Factsheet for Os01t0970400-01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 4
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d041973_P001	Maize	cytosol	79.3	81.82
EES02138	Sorghum	cytosol	79.3	81.82
Zm00001d041682_P001	Maize	cytosol, extracellular	76.65	79.82
TraesCS3D01G527800.1	Wheat	cytosol, golgi	70.48	74.42
TraesCS3A01G521500.1	Wheat	cytosol	70.48	74.42
TraesCS3B01G591300.1	Wheat	cytosol	70.04	73.95
HORVU3Hr1G113940.2	Barley	cytosol	68.72	72.56
CDX90426	Canola	cytosol	29.07	71.74
Bra012622.1-P	Field mustard	cytosol	40.53	70.23
CDY01513	Canola	extracellular	29.07	69.47
GSMUA_Achr3P02580_001	Banana	cytosol	66.08	65.5
Solyc02g021550.2.1	Tomato	cytosol	52.42	64.32
VIT_10s0003g02250.t01	Wine grape	cytosol	66.52	63.98
KRH21134	Soybean	cytosol	65.2	62.45
PGSC0003DMT400034911	Potato	cytosol	62.11	61.04
CDY61674	Canola	cytosol	59.03	58.77
Bra013283.1-P	Field mustard	cytosol	57.71	57.46
AT4G18040.1	Thale cress	cytosol	59.03	57.02
CDX78824	Canola	cytosol	57.27	57.02
Bra021026.1-P	Field mustard	cytosol	58.59	56.84
CDX76547	Canola	cytosol	58.15	56.41
CDY08883	Canola	cytosol	57.71	55.98
GSMUA_Achr4P12820_001	Banana	cytosol	60.35	55.69
KRH11115	Soybean	cytosol	55.07	53.42
AT1G29590.1	Thale cress	cytosol	51.98	49.17
AT1G29550.1	Thale cress	cytosol	51.54	48.75
CDY44305	Canola	cytosol	50.22	46.72
Os10t0467600-01	Rice	cytosol, plastid	42.29	46.6
Bra030147.1-P	Field mustard	cytosol	49.78	46.31
CDX94676	Canola	cytosol	49.78	45.94
CDX99836	Canola	cytosol	48.02	43.95
Bra032325.1-P	Field mustard	cytosol	46.26	42.34
CDY48345	Canola	cytosol	45.81	41.94
Os03t0262400-01	Rice	cytosol	25.99	25.99

Protein Annotations

MapMan:17.4.2.3.1	Gene3D:3.30.760.10	EntrezGene:4323837	EMBL:AK069207	EMBL:AK099169	EMBL:AM411441
ProteinID:BAB85343.1	ProteinID:BAF07439.1	ProteinID:BAS76420.1	ProteinID:EEE56085.1	GO:GO:0003674	GO:GO:0003676
GO:GO:0003723	GO:GO:0003743	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005737	GO:GO:0006412	GO:GO:0006413	GO:GO:0006417	GO:GO:0008135	GO:GO:0008150
GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0019538	InterPro:IPR023398	EnsemblPlantsGene:Os01g0970400
EnsemblPlants:Os01t0970400-01	UniProt:P48599	PFAM:PF01652	ScanProsite:PS00813	PANTHER:PTHR11960	PANTHER:PTHR11960:SF12
UniProt:Q0JFN9	SUPFAM:SSF55418	InterPro:TIF_eIF4e-like	InterPro:TIF_eIF_4E	InterPro:TIF_eIF_4E_CS	EMBL:U34597
UniParc:UPI0000001740	RefSeq:XP_015629641.1	SEG:seg	:	:	:

Description

cap-binding protein p26Eukaryotic translation initiation factor 4E-1 (eIF4E-1) (eIF-4E-1) (mRNA cap-binding protein) (eIF-4F 25 kDa subunit) (eIF-4F p26 subunit). (Os01t0970400-01)

Coordinates

chr1:+:42811967..42815157

Molecular Weight (calculated)

25466.6 Da

IEP (calculated)

6.174

GRAVY (calculated)

-0.750

Length

227 amino acids

Sequence
(BLAST)

001: MAEEHETRPP SAGRPPSSGR GRADDADERE EGEIADDDSG HAPPQANPAA PHPLEHAWTF WFDNPQGKSK QATWGSSIRP IHTFSTVEDF WSLYNNIHHP
101: SKLVVGADFH CFKNKIEPKW EDPICANGGK WTFSCGRGKS DTMWLHTLLA MIGEQFDYGD EICGAVVSVR GKQERIAIWT KNAANEAAQI SIGKQWKEFL
201: DYKDSIGFIV HDDAKKMDKG LKNRYTV

Best Arabidopsis Sequence Match ( AT4G18040.1 )
(BLAST)

001: MAVEDTPKSV VTEEAKPNSI ENPIDRYHEE GDDAEEGEIA GGEGDGNVDE SSKSGVPESH PLEHSWTFWF DNPAVKSKQT SWGSSLRPVF TFSTVEEFWS
101: LYNNMKHPSK LAHGADFYCF KHIIEPKWED PICANGGKWT MTFPKEKSDK SWLYTLLALI GEQFDHGDEI CGAVVNIRGK QERISIWTKN ASNEAAQVSI
201: GKQWKEFLDY NNSIGFIIHE DAKKLDRNAK NAYTA

Arabidopsis Description

EIF4E1eIF4E1 [Source:UniProtKB/TrEMBL;Acc:A0A178UXU3]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.