Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 2
- mitochondrion 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY38545 | Canola | cytosol | 84.02 | 82.32 |
| CDY33686 | Canola | cytosol | 82.47 | 80.4 |
| AT5G35620.1 | Thale cress | cytosol | 79.9 | 78.28 |
| CDY49364 | Canola | cytosol | 79.38 | 77.0 |
| CDX84118 | Canola | cytosol | 78.87 | 76.5 |
| CDX74645 | Canola | cytosol | 81.44 | 69.3 |
| VIT_05s0049g01770.t01 | Wine grape | cytosol | 67.53 | 64.22 |
| Solyc09g090580.2.1 | Tomato | nucleus | 63.4 | 61.5 |
| PGSC0003DMT400044186 | Potato | cytosol | 63.4 | 61.5 |
| GSMUA_Achr4P25000_001 | Banana | cytosol | 60.82 | 61.46 |
| Os10t0467600-01 | Rice | cytosol, plastid | 63.4 | 59.71 |
| KRG90357 | Soybean | endoplasmic reticulum | 59.79 | 58.0 |
| KRH33614 | Soybean | cytosol | 60.31 | 57.07 |
| EER94108 | Sorghum | cytosol | 61.34 | 56.67 |
| Zm00001d032775_P002 | Maize | cytosol, extracellular | 61.34 | 56.67 |
| TraesCS1B01G167100.1 | Wheat | cytosol | 60.31 | 55.98 |
| GSMUA_Achr5P12940_001 | Banana | cytosol | 59.79 | 55.5 |
| Zm00001d014065_P001 | Maize | cytosol, extracellular | 60.82 | 54.63 |
| TraesCS1D01G146500.1 | Wheat | golgi | 58.76 | 54.55 |
| HORVU1Hr1G039260.2 | Barley | cytosol | 58.76 | 54.29 |
| TraesCS1A01G149200.1 | Wheat | cytosol | 58.76 | 53.52 |
| CDX90426 | Canola | cytosol | 22.68 | 47.83 |
| CDY01513 | Canola | extracellular | 22.68 | 46.32 |
| CDX78824 | Canola | cytosol | 46.39 | 39.47 |
| CDY61674 | Canola | cytosol | 45.88 | 39.04 |
| CDX76547 | Canola | cytosol | 46.39 | 38.46 |
| CDY08883 | Canola | cytosol | 45.88 | 38.03 |
| CDY44305 | Canola | cytosol | 40.21 | 31.97 |
| CDX99836 | Canola | cytosol | 40.72 | 31.85 |
| CDX94676 | Canola | cytosol | 39.18 | 30.89 |
| CDY48345 | Canola | cytosol | 38.66 | 30.24 |
| CDY38487 | Canola | cytosol | 28.35 | 25.7 |
| CDX78777 | Canola | cytosol | 28.87 | 25.69 |
| CDX70795 | Canola | cytosol | 28.35 | 25.23 |
| CDY53257 | Canola | cytosol | 28.35 | 24.55 |
| CDY49143 | Canola | cytosol | 28.35 | 24.55 |
| CDY45630 | Canola | cytosol | 28.35 | 24.55 |
| CDY02645 | Canola | cytosol | 28.35 | 24.55 |
Protein Annotations
| MapMan:17.4.2.4.1 | Gene3D:3.30.760.10 | GO:A0A078EZA1 | EnsemblPlants:CDY06456 | ProteinID:CDY06456 | ProteinID:CDY06456.1 |
| GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003723 | GO:GO:0003743 | GO:GO:0005488 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0006412 | GO:GO:0006413 | GO:GO:0008135 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0019538 | EnsemblPlantsGene:GSBRNA2T00122507001 |
| InterPro:IPR023398 | PFAM:PF01652 | ScanProsite:PS00813 | PANTHER:PTHR11960 | PANTHER:PTHR11960:SF12 | SUPFAM:SSF55418 |
| InterPro:TIF_eIF4e-like | InterPro:TIF_eIF_4E | InterPro:TIF_eIF_4E_CS | UniParc:UPI0004EE52C0 | : | : |
Description
BnaC06g11880D
Coordinates
chrLK031970:+:211612..229243
Molecular Weight (calculated)
22156.1 Da
IEP (calculated)
5.393
GRAVY (calculated)
-0.543
Length
194 amino acids
Sequence
(BLAST)
(BLAST)
001: MATEDVNEEA LAAAEVTEKQ PHKLERKWCF WFDNQSKQEQ GAAWGASLRK ACTFDTVEDF WGLHETIFIP SKLTPNAEIH MFKAGVEPKW EDPECANGGK
101: WTYVVANSRK QALDKAWLET LMALIGEQFD EADEICGLVA SVRQKQDKLS LWTRTKSNEA VLMSIGKKWK ALLDVTDKIT FTNHDDSRRS RFTV
101: WTYVVANSRK QALDKAWLET LMALIGEQFD EADEICGLVA SVRQKQDKLS LWTRTKSNEA VLMSIGKKWK ALLDVTDKIT FTNHDDSRRS RFTV
001: MATDDVNEPL PAAAELPATE AEKQPHKLER KWSFWFDNQS KKGAAWGASL RKAYTFDTVE DFWGLHETIF QTSKLTANAE IHLFKAGVEP KWEDPECANG
101: GKWTWVVTAN RKEALDKGWL ETLMALIGEQ FDEADEICGV VASVRPQSKQ DKLSLWTRTK SNEAVLMGIG KKWKEILDVT DKITFNNHDD SRRSRFTV
101: GKWTWVVTAN RKEALDKGWL ETLMALIGEQ FDEADEICGV VASVRPQSKQ DKLSLWTRTK SNEAVLMGIG KKWKEILDVT DKITFNNHDD SRRSRFTV
Arabidopsis Description
EIF(ISO)4ELSP1 [Source:UniProtKB/TrEMBL;Acc:A0A178UEE3]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.