Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 2
- mitochondrion 1
- cytoskeleton 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY01513 | Canola | extracellular | 38.72 | 95.79 |
| CDX90426 | Canola | cytosol | 37.02 | 94.57 |
| Bra012622.1-P | Field mustard | cytosol | 51.91 | 93.13 |
| Bra021026.1-P | Field mustard | cytosol | 88.09 | 88.46 |
| CDX76547 | Canola | cytosol | 88.09 | 88.46 |
| CDY08883 | Canola | cytosol | 87.66 | 88.03 |
| CDY61674 | Canola | cytosol | 82.98 | 85.53 |
| Bra013283.1-P | Field mustard | cytosol | 82.55 | 85.09 |
| CDX78824 | Canola | cytosol | 81.7 | 84.21 |
| KRH21134 | Soybean | cytosol | 65.53 | 64.98 |
| VIT_10s0003g02250.t01 | Wine grape | cytosol | 63.83 | 63.56 |
| Zm00001d041682_P001 | Maize | cytosol, extracellular | 57.87 | 62.39 |
| Solyc03g005870.2.1 | Tomato | cytosol, nucleus | 60.0 | 61.04 |
| HORVU3Hr1G113940.2 | Barley | cytosol | 55.32 | 60.47 |
| EES02138 | Sorghum | cytosol | 56.6 | 60.45 |
| TraesCS3D01G527800.1 | Wheat | cytosol, golgi | 54.89 | 60.0 |
| TraesCS3B01G591300.1 | Wheat | cytosol | 54.89 | 60.0 |
| TraesCS3A01G521500.1 | Wheat | cytosol | 54.89 | 60.0 |
| PGSC0003DMT400034911 | Potato | cytosol | 58.72 | 59.74 |
| Zm00001d041973_P001 | Maize | cytosol | 55.74 | 59.55 |
| Solyc02g021550.2.1 | Tomato | cytosol | 46.81 | 59.46 |
| Os01t0970400-01 | Rice | cytosol | 57.02 | 59.03 |
| GSMUA_Achr3P02580_001 | Banana | cytosol | 55.74 | 57.21 |
| AT1G29550.1 | Thale cress | cytosol | 53.62 | 52.5 |
| GSMUA_Achr4P12820_001 | Banana | cytosol | 54.89 | 52.44 |
| KRH11115 | Soybean | cytosol | 51.49 | 51.71 |
| AT1G29590.1 | Thale cress | cytosol | 52.34 | 51.25 |
| AT5G35620.1 | Thale cress | cytosol | 36.6 | 43.43 |
| AT5G18110.1 | Thale cress | cytosol | 25.96 | 27.6 |
Protein Annotations
| MapMan:17.4.2.3.1 | Gene3D:3.30.760.10 | EntrezGene:827529 | UniProt:A0A178UXU3 | EMBL:AB107250 | ProteinID:AEE83987.1 |
| EMBL:AF389286 | ArrayExpress:AT4G18040 | EnsemblPlantsGene:AT4G18040 | RefSeq:AT4G18040 | TAIR:AT4G18040 | RefSeq:AT4G18040-TAIR-G |
| EnsemblPlants:AT4G18040.1 | TAIR:AT4G18040.1 | EMBL:AY086496 | EMBL:AY093750 | Unigene:At.40 | ProteinID:CAB53645.1 |
| ProteinID:CAB78806.1 | Symbol:EIF4E | GO:GO:0000932 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003723 |
| GO:GO:0003743 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005634 | GO:GO:0005730 | GO:GO:0005737 | GO:GO:0005845 | GO:GO:0006412 | GO:GO:0006413 |
| GO:GO:0006417 | GO:GO:0008135 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009605 |
| GO:GO:0009607 | GO:GO:0009615 | GO:GO:0009987 | GO:GO:0010494 | GO:GO:0019538 | InterPro:IPR023398 |
| RefSeq:NP_193538.1 | UniProt:O23252 | ProteinID:OAO97924.1 | PFAM:PF01652 | PO:PO:0000013 | PO:PO:0000037 |
| PO:PO:0000084 | PO:PO:0000230 | PO:PO:0000293 | PO:PO:0001054 | PO:PO:0001078 | PO:PO:0001081 |
| PO:PO:0001185 | PO:PO:0004507 | PO:PO:0007064 | PO:PO:0007095 | PO:PO:0007098 | PO:PO:0007103 |
| PO:PO:0007115 | PO:PO:0007123 | PO:PO:0007611 | PO:PO:0007616 | PO:PO:0008019 | PO:PO:0009005 |
| PO:PO:0009006 | PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009029 | PO:PO:0009030 |
| PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 | PO:PO:0009052 | PO:PO:0020030 |
| PO:PO:0020038 | PO:PO:0020100 | PO:PO:0020137 | PO:PO:0025022 | PO:PO:0025281 | ScanProsite:PS00813 |
| PANTHER:PTHR11960 | PANTHER:PTHR11960:SF12 | UniProt:Q54A13 | SUPFAM:SSF55418 | InterPro:TIF_eIF4e-like | InterPro:TIF_eIF_4E |
| InterPro:TIF_eIF_4E_CS | UniParc:UPI0000000B6E | EMBL:Y10548 | SEG:seg | : | : |
Description
EIF4E1eIF4E1 [Source:UniProtKB/TrEMBL;Acc:A0A178UXU3]
Coordinates
chr4:-:10016530..10018232
Molecular Weight (calculated)
26520.6 Da
IEP (calculated)
4.764
GRAVY (calculated)
-0.710
Length
235 amino acids
Sequence
(BLAST)
(BLAST)
001: MAVEDTPKSV VTEEAKPNSI ENPIDRYHEE GDDAEEGEIA GGEGDGNVDE SSKSGVPESH PLEHSWTFWF DNPAVKSKQT SWGSSLRPVF TFSTVEEFWS
101: LYNNMKHPSK LAHGADFYCF KHIIEPKWED PICANGGKWT MTFPKEKSDK SWLYTLLALI GEQFDHGDEI CGAVVNIRGK QERISIWTKN ASNEAAQVSI
201: GKQWKEFLDY NNSIGFIIHE DAKKLDRNAK NAYTA
101: LYNNMKHPSK LAHGADFYCF KHIIEPKWED PICANGGKWT MTFPKEKSDK SWLYTLLALI GEQFDHGDEI CGAVVNIRGK QERISIWTKN ASNEAAQVSI
201: GKQWKEFLDY NNSIGFIIHE DAKKLDRNAK NAYTA
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.