Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY48345 | Canola | cytosol | 92.74 | 92.74 |
| Bra032325.1-P | Field mustard | cytosol | 92.74 | 92.74 |
| CDY44305 | Canola | cytosol | 77.02 | 78.28 |
| CDX94676 | Canola | cytosol | 77.02 | 77.64 |
| AT1G29590.1 | Thale cress | cytosol | 73.39 | 75.83 |
| AT1G29550.1 | Thale cress | cytosol | 72.98 | 75.42 |
| CDY01513 | Canola | extracellular | 23.79 | 62.11 |
| CDX90426 | Canola | cytosol | 22.58 | 60.87 |
| VIT_10s0003g02250.t01 | Wine grape | cytosol | 52.02 | 54.66 |
| CDY61674 | Canola | cytosol | 50.0 | 54.39 |
| CDX76547 | Canola | cytosol | 50.81 | 53.85 |
| KRH21134 | Soybean | cytosol | 51.21 | 53.59 |
| Solyc03g005870.2.1 | Tomato | cytosol, nucleus | 49.6 | 53.25 |
| CDX78824 | Canola | cytosol | 48.79 | 53.07 |
| GSMUA_Achr3P02580_001 | Banana | cytosol | 48.39 | 52.4 |
| PGSC0003DMT400034911 | Potato | cytosol | 48.39 | 51.95 |
| Solyc02g021550.2.1 | Tomato | cytosol | 38.71 | 51.89 |
| CDY08883 | Canola | cytosol | 48.79 | 51.71 |
| Zm00001d041682_P001 | Maize | cytosol, extracellular | 44.76 | 50.92 |
| HORVU3Hr1G113940.2 | Barley | cytosol | 43.95 | 50.7 |
| TraesCS3B01G591300.1 | Wheat | cytosol | 43.55 | 50.23 |
| TraesCS3A01G521500.1 | Wheat | cytosol | 43.55 | 50.23 |
| TraesCS3D01G527800.1 | Wheat | cytosol, golgi | 43.55 | 50.23 |
| EES02138 | Sorghum | cytosol | 44.35 | 50.0 |
| Zm00001d041973_P001 | Maize | cytosol | 43.95 | 49.55 |
| Os01t0970400-01 | Rice | cytosol | 43.95 | 48.02 |
| GSMUA_Achr4P12820_001 | Banana | cytosol | 45.16 | 45.53 |
| KRH11115 | Soybean | cytosol | 40.32 | 42.73 |
| CDY33686 | Canola | cytosol | 33.06 | 41.21 |
| CDY38545 | Canola | cytosol | 32.66 | 40.91 |
| CDY06456 | Canola | cytosol | 31.85 | 40.72 |
| CDY49364 | Canola | cytosol | 32.66 | 40.5 |
| CDX84118 | Canola | cytosol | 32.26 | 40.0 |
| CDX74645 | Canola | cytosol | 32.66 | 35.53 |
| CDX70795 | Canola | cytosol | 21.77 | 24.77 |
| CDY38487 | Canola | cytosol | 21.37 | 24.77 |
| CDX78777 | Canola | cytosol | 20.97 | 23.85 |
| CDY53257 | Canola | cytosol | 21.37 | 23.66 |
| CDY49143 | Canola | cytosol | 21.37 | 23.66 |
| CDY45630 | Canola | cytosol | 21.37 | 23.66 |
| CDY02645 | Canola | cytosol | 21.37 | 23.66 |
Protein Annotations
| MapMan:17.4.2.3.1 | Gene3D:3.30.760.10 | GO:A0A078EFD1 | EnsemblPlants:CDX99836 | ProteinID:CDX99836 | ProteinID:CDX99836.1 |
| GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003723 | GO:GO:0003743 | GO:GO:0005488 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0006412 | GO:GO:0006413 | GO:GO:0008135 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0019538 | EnsemblPlantsGene:GSBRNA2T00108549001 |
| InterPro:IPR023398 | PFAM:PF01652 | ScanProsite:PS00813 | PANTHER:PTHR11960 | PANTHER:PTHR11960:SF12 | SUPFAM:SSF55418 |
| InterPro:TIF_eIF4e-like | InterPro:TIF_eIF_4E | InterPro:TIF_eIF_4E_CS | UniParc:UPI0004EAFAC3 | : | : |
Description
BnaC05g22580D
Coordinates
chrLK031914:+:461288..462874
Molecular Weight (calculated)
27847.7 Da
IEP (calculated)
6.417
GRAVY (calculated)
-0.544
Length
248 amino acids
Sequence
(BLAST)
(BLAST)
001: MAVEGSSVSA IMAEEENLDP NTANHCPIQK HLPAIKAIGG GEEGPSKEQK ITCGGNGYVW KKSKSTTVIE HSHALQSSWT FWFDNPSSKS NQAAWGSSLR
101: TLYTFATIEE FWSLYNNIHP PTKWVHGSDL YCFKHEIEPK WEDPVCANGG KWTMMLPKAT LESNWLNTLL SLVGEQFEHG DEICGAVLNF RTRGDKISLW
201: TKNAANEEAQ ISIGKQWKER LGCNETIGFI FHEDAKTLDR NAKPRYTV
101: TLYTFATIEE FWSLYNNIHP PTKWVHGSDL YCFKHEIEPK WEDPVCANGG KWTMMLPKAT LESNWLNTLL SLVGEQFEHG DEICGAVLNF RTRGDKISLW
201: TKNAANEEAQ ISIGKQWKER LGCNETIGFI FHEDAKTLDR NAKPRYTV
001: MVVMDSPVSG RMADQNIDPN TTTSPSPIEK HVSAIKAISG DEKAPSKEKK NYASKKSTTV IQKSHCFQNS WTFWFDNPSS KSNQVIWGSS LRSLYTFATI
101: EEFWSLYNNI HPPTKWVSGS DLYCFKDKIE PKWEDPICAN GGKWTMFFPR ATLESNWLNT LLALVGEQFD QGDEICGAVL NFRTRGDRIS LWTKKAANEE
201: AQLSIGKQWK ELLGYNDTIG FIVHEDAKTL DRDAKRRYTV
101: EEFWSLYNNI HPPTKWVSGS DLYCFKDKIE PKWEDPICAN GGKWTMFFPR ATLESNWLNT LLALVGEQFD QGDEICGAVL NFRTRGDRIS LWTKKAANEE
201: AQLSIGKQWK ELLGYNDTIG FIVHEDAKTL DRDAKRRYTV
Arabidopsis Description
EIF4E2Eukaryotic translation initiation factor 4E-2 [Source:UniProtKB/Swiss-Prot;Acc:Q9C7P2]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.