Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 2
- mitochondrion 1
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KXG24148 | Sorghum | cytosol | 88.24 | 87.51 |
| KXG23911 | Sorghum | cytosol, plastid | 52.12 | 81.28 |
| Os05t0304600-01 | Rice | plastid | 77.76 | 78.04 |
| HORVU1Hr1G054390.4 | Barley | cytosol | 76.82 | 77.37 |
| TraesCS1B01G226400.1 | Wheat | cytosol | 76.82 | 77.37 |
| TraesCS1D01G215800.2 | Wheat | cytosol | 76.82 | 77.19 |
| TraesCS1A01G212900.1 | Wheat | cytosol | 76.35 | 76.9 |
| GSMUA_Achr2P05850_001 | Banana | cytosol | 60.0 | 61.97 |
| PGSC0003DMT400074322 | Potato | cytosol | 28.47 | 54.75 |
| Solyc09g055900.2.1 | Tomato | cytosol | 28.94 | 53.25 |
| VIT_07s0141g00340.t01 | Wine grape | cytosol, plastid | 38.12 | 50.78 |
| VIT_07s0289g00010.t01 | Wine grape | cytosol | 26.82 | 47.8 |
| KRH66214 | Soybean | cytosol | 48.12 | 47.23 |
| KRH07345 | Soybean | cytosol, plastid | 47.41 | 46.81 |
| Zm00001d033623_P003 | Maize | cytosol | 46.94 | 46.02 |
| Zm00001d042541_P002 | Maize | cytosol | 45.76 | 44.0 |
| Zm00001d033624_P001 | Maize | cytosol | 45.76 | 43.86 |
| Zm00001d013493_P001 | Maize | cytosol, extracellular, mitochondrion | 45.65 | 43.74 |
| Zm00001d042540_P008 | Maize | cytosol | 44.47 | 42.38 |
| Zm00001d053675_P001 | Maize | plastid | 40.35 | 37.9 |
| Zm00001d025524_P001 | Maize | plastid | 41.18 | 37.67 |
| Zm00001d015852_P004 | Maize | plastid | 39.88 | 37.21 |
| Solyc09g055890.2.1 | Tomato | cytosol | 16.12 | 36.93 |
| Zm00001d003533_P001 | Maize | plastid | 40.71 | 36.77 |
| PGSC0003DMT400074324 | Potato | cytosol | 14.94 | 36.71 |
| Zm00001d031449_P001 | Maize | mitochondrion | 41.18 | 36.61 |
| Zm00001d002000_P003 | Maize | cytosol, mitochondrion, plastid | 38.71 | 36.39 |
| Zm00001d027893_P001 | Maize | plastid | 40.94 | 35.95 |
Protein Annotations
| Gene3D:1.20.245.10 | EntrezGene:100037829 | Gene3D:2.60.60.20 | Gene3D:3.10.450.60 | Gene3D:4.10.372.10 | Gene3D:4.10.375.10 |
| MapMan:50.1.12 | UniProt:A1XCI7 | ncoils:Coil | EMBL:DQ335770 | GO:GO:0003674 | GO:GO:0003824 |
| GO:GO:0005488 | GO:GO:0005515 | GO:GO:0006629 | GO:GO:0006633 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0009058 | GO:GO:0009987 | GO:GO:0016491 | GO:GO:0016702 | GO:GO:0031408 | GO:GO:0046872 |
| GO:GO:0051213 | GO:GO:0055114 | InterPro:IPR001024 | InterPro:IPR013819 | InterPro:IPR027433 | InterPro:LipOase |
| InterPro:LipOase_C | InterPro:LipOase_CS | InterPro:LipOase_C_sf | InterPro:LipOase_plant | InterPro:Lipoxygenase_dom_3 | ProteinID:ONM32677.1 |
| PFAM:PF00305 | PFAM:PF01477 | InterPro:PLAT/LH2_dom | InterPro:PLAT/LH2_dom_sf | PRINTS:PR00087 | PRINTS:PR00468 |
| ScanProsite:PS00081 | PFscan:PS50095 | PFscan:PS51393 | PANTHER:PTHR11771 | PANTHER:PTHR11771:SF59 | SMART:SM00308 |
| SUPFAM:SSF48484 | SUPFAM:SSF49723 | UniParc:UPI0000ED5CA3 | EnsemblPlantsGene:Zm00001d041204 | EnsemblPlants:Zm00001d041204_P001 | EnsemblPlants:Zm00001d041204_T001 |
| SEG:seg | : | : | : | : | : |
Description
lipoxygenase12 lipoxygenase12
Coordinates
chr3:-:105356377..105359732
Molecular Weight (calculated)
95997.5 Da
IEP (calculated)
8.221
GRAVY (calculated)
-0.440
Length
850 amino acids
Sequence
(BLAST)
(BLAST)
001: MQMPFCPSLN LWDRSPAHAP ENHIAIDGTV VVSCHFGLSL PGKTTTLRLF SSTQMDPNTG KGKLSAEAPL RGGKKTKQQG RKTSTMAYQV TFFVDAEFGT
101: PGAVVVKNGL RNDQFFLRHV QLNLPEDGRS VHFECNSWVY PYKKTNADRV FFINTSYLPD RTPQALRLLR DEELRSLRGN GRGERKDWER VYDYDLYNDL
201: GDPDKEDRAR PALGGTATHP YPRRCRTGRP LFKTDGVTET RKHLINLDFY IPPDERFSPT KLAEVLALAV QAVTHFVVPE SNALFHGNVN SFRSFDQLKD
301: DLYGRRPPVA VDGQVMDKLK TSVPSHKTYK QVSKMVKETP VKFPIPQVIE HDQEAWRSDE EFAREMLAGL NPVVISRLEV FPPVSRGGKK SSITEAHIES
401: QLQGRTVQKA LDDKRLYLLD HHDYLMPYLR RINTQQGVCV YASRTLLFLR DDGALKPLAI ELSLPGDGAE VSSRVILPAT PGTTDGHLWW LAKAHVSVND
501: SGYHQLISHW LFTHATVEPF IIATKRQMSA MHPIHKLLEP HFKDNMQINT LARSILLSAG GILERTMYPG KYAMEMSSAI YSEWRFTEQS LPNELVKRGM
601: ASKMGGGAIA LHVEDYPYAV DGMDVWRAIE GWVRTYCAHF YHSDAAVAAD AELQAWWDDV RRVGHGDRQR DPACWLDLDS VANLAESLST LIWIASALHA
701: AVNFGQYGYA GYMPNRPTRC RRFVPLPDSP EMAQLEADPD RFFLDTVPDR FTATLGLTLI EVLSNHTSDE LYLGQRATAA WTDDGEVLQL LDRFREELRR
801: VEKRITERNR DPRLKNRKGP AKVPYTLLFP DVGGKEKGIT GKGIPNSVSI
101: PGAVVVKNGL RNDQFFLRHV QLNLPEDGRS VHFECNSWVY PYKKTNADRV FFINTSYLPD RTPQALRLLR DEELRSLRGN GRGERKDWER VYDYDLYNDL
201: GDPDKEDRAR PALGGTATHP YPRRCRTGRP LFKTDGVTET RKHLINLDFY IPPDERFSPT KLAEVLALAV QAVTHFVVPE SNALFHGNVN SFRSFDQLKD
301: DLYGRRPPVA VDGQVMDKLK TSVPSHKTYK QVSKMVKETP VKFPIPQVIE HDQEAWRSDE EFAREMLAGL NPVVISRLEV FPPVSRGGKK SSITEAHIES
401: QLQGRTVQKA LDDKRLYLLD HHDYLMPYLR RINTQQGVCV YASRTLLFLR DDGALKPLAI ELSLPGDGAE VSSRVILPAT PGTTDGHLWW LAKAHVSVND
501: SGYHQLISHW LFTHATVEPF IIATKRQMSA MHPIHKLLEP HFKDNMQINT LARSILLSAG GILERTMYPG KYAMEMSSAI YSEWRFTEQS LPNELVKRGM
601: ASKMGGGAIA LHVEDYPYAV DGMDVWRAIE GWVRTYCAHF YHSDAAVAAD AELQAWWDDV RRVGHGDRQR DPACWLDLDS VANLAESLST LIWIASALHA
701: AVNFGQYGYA GYMPNRPTRC RRFVPLPDSP EMAQLEADPD RFFLDTVPDR FTATLGLTLI EVLSNHTSDE LYLGQRATAA WTDDGEVLQL LDRFREELRR
801: VEKRITERNR DPRLKNRKGP AKVPYTLLFP DVGGKEKGIT GKGIPNSVSI
001: MALAKELMGY PLITERSSLV SSASHFKKRT QSTQFSINPF DRRPRKTKSG VVAAISEDLV KTLRFSTTTG DRKSEEEEKA AVKFKVRAVV TVRNKNKEDL
101: KETLVKHLDA FADKIGRNIV LELISTQLDP KTKLPKKSNA AVLKDWSKKS KTKAERVHYT AEFTVDAAFG SPGAITVMNK HQKEFFLESI TIEGFALGPV
201: HFPCNSWVQS QKDHPDKRIF FTNQPYLPNE TPSGLRVLRE KELKNLRGDG SGVRKLSDRI YDFDVYNDLG NPDKSSELSR PKLGGKEVPY PRRCRTGRQS
301: TVSDKDAESR VEKPLPMYVP RDEQFEESKQ DTFAAGRLKA VLHHLIPSLK ASIVAEDFAD FGEIDRLYKE GLLLKLGFQD DIFKKFPLPK VVVDTLQEST
401: KGLLKYDTPK ILSKDKNAWL RDDEFARQAI AGINPVNIER VKTFPPVSNL DPKIYGPQHS ALTDDHIIGH LDGFSVQQAL EENRLYMLDY HDIFLPFLDR
501: INALDGRKAY ATRTIFFLTR LGTLKPVAIE LSLPPHGPKH RSKRVLTPPV DATSNWMWQL AKAHVSSNDA GVHQLVNHWL RTHACLEPFI LAAHRQLSAM
601: HPIFKLLDPH MRYTLEINAL ARQSLISADG VIEGGFTAGA YGMEMSAAAY KSSWRFDMEG LPADLIRRGM AIPDATQPHG LKLLIEDYPY ANDGLLLWSA
701: IQTWVRTYVE RYYPNPNLIK TDSELQSWYS ESINVGHADL RDADWWPELS TVDDLVSILT TLIWLASAQH AALNFGQYPY GGYVPNRPPL MRRLIPDESD
801: PEYASFISHP EKYYFSSMPS LAQTSKFMAV VDTLSTHSPD EEYIGERQQP SIWTGDAEIV EAFYGFAAEI GRIEKEIEKR NADPDRRNRC GAGVLPYELL
901: VPSSEPGVTC RGVPNSVSI
101: KETLVKHLDA FADKIGRNIV LELISTQLDP KTKLPKKSNA AVLKDWSKKS KTKAERVHYT AEFTVDAAFG SPGAITVMNK HQKEFFLESI TIEGFALGPV
201: HFPCNSWVQS QKDHPDKRIF FTNQPYLPNE TPSGLRVLRE KELKNLRGDG SGVRKLSDRI YDFDVYNDLG NPDKSSELSR PKLGGKEVPY PRRCRTGRQS
301: TVSDKDAESR VEKPLPMYVP RDEQFEESKQ DTFAAGRLKA VLHHLIPSLK ASIVAEDFAD FGEIDRLYKE GLLLKLGFQD DIFKKFPLPK VVVDTLQEST
401: KGLLKYDTPK ILSKDKNAWL RDDEFARQAI AGINPVNIER VKTFPPVSNL DPKIYGPQHS ALTDDHIIGH LDGFSVQQAL EENRLYMLDY HDIFLPFLDR
501: INALDGRKAY ATRTIFFLTR LGTLKPVAIE LSLPPHGPKH RSKRVLTPPV DATSNWMWQL AKAHVSSNDA GVHQLVNHWL RTHACLEPFI LAAHRQLSAM
601: HPIFKLLDPH MRYTLEINAL ARQSLISADG VIEGGFTAGA YGMEMSAAAY KSSWRFDMEG LPADLIRRGM AIPDATQPHG LKLLIEDYPY ANDGLLLWSA
701: IQTWVRTYVE RYYPNPNLIK TDSELQSWYS ESINVGHADL RDADWWPELS TVDDLVSILT TLIWLASAQH AALNFGQYPY GGYVPNRPPL MRRLIPDESD
801: PEYASFISHP EKYYFSSMPS LAQTSKFMAV VDTLSTHSPD EEYIGERQQP SIWTGDAEIV EAFYGFAAEI GRIEKEIEKR NADPDRRNRC GAGVLPYELL
901: VPSSEPGVTC RGVPNSVSI
Arabidopsis Description
LOX3Lipoxygenase 3, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9LNR3]
SUBAcon: [plastid,cytosol]
SUBAcon: [plastid,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.