CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid, cytosol

Predictor Summary:

nucleus 2
plastid 3
mitochondrion 2
cytosol 3

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH66214	Soybean	cytosol	94.54	94.0
PGSC0003DMT400074322	Potato	cytosol	32.87	64.03
Solyc09g055900.2.1	Tomato	cytosol	33.33	62.12
VIT_07s0141g00340.t01	Wine grape	cytosol, plastid	42.39	57.21
VIT_07s0289g00010.t01	Wine grape	cytosol	29.73	53.67
GSMUA_Achr2P05850_001	Banana	cytosol	50.75	53.1
KRH35534	Soybean	cytosol	27.29	52.46
TraesCS1B01G226400.1	Wheat	cytosol	49.01	50.0
TraesCS1D01G215800.2	Wheat	cytosol	49.01	49.88
TraesCS1A01G212900.1	Wheat	cytosol	48.78	49.76
HORVU1Hr1G054390.4	Barley	cytosol	48.32	49.29
Os05t0304600-01	Rice	plastid	47.62	48.41
KXG24148	Sorghum	cytosol	47.74	47.96
Zm00001d041204_P001	Maize	cytosol	46.81	47.41
KRH16725	Soybean	cytosol	12.54	46.75
KRH62399	Soybean	cytosol, endoplasmic reticulum	12.66	46.19
KRH68548	Soybean	cytosol	45.64	45.8
KXG23911	Sorghum	cytosol, plastid	28.92	45.69
KRH33939	Soybean	cytosol, endoplasmic reticulum	45.18	44.97
KRH10050	Soybean	endoplasmic reticulum	43.55	43.76
KRG91271	Soybean	cytosol	42.86	43.01
KRH44095	Soybean	endoplasmic reticulum	43.09	42.84
KRH10051	Soybean	endoplasmic reticulum, nucleus	42.51	42.76
KRH44093	Soybean	endoplasmic reticulum	41.93	42.67
KRH57987	Soybean	cytosol	12.78	42.64
KRH44097	Soybean	cytosol, endoplasmic reticulum	42.86	42.51
KRH44090	Soybean	endoplasmic reticulum	42.28	42.33
KRH47522	Soybean	endoplasmic reticulum, nucleus	42.51	42.31
KRH47066	Soybean	endoplasmic reticulum, nucleus	42.16	42.26
KRH10053	Soybean	endoplasmic reticulum	41.7	42.09
KRH23268	Soybean	endoplasmic reticulum	41.46	41.85
KRH23266	Soybean	cytosol	39.84	41.53
Solyc09g055890.2.1	Tomato	cytosol	17.89	41.51
KRH47525	Soybean	endoplasmic reticulum	41.7	41.36
KRH44094	Soybean	endoplasmic reticulum	41.58	41.29
KRH62403	Soybean	cytosol, endoplasmic reticulum	10.8	40.97
KRH23269	Soybean	endoplasmic reticulum	39.02	40.88
KRH47069	Soybean	endoplasmic reticulum	21.49	40.66
KRH13357	Soybean	endoplasmic reticulum	11.38	40.5
PGSC0003DMT400074324	Potato	cytosol	16.26	40.46
KRH47067	Soybean	endoplasmic reticulum	40.42	40.28
KRH47064	Soybean	endoplasmic reticulum	26.48	40.0
KRH23265	Soybean	endoplasmic reticulum, nucleus	40.19	39.95
KRH10882	Soybean	cytosol	19.86	39.4
KRH44092	Soybean	nucleus	38.79	38.97
KRH69027	Soybean	plastid	40.19	38.4
KRG97300	Soybean	plastid	39.72	38.04
KRG89883	Soybean	cytosol, plastid	37.63	37.72
KRH47615	Soybean	nucleus	39.49	36.68
KRH06197	Soybean	nucleus	39.02	36.44
KRG89889	Soybean	cytosol, plastid	36.24	36.28
KRH29668	Soybean	nucleus	38.1	36.2
KRH42646	Soybean	plastid	38.68	36.16
KRH24671	Soybean	cytosol, plastid	38.33	36.1
KRH21441	Soybean	cytosol	38.1	36.04
KRH17965	Soybean	plastid	37.86	35.51
KRG89888	Soybean	nucleus	36.59	34.88
KRH50048	Soybean	cytosol	36.7	34.73
KRG88464	Soybean	cytosol	18.23	34.43
KRH18682	Soybean	cytosol, mitochondrion	36.35	34.36
KRH29669	Soybean	plastid	35.77	34.18
KRH30640	Soybean	cytosol	6.27	28.88

Protein Annotations

Gene3D:1.20.245.10	Gene3D:2.60.60.20	Gene3D:3.10.450.60	Gene3D:4.10.372.10	Gene3D:4.10.375.10	MapMan:50.1.12
EMBL:ACUP02009971	ncoils:Coil	EnsemblPlantsGene:GLYMA_16G082600	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488
GO:GO:0005515	GO:GO:0006629	GO:GO:0006633	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058
GO:GO:0009987	GO:GO:0016491	GO:GO:0016702	GO:GO:0031408	GO:GO:0046872	GO:GO:0051213
GO:GO:0055114	InterPro:IPR001024	InterPro:IPR013819	InterPro:IPR027433	UniProt:K7MFX1	EnsemblPlants:KRH07345
ProteinID:KRH07345	ProteinID:KRH07345.1	InterPro:LipOase	InterPro:LipOase_C	InterPro:LipOase_CS	InterPro:LipOase_C_sf
InterPro:LipOase_plant	InterPro:Lipoxygenase_dom_3	PFAM:PF00305	PFAM:PF01477	InterPro:PLAT/LH2_dom	InterPro:PLAT/LH2_dom_sf
PRINTS:PR00087	PRINTS:PR00468	ScanProsite:PS00081	PFscan:PS50095	PFscan:PS51393	PANTHER:PTHR11771
PANTHER:PTHR11771:SF59	SMART:SM00308	SUPFAM:SSF48484	SUPFAM:SSF49723	UniParc:UPI000294AB7C	SEG:seg

Description

hypothetical protein

Coordinates

chr16:-:9227831..9237983

Molecular Weight (calculated)

99167.3 Da

IEP (calculated)

8.807

GRAVY (calculated)

-0.452

Length

861 amino acids

Sequence
(BLAST)

001: MPKKASSSVP KWQYSSSVTT KMLNNLNPIC QATQQLTLKG KFVITHNHSK SIPGKLISVQ IYSGTEVDPE TGKGKLSEKA CFKQCESMKH SHDAQTMIYK
101: IKIHIDSHFG TPRAFLIQNK HKKKFFLQSA SIETNDHIIH FDCNSWIYPI KKTKSDRLFF SNRCCLPSHT PRALVELRKE ELDRLRGNGM GERKEWDRIY
201: DYDCYNDLGD PDKGPEHLRP VLGGSRLFPY PRRGRTGRKH STAGPSCESR PQPMNFDIYV PSDERFGPNK LKELKSNCVH AMVHFLSPKA EFLPRRISAD
301: FHSFEELLDM FSSNRNQTIE GWMRDNLKKL IPVEHLKEIN HAMKENHGQL PIPQIISENE WAWKDDMEFG RQMIAGTHPT RIQCLTTFPP QNKFGIQSSI
401: KQSIIEQRLE GWTLSQAMEH GRIFMLDHHD YLIPYLNRIN ANGVCAYASR TLLFLRSDGM LKPLTIELSL PGQYPHLEIH RVFLPAKQGT QAALWQLAKA
501: HVLANDVVYH QLISHWLYTH AVIEPFIIAT KRRLSVMHPI HRLLNPHFKD TMHINALARL ILINSGGIFE RILFPGEICM QISCDLYKEW RFKEQGLPAD
601: LLKRSMAVKD SDINNPTGIQ LLLLDYPYAT DGLEIWVVIK EWVKDFCSFF YKDNEAIEGD VELQAWWSEI RTNGHGDKHN DTWWYQLTTL SNLVEALTTL
701: IWIASAKHAS LNYGQHAYNG YPPNRPTLCR KFVPLEGRVE FGEFLKDPDK FFLGMLPNRF EMSLAVALVD VLSRHTSDEV YLGCQQSPGW IDNEVIQNRF
801: AEFKQEIKEI QSRIMQRNRD LKLKNRRGPA NIEYTLLYPD TSSSASTSGI TGRGIPNSIS I

Best Arabidopsis Sequence Match ( AT1G17420.1 )
(BLAST)

001: MALAKELMGY PLITERSSLV SSASHFKKRT QSTQFSINPF DRRPRKTKSG VVAAISEDLV KTLRFSTTTG DRKSEEEEKA AVKFKVRAVV TVRNKNKEDL
101: KETLVKHLDA FADKIGRNIV LELISTQLDP KTKLPKKSNA AVLKDWSKKS KTKAERVHYT AEFTVDAAFG SPGAITVMNK HQKEFFLESI TIEGFALGPV
201: HFPCNSWVQS QKDHPDKRIF FTNQPYLPNE TPSGLRVLRE KELKNLRGDG SGVRKLSDRI YDFDVYNDLG NPDKSSELSR PKLGGKEVPY PRRCRTGRQS
301: TVSDKDAESR VEKPLPMYVP RDEQFEESKQ DTFAAGRLKA VLHHLIPSLK ASIVAEDFAD FGEIDRLYKE GLLLKLGFQD DIFKKFPLPK VVVDTLQEST
401: KGLLKYDTPK ILSKDKNAWL RDDEFARQAI AGINPVNIER VKTFPPVSNL DPKIYGPQHS ALTDDHIIGH LDGFSVQQAL EENRLYMLDY HDIFLPFLDR
501: INALDGRKAY ATRTIFFLTR LGTLKPVAIE LSLPPHGPKH RSKRVLTPPV DATSNWMWQL AKAHVSSNDA GVHQLVNHWL RTHACLEPFI LAAHRQLSAM
601: HPIFKLLDPH MRYTLEINAL ARQSLISADG VIEGGFTAGA YGMEMSAAAY KSSWRFDMEG LPADLIRRGM AIPDATQPHG LKLLIEDYPY ANDGLLLWSA
701: IQTWVRTYVE RYYPNPNLIK TDSELQSWYS ESINVGHADL RDADWWPELS TVDDLVSILT TLIWLASAQH AALNFGQYPY GGYVPNRPPL MRRLIPDESD
801: PEYASFISHP EKYYFSSMPS LAQTSKFMAV VDTLSTHSPD EEYIGERQQP SIWTGDAEIV EAFYGFAAEI GRIEKEIEKR NADPDRRNRC GAGVLPYELL
901: VPSSEPGVTC RGVPNSVSI

Arabidopsis Description

LOX3Lipoxygenase 3, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9LNR3]
SUBAcon: [plastid,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.