI STELARPVFG GREFPYPRRC
301: RTGRRSSDTD LMSERRVEKP LPMYVPRDEQ FEESKKNTFA ACRLKAVLHN LVPSLKASIL AEDFANFGEI DSLYKEGLLL KLGIQDDMFK KFPLPKIVTT
401: LQKSSEGLLR YDTPKIVSKD KYAWLRDDEF ARQAIAGINP VNIERVTTYP PVSNLDREIY GSHLDSALTE DHIIGHLDGL SVQQALETNR LFMVDYHDTY
501: LPFLDRINAL DRRKAYATRT ILFLTRLGTL KPVAIELSLP KSKRVVTPPI DATSNWTWQL AKAHVGSNDA GVHQLVNHWL RTHACLEPFI LAAHRQLSAL
601: HPIYKLLDPH MRYTLEINAV ARQTLVSADG VIESCFTAGQ YGLEISAAAY KNQWRFDMEG LPADLIRRGM AVPDPTQPHG LKLLVEDYPY ANDVWLASAQ
701: HAALNFGQYP YGGYVPNRPP LMRQLIPDES EPEFASFVED PQKYFFSSLP SLLQTTKFMA VVDTLSTHSP DEEYIGERQQ PSIWTGDAEI VDAFYGFSAE
801: IGRIEQEIEK RNKDPSRRNR CGAGVLPYEL MAPSSEPGVT CRGVPNSVSI
101: KNKEDFKETL VKHLDAFTDK IGRNVVLELI SIQVDPKTNE PKKSKPAILK DWSKKSNSKA EKVHYAAEFT VDSAFGLPGA ITVTNKHQKE FFLENITIEG
201: FACGPVHFPC NSWVQSQNDH PSKRIFFTNQ PYLPSETPSG LRTLREQELE NLRGNGKGER KLSDRIYDFD VYNDIGNPDI STELARPVFG GREFPYPRRC
301: RTGRRSSDTD LMSERRVEKP LPMYVPRDEQ FEESKKNTFA ACRLKAVLHN LVPSLKASIL AEDFANFGEI DSLYKEGLLL KLGIQDDMFK KFPLPKIVTT
401: LQKSSEGLLR YDTPKIVSKD KYAWLRDDEF ARQAIAGINP VNIERVTTYP PVSNLDREIY GSHLDSALTE DHIIGHLDGL SVQQALETNR LFMVDYHDTY
501: LPFLDRINAL DRRKAYATRT ILFLTRLGTL KPVAIELSLP KSKRVVTPPI DATSNWTWQL AKAHVGSNDA GVHQLVNHWL RTHACLEPFI LAAHRQLSAL
601: HPIYKLLDPH MRYTLEINAV ARQTLVSADG VIESCFTAGQ YGLEISAAAY KNQWRFDMEG LPADLIRRGM AVPDPTQPHG LKLLVEDYPY ANDVWLASAQ
701: HAALNFGQYP YGGYVPNRPP LMRQLIPDES EPEFASFVED PQKYFFSSLP SLLQTTKFMA VVDTLSTHSP DEEYIGERQQ PSIWTGDAEI VDAFYGFSAE
801: IGRIEQEIEK RNKDPSRRNR CGAGVLPYEL MAPSSEPGVT CRGVPNSVSI
001: MALAKELMGY PLITERSSLV SSASHFKKRT QSTQFSINPF DRRPRKTKSG VVAAISEDLV KTLRFSTTTG DRKSEEEEKA AVKFKVRAVV TVRNKNKEDL
101: KETLVKHLDA FADKIGRNIV LELISTQLDP KTKLPKKSNA AVLKDWSKKS KTKAERVHYT AEFTVDAAFG SPGAITVMNK HQKEFFLESI TIEGFALGPV
201: HFPCNSWVQS QKDHPDKRIF FTNQPYLPNE TPSGLRVLRE KELKNLRGDG SGVRKLSDRI YDFDVYNDLG NPDKSSELSR PKLGGKEVPY PRRCRTGRQS
301: TVSDKDAESR VEKPLPMYVP RDEQFEESKQ DTFAAGRLKA VLHHLIPSLK ASIVAEDFAD FGEIDRLYKE GLLLKLGFQD DIFKKFPLPK VVVDTLQEST
401: KGLLKYDTPK ILSKDKNAWL RDDEFARQAI AGINPVNIER VKTFPPVSNL DPKIYGPQHS ALTDDHIIGH LDGFSVQQAL EENRLYMLDY HDIFLPFLDR
501: INALDGRKAY ATRTIFFLTR LGTLKPVAIE LSLPPHGPKH RSKRVLTPPV DATSNWMWQL AKAHVSSNDA GVHQLVNHWL RTHACLEPFI LAAHRQLSAM
601: HPIFKLLDPH MRYTLEINAL ARQSLISADG VIEGGFTAGA YGMEMSAAAY KSSWRFDMEG LPADLIRRGM AIPDATQPHG LKLLIEDYPY ANDGLLLWSA
701: IQTWVRTYVE RYYPNPNLIK TDSELQSWYS ESINVGHADL RDADWWPELS TVDDLVSILT TLIWLASAQH AALNFGQYPY GGYVPNRPPL MRRLIPDESD
801: PEYASFISHP EKYYFSSMPS LAQTSKFMAV VDTLSTHSPD EEYIGERQQP SIWTGDAEIV EAFYGFAAEI GRIEKEIEKR NADPDRRNRC GAGVLPYELL
901: VPSSEPGVTC RGVPNSVSI
101: KETLVKHLDA FADKIGRNIV LELISTQLDP KTKLPKKSNA AVLKDWSKKS KTKAERVHYT AEFTVDAAFG SPGAITVMNK HQKEFFLESI TIEGFALGPV
201: HFPCNSWVQS QKDHPDKRIF FTNQPYLPNE TPSGLRVLRE KELKNLRGDG SGVRKLSDRI YDFDVYNDLG NPDKSSELSR PKLGGKEVPY PRRCRTGRQS
301: TVSDKDAESR VEKPLPMYVP RDEQFEESKQ DTFAAGRLKA VLHHLIPSLK ASIVAEDFAD FGEIDRLYKE GLLLKLGFQD DIFKKFPLPK VVVDTLQEST
401: KGLLKYDTPK ILSKDKNAWL RDDEFARQAI AGINPVNIER VKTFPPVSNL DPKIYGPQHS ALTDDHIIGH LDGFSVQQAL EENRLYMLDY HDIFLPFLDR
501: INALDGRKAY ATRTIFFLTR LGTLKPVAIE LSLPPHGPKH RSKRVLTPPV DATSNWMWQL AKAHVSSNDA GVHQLVNHWL RTHACLEPFI LAAHRQLSAM
601: HPIFKLLDPH MRYTLEINAL ARQSLISADG VIEGGFTAGA YGMEMSAAAY KSSWRFDMEG LPADLIRRGM AIPDATQPHG LKLLIEDYPY ANDGLLLWSA
701: IQTWVRTYVE RYYPNPNLIK TDSELQSWYS ESINVGHADL RDADWWPELS TVDDLVSILT TLIWLASAQH AALNFGQYPY GGYVPNRPPL MRRLIPDESD
801: PEYASFISHP EKYYFSSMPS LAQTSKFMAV VDTLSTHSPD EEYIGERQQP SIWTGDAEIV EAFYGFAAEI GRIEKEIEKR NADPDRRNRC GAGVLPYELL
901: VPSSEPGVTC RGVPNSVSI
Arabidopsis Description
LOX3Lipoxygenase 3, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9LNR3]
SUBAcon: [plastid,cytosol]
SUBAcon: [plastid,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.