Factsheet for Zm00001d014065_P001

Subcellular Localization

min:

: max

Winner_takes_all: extracellular, cytosol

Predictor Summary:

cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, extracellular
Any Predictor:	cytosol, mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

extracellular: 20408568

msms PMID: 20408568 doi

W Ma, N Muthreich, C Liao, M Franz-Wachtel, W Schütz, F Zhang, F Hochholdinger, C Li

Department of Plant Nutrition, China Agricultural University, Beijing, PR China.

PPI

Inferred distinct locusB in Crop

locusB	locations
Zm00001d003147_P001
Zm00001d013999_P001
Zm00001d015852_P004
Zm00001d025777_P007
Zm00001d027318_P001
Zm00001d031449_P001
Zm00001d032668_P001
Zm00001d048526_P001
Zm00001d053675_P001

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G35620.1	Zm00001d013999_P001	AT1G17880.1	15716105
AT5G35620.1	Zm00001d027318_P001	AT1G17880.1	15716105
AT5G35620.1	Zm00001d032668_P001	AT1G17880.1	15716105
AT5G35620.1	Zm00001d048526_P001	AT1G17880.1	15716105
AT5G35620.1	Zm00001d015852_P004	AT3G45140.1	11117257
AT5G35620.1	Zm00001d031449_P001	AT3G45140.1	11117257
AT5G35620.1	Zm00001d053675_P001	AT3G45140.1	11117257
AT5G35620.1	Zm00001d003147_P001	AT5G57870.1	21798944
AT5G35620.1	Zm00001d025777_P007	AT5G57870.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d032775_P002	Maize	cytosol, extracellular	81.94	84.29
TraesCS1B01G167100.1	Wheat	cytosol	75.46	77.99
Os10t0467600-01	Rice	cytosol, plastid	72.69	76.21
TraesCS1D01G146500.1	Wheat	golgi	73.61	76.08
TraesCS1A01G149200.1	Wheat	cytosol	74.07	75.12
HORVU1Hr1G039260.2	Barley	cytosol	71.3	73.33
GSMUA_Achr4P25000_001	Banana	cytosol	62.96	70.83
VIT_05s0049g01770.t01	Wine grape	cytosol	63.89	67.65
PGSC0003DMT400044186	Potato	cytosol	62.5	67.5
Solyc09g090580.2.1	Tomato	nucleus	62.5	67.5
GSMUA_Achr5P12940_001	Banana	cytosol	62.96	65.07
KRG90357	Soybean	endoplasmic reticulum	59.72	64.5
KRH33614	Soybean	cytosol	61.11	64.39
CDY38545	Canola	cytosol	57.87	63.13
Bra039484.1-P	Field mustard	cytosol	57.87	63.13
AT5G35620.1	Thale cress	cytosol	57.87	63.13
Bra035393.1-P	Field mustard	cytosol	56.48	61.31
CDY06456	Canola	cytosol	54.63	60.82
CDY33686	Canola	cytosol	56.02	60.8
CDX84118	Canola	cytosol	54.17	58.5
CDY49364	Canola	cytosol	53.7	58.0
Bra035531.1-P	Field mustard	cytosol	53.7	58.0
CDX74645	Canola	cytosol	56.94	53.95
Zm00001d041682_P001	Maize	cytosol, extracellular	43.98	43.58
Zm00001d041973_P001	Maize	cytosol	43.06	42.27
Zm00001d028515_P001	Maize	cytosol	29.17	27.51

Protein Annotations

MapMan:17.4.2.4.1	Gene3D:3.30.760.10	EntrezGene:541708	EMBL:AF076955	ProteinID:AQK65159.1	UniProt:B4FDT6
EMBL:BT035274	GO:GO:0000340	GO:GO:0003674	GO:GO:0003676	GO:GO:0003723	GO:GO:0003743
GO:GO:0005488	GO:GO:0005515	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737
GO:GO:0005845	GO:GO:0006412	GO:GO:0006413	GO:GO:0006417	GO:GO:0008135	GO:GO:0008150
GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0019538	GO:GO:0031370	InterPro:IPR023398
UniProt:O81482	PFAM:PF01652	ScanProsite:PS00813	PANTHER:PTHR11960	PANTHER:PTHR11960:SF12	SUPFAM:SSF55418
InterPro:TIF_eIF4e-like	InterPro:TIF_eIF_4E	InterPro:TIF_eIF_4E_CS	UniParc:UPI000012D3C9	EnsemblPlantsGene:Zm00001d014065	EnsemblPlants:Zm00001d014065_P001
EnsemblPlants:Zm00001d014065_T001	SEG:seg	:	:	:	:

Description

eucaryotic initiation factor7 eucaryotic initiation factor7

Coordinates

chr5:-:31254129..31259724

Molecular Weight (calculated)

24105.2 Da

IEP (calculated)

5.735

GRAVY (calculated)

-0.530

Length

216 amino acids

Sequence
(BLAST)

001: MAEVEAPATA VEAPAAAVAT TTPEVAAPEA GAATEAKGPH KLHRQWTFWY DIQTKTKSGA AWGTSLKKAY TFDTVEEFWS MYDQIFRPSK LSGNADFHLF
101: KAGVEPKWED PECANGGKWT VPCNRKATFE TMWLETLMAL IGEQFDETED ICGIVASVRA RGDKLALWTR TASNEAVQVN IGKKWKDVID YNDKITYTFH
201: DDSKRDKPSR GGRYTV

Best Arabidopsis Sequence Match ( AT5G35620.3 )
(BLAST)

001: MATDDVNEPL PAAAELPATE AEKQPHKLER KWSFWFDNQS KKGAAWGASL RKAYTFDTVE DFWGLHETIF QTSKLTANAE IHLFKAGVEP KWEDPECANG
101: GKWTWVVTAN RKEALDKGWL ETLMALIGEQ FDEADEICGV VASVRPQSKQ DKLSLWTRTK SNEAVLMGIG KKWKEILDVT DKITFNNHDD SRRSRFTV

Arabidopsis Description

EIF(ISO)4ELSP1 [Source:UniProtKB/TrEMBL;Acc:A0A178UEE3]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.