Subcellular Localization
min:
: max
Winner_takes_all: golgi
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 2
- mitochondrion 1
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
golgi:
25769308
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS1A01G149200.1 | Wheat | cytosol | 99.04 | 97.18 |
| TraesCS1B01G167100.1 | Wheat | cytosol | 95.22 | 95.22 |
| HORVU1Hr1G039260.2 | Barley | cytosol | 91.87 | 91.43 |
| EER94108 | Sorghum | cytosol | 74.64 | 74.29 |
| Zm00001d014065_P001 | Maize | cytosol, extracellular | 76.08 | 73.61 |
| Os10t0467600-01 | Rice | cytosol, plastid | 72.25 | 73.3 |
| Zm00001d032775_P002 | Maize | cytosol, extracellular | 72.73 | 72.38 |
| GSMUA_Achr4P25000_001 | Banana | cytosol | 64.59 | 70.31 |
| VIT_05s0049g01770.t01 | Wine grape | cytosol | 67.94 | 69.61 |
| KRG90357 | Soybean | endoplasmic reticulum | 66.03 | 69.0 |
| PGSC0003DMT400044186 | Potato | cytosol | 63.64 | 66.5 |
| KRH33614 | Soybean | cytosol | 64.59 | 65.85 |
| Solyc09g090580.2.1 | Tomato | nucleus | 62.68 | 65.5 |
| GSMUA_Achr5P12940_001 | Banana | cytosol | 65.07 | 65.07 |
| CDY38545 | Canola | cytosol | 58.37 | 61.62 |
| Bra039484.1-P | Field mustard | cytosol | 58.37 | 61.62 |
| Bra035393.1-P | Field mustard | cytosol | 58.37 | 61.31 |
| AT5G35620.1 | Thale cress | cytosol | 57.89 | 61.11 |
| CDY33686 | Canola | cytosol | 57.42 | 60.3 |
| CDY06456 | Canola | cytosol | 54.55 | 58.76 |
| CDX84118 | Canola | cytosol | 55.5 | 58.0 |
| Bra035531.1-P | Field mustard | cytosol | 55.5 | 58.0 |
| CDY49364 | Canola | cytosol | 55.5 | 58.0 |
| CDX74645 | Canola | cytosol | 57.89 | 53.07 |
| TraesCS3D01G527800.1 | Wheat | cytosol, golgi | 44.98 | 43.72 |
| TraesCS4D01G216800.1 | Wheat | cytosol | 30.62 | 27.59 |
Protein Annotations
| MapMan:17.4.2.4.1 | Gene3D:3.30.760.10 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003723 | GO:GO:0003743 |
| GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0005737 |
| GO:GO:0005829 | GO:GO:0006412 | GO:GO:0006413 | GO:GO:0006950 | GO:GO:0008135 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009605 | GO:GO:0009607 | GO:GO:0009615 | GO:GO:0009987 |
| GO:GO:0019538 | GO:GO:0050687 | InterPro:IPR023398 | PFAM:PF01652 | ScanProsite:PS00813 | PANTHER:PTHR11960 |
| PANTHER:PTHR11960:SF12 | SUPFAM:SSF55418 | InterPro:TIF_eIF4e-like | InterPro:TIF_eIF_4E | InterPro:TIF_eIF_4E_CS | EnsemblPlantsGene:TraesCS1D01G146500 |
| EnsemblPlants:TraesCS1D01G146500.1 | SEG:seg | : | : | : | : |
Description
No Description!
Coordinates
chr1D:+:202561741..202564850
Molecular Weight (calculated)
23523.6 Da
IEP (calculated)
5.157
GRAVY (calculated)
-0.562
Length
209 amino acids
Sequence
(BLAST)
(BLAST)
001: MAEVEAALPV AATETPEVAA EGDAGAAEAK GPHKLQRQWT FWYDIQTKPK PGAAWGTSLK KGYTFDTVEE FWCLYDQIFR PSKLVGSADF HLFKAGVEPK
101: WEDPECANGG KWTVISSRKT NLDTMWLETC MALIGEQFDE SQEICGVVAS VRQRQDKLSL WTKTASNEAV QVDIGKKWKE VIDYNDKMVY SFHDDSRSQK
201: PSRGGRYTV
101: WEDPECANGG KWTVISSRKT NLDTMWLETC MALIGEQFDE SQEICGVVAS VRQRQDKLSL WTKTASNEAV QVDIGKKWKE VIDYNDKMVY SFHDDSRSQK
201: PSRGGRYTV
001: MATDDVNEPL PAAAELPATE AEKQPHKLER KWSFWFDNQS KKGAAWGASL RKAYTFDTVE DFWGLHETIF QTSKLTANAE IHLFKAGVEP KWEDPECANG
101: GKWTWVVTAN RKEALDKGWL ETLMALIGEQ FDEADEICGV VASVRPQSKQ DKLSLWTRTK SNEAVLMGIG KKWKEILDVT DKITFNNHDD SRRSRFTV
101: GKWTWVVTAN RKEALDKGWL ETLMALIGEQ FDEADEICGV VASVRPQSKQ DKLSLWTRTK SNEAVLMGIG KKWKEILDVT DKITFNNHDD SRRSRFTV
Arabidopsis Description
EIF(ISO)4ELSP1 [Source:UniProtKB/TrEMBL;Acc:A0A178UEE3]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.