Factsheet for Zm00001d041973_P001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EES02138	Sorghum	cytosol	94.09	94.09
Zm00001d041682_P001	Maize	cytosol, extracellular	83.18	83.94
Os01t0970400-01	Rice	cytosol	81.82	79.3
TraesCS3D01G527800.1	Wheat	cytosol, golgi	72.27	73.95
TraesCS3A01G521500.1	Wheat	cytosol	72.27	73.95
TraesCS3B01G591300.1	Wheat	cytosol	71.82	73.49
HORVU3Hr1G113940.2	Barley	cytosol	69.55	71.16
CDX90426	Canola	cytosol	29.55	70.65
Bra012622.1-P	Field mustard	cytosol	41.82	70.23
CDY01513	Canola	extracellular	29.55	68.42
GSMUA_Achr3P02580_001	Banana	cytosol	67.27	64.63
Solyc02g021550.2.1	Tomato	cytosol	53.18	63.24
PGSC0003DMT400034911	Potato	cytosol	65.0	61.9
KRH21134	Soybean	cytosol	65.91	61.18
VIT_10s0003g02250.t01	Wine grape	cytosol	63.64	59.32
CDY61674	Canola	cytosol	60.45	58.33
GSMUA_Achr4P12820_001	Banana	cytosol	63.64	56.91
Bra013283.1-P	Field mustard	cytosol	58.64	56.58
CDX78824	Canola	cytosol	58.64	56.58
Bra021026.1-P	Field mustard	cytosol	59.55	55.98
AT4G18040.1	Thale cress	cytosol	59.55	55.74
CDX76547	Canola	cytosol	59.09	55.56
CDY08883	Canola	cytosol	58.64	55.13
KRH11115	Soybean	cytosol	55.0	51.71
AT1G29590.1	Thale cress	cytosol	52.73	48.33
AT1G29550.1	Thale cress	cytosol	52.27	47.92
CDY44305	Canola	cytosol	50.45	45.49
Bra030147.1-P	Field mustard	cytosol	50.0	45.08
Zm00001d032775_P002	Maize	cytosol, extracellular	42.73	44.76
CDX94676	Canola	cytosol	50.0	44.72
CDX99836	Canola	cytosol	49.55	43.95
Zm00001d014065_P001	Maize	cytosol, extracellular	42.27	43.06
Bra032325.1-P	Field mustard	cytosol	46.82	41.53
CDY48345	Canola	cytosol	46.36	41.13
Zm00001d028515_P001	Maize	cytosol	27.73	26.64

Protein Annotations

MapMan:17.4.2.3.1	Gene3D:3.30.760.10	EMBL:BT065427	UniProt:C0PAV8	GO:GO:0003674	GO:GO:0003676
GO:GO:0003723	GO:GO:0003743	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005737	GO:GO:0006412	GO:GO:0006413	GO:GO:0008135	GO:GO:0008150	GO:GO:0008152
GO:GO:0009058	GO:GO:0009987	GO:GO:0019538	InterPro:IPR023398	ProteinID:ONM34223.1	PFAM:PF01652
ScanProsite:PS00813	PANTHER:PTHR11960	PANTHER:PTHR11960:SF12	SUPFAM:SSF55418	InterPro:TIF_eIF4e-like	InterPro:TIF_eIF_4E
InterPro:TIF_eIF_4E_CS	UniParc:UPI000194B307	EnsemblPlantsGene:Zm00001d041973	EnsemblPlants:Zm00001d041973_P001	EnsemblPlants:Zm00001d041973_T001	SEG:seg

Description

Eukaryotic translation initiation factor 4E-1

Coordinates

chr3:-:146285064..146288191

Molecular Weight (calculated)

24594.7 Da

IEP (calculated)

6.344

GRAVY (calculated)

-0.585

Length

220 amino acids

Sequence
(BLAST)

001: MADEIDTRPA SAGSRGRPAH ATEDDDREEG EIAADAPSPA LPAAHPLEHS WTFWFDNPHG KNKMAAWGSS IRPIHTFSTV EDFWGLYNNI HHPSKLIGGA
101: DFHCFKNKIE PKWEDPICAN GGKWTISCGR GKSDTLWLHT LLAMIGEQFD YGDEICGAVV SVRSKQERIA IWTKNAANEA AQISIGKQWK EFLDYKDSIG
201: FIVHDDAKKM DKGLKNRYTV

Best Arabidopsis Sequence Match ( AT4G18040.1 )
(BLAST)

001: MAVEDTPKSV VTEEAKPNSI ENPIDRYHEE GDDAEEGEIA GGEGDGNVDE SSKSGVPESH PLEHSWTFWF DNPAVKSKQT SWGSSLRPVF TFSTVEEFWS
101: LYNNMKHPSK LAHGADFYCF KHIIEPKWED PICANGGKWT MTFPKEKSDK SWLYTLLALI GEQFDHGDEI CGAVVNIRGK QERISIWTKN ASNEAAQVSI
201: GKQWKEFLDY NNSIGFIIHE DAKKLDRNAK NAYTA

Arabidopsis Description

EIF4E1eIF4E1 [Source:UniProtKB/TrEMBL;Acc:A0A178UXU3]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.