CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 4
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc02g021550.2.1	Tomato	cytosol	51.71	65.41
KRH21134	Soybean	cytosol	65.38	64.56
Bra012622.1-P	Field mustard	cytosol	33.33	59.54
VIT_10s0003g02250.t01	Wine grape	cytosol	58.55	58.05
Zm00001d041682_P001	Maize	cytosol, extracellular	52.99	56.88
Os01t0970400-01	Rice	cytosol	53.42	55.07
EES02138	Sorghum	cytosol	51.71	55.0
Zm00001d041973_P001	Maize	cytosol	51.71	55.0
TraesCS3A01G521500.1	Wheat	cytosol	50.0	54.42
TraesCS3B01G591300.1	Wheat	cytosol	50.0	54.42
TraesCS3D01G527800.1	Wheat	cytosol, golgi	50.0	54.42
GSMUA_Achr3P02580_001	Banana	cytosol	52.99	54.15
HORVU3Hr1G113940.2	Barley	cytosol	49.15	53.49
PGSC0003DMT400034911	Potato	cytosol	52.14	52.81
CDY01513	Canola	extracellular	21.37	52.63
CDX76547	Canola	cytosol	52.56	52.56
Bra013283.1-P	Field mustard	cytosol	50.85	52.19
CDY61674	Canola	cytosol	50.85	52.19
CDX90426	Canola	cytosol	20.51	52.17
CDX78824	Canola	cytosol	50.43	51.75
Bra021026.1-P	Field mustard	cytosol	51.71	51.71
Solyc03g005870.2.1	Tomato	cytosol, nucleus	50.85	51.52
AT4G18040.1	Thale cress	cytosol	51.71	51.49
CDY08883	Canola	cytosol	51.28	51.28
GSMUA_Achr4P12820_001	Banana	cytosol	47.44	45.12
Bra030147.1-P	Field mustard	cytosol	45.3	43.44
CDY44305	Canola	cytosol	44.87	43.03
AT1G29590.1	Thale cress	cytosol	44.02	42.92
CDX94676	Canola	cytosol	44.44	42.28
AT1G29550.1	Thale cress	cytosol	43.16	42.08
Bra032325.1-P	Field mustard	cytosol	43.16	40.73
CDX99836	Canola	cytosol	42.73	40.32
KRG90357	Soybean	endoplasmic reticulum	34.19	40.0
CDY48345	Canola	cytosol	42.31	39.92
KRH33614	Soybean	cytosol	34.19	39.02
KRH08499	Soybean	cytosol	24.36	24.26
KRH70165	Soybean	cytosol	23.93	24.14

Protein Annotations

EntrezGene:100793288	MapMan:17.4.2.3.1	Gene3D:3.30.760.10	EMBL:ACUP02009184	EnsemblPlantsGene:GLYMA_15G089800	GO:GO:0003674
GO:GO:0003676	GO:GO:0003723	GO:GO:0003743	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005737	GO:GO:0006412	GO:GO:0006413	GO:GO:0008135	GO:GO:0008150
GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0016020	GO:GO:0016021	GO:GO:0019538
UniProt:I1MEZ1	InterPro:IPR023398	EnsemblPlants:KRH11115	ProteinID:KRH11115	ProteinID:KRH11115.1	PFAM:PF01652
ScanProsite:PS00813	PANTHER:PTHR11960	PANTHER:PTHR11960:SF12	SUPFAM:SSF55418	InterPro:TIF_eIF4e-like	InterPro:TIF_eIF_4E
InterPro:TIF_eIF_4E_CS	TMHMM:TMhelix	UniParc:UPI00023D2A2B	SEG:seg	:	:

Description

hypothetical protein

Coordinates

chr15:-:6916581..6918212

Molecular Weight (calculated)

26386.9 Da

IEP (calculated)

4.581

GRAVY (calculated)

-0.305

Length

234 amino acids

Sequence
(BLAST)

001: MVVEDAQKSA ITEDQNPSRV ANDNNDDEDL EEGEIPDDGD DGASATSKPP SALVRNPHPL ENSWTFWFDN PSAKSKQAAW GSSIRPIYTF ATVEEFWSIY
101: NNIHHPSKLG VGADFHCFKH KIEPKWEDPI CANGGKWTMT FQRGKSDTSW LYTLLAMIGE QFDHGDEICG AVVNVRSRQE KIAIWTKNAS NEAAQVTFLF
201: IQLVLVCFFF SLCLLLCCRW EGVREIYLAS SIML

Best Arabidopsis Sequence Match ( AT4G18040.1 )
(BLAST)

001: MAVEDTPKSV VTEEAKPNSI ENPIDRYHEE GDDAEEGEIA GGEGDGNVDE SSKSGVPESH PLEHSWTFWF DNPAVKSKQT SWGSSLRPVF TFSTVEEFWS
101: LYNNMKHPSK LAHGADFYCF KHIIEPKWED PICANGGKWT MTFPKEKSDK SWLYTLLALI GEQFDHGDEI CGAVVNIRGK QERISIWTKN ASNEAAQVSI
201: GKQWKEFLDY NNSIGFIIHE DAKKLDRNAK NAYTA

Arabidopsis Description

EIF4E1eIF4E1 [Source:UniProtKB/TrEMBL;Acc:A0A178UXU3]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.