Factsheet for Bra030147.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 4
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY44305	Canola	cytosol	97.13	97.13
Bra032325.1-P	Field mustard	cytosol	77.87	76.61
AT1G29550.1	Thale cress	cytosol	70.49	71.67
AT1G29590.1	Thale cress	cytosol	70.08	71.25
Bra012622.1-P	Field mustard	cytosol	35.25	65.65
Bra013283.1-P	Field mustard	cytosol	50.0	53.51
Bra021026.1-P	Field mustard	cytosol	50.41	52.56
VIT_10s0003g02250.t01	Wine grape	cytosol	50.82	52.54
KRH21134	Soybean	cytosol	50.82	52.32
Solyc03g005870.2.1	Tomato	cytosol, nucleus	48.77	51.52
Solyc02g021550.2.1	Tomato	cytosol	38.93	51.35
Zm00001d041682_P001	Maize	cytosol, extracellular	45.49	50.92
GSMUA_Achr3P02580_001	Banana	cytosol	47.54	50.66
PGSC0003DMT400034911	Potato	cytosol	47.95	50.65
EES02138	Sorghum	cytosol	45.49	50.45
Zm00001d041973_P001	Maize	cytosol	45.08	50.0
Os01t0970400-01	Rice	cytosol	46.31	49.78
HORVU3Hr1G113940.2	Barley	cytosol	43.85	49.77
TraesCS3A01G521500.1	Wheat	cytosol	43.44	49.3
TraesCS3B01G591300.1	Wheat	cytosol	43.44	49.3
TraesCS3D01G527800.1	Wheat	cytosol, golgi	43.44	49.3
KRH11115	Soybean	cytosol	43.44	45.3
GSMUA_Achr4P12820_001	Banana	cytosol	44.26	43.9
Bra039484.1-P	Field mustard	cytosol	32.79	40.4
Bra035393.1-P	Field mustard	cytosol	32.38	39.7
Bra035531.1-P	Field mustard	cytosol	31.56	38.5
Bra002134.1-P	Field mustard	cytosol	20.9	26.98
Bra006439.1-P	Field mustard	cytosol	21.72	24.31
Bra023664.1-P	Field mustard	cytosol	21.72	23.66

Protein Annotations

MapMan:17.4.2.3.1	Gene3D:3.30.760.10	EnsemblPlantsGene:Bra030147	EnsemblPlants:Bra030147.1	EnsemblPlants:Bra030147.1-P	GO:GO:0003674
GO:GO:0003676	GO:GO:0003723	GO:GO:0003743	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005737	GO:GO:0006412	GO:GO:0006413	GO:GO:0008135	GO:GO:0008150
GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0019538	InterPro:IPR023398	UniProt:M4EMX7
PFAM:PF01652	ScanProsite:PS00813	PANTHER:PTHR11960	PANTHER:PTHR11960:SF12	SUPFAM:SSF55418	InterPro:TIF_eIF4e-like
InterPro:TIF_eIF_4E	InterPro:TIF_eIF_4E_CS	UniParc:UPI0002541032	:	:	:

Description

AT1G29550 (E=9e-104) | eukaryotic translation initiation factor 4E, putative / eIF-4E, putative / eIF4E, putative / mRNA cap-binding protein, putative

Coordinates

chrA07:-:6233038..6234378

Molecular Weight (calculated)

27545.6 Da

IEP (calculated)

7.501

GRAVY (calculated)

-0.521

Length

244 amino acids

Sequence
(BLAST)

001: MAVESSSLPA IMAEEENLDP NTTNLIRIEK HVPAIKAICG GGDEGPSKEK KIMCGGEKSK SNTAVKPWHS FQNSWTFWFD NPSSKSNQTT WGSSLRSLYT
101: FATIEEFWSL YNNMHPPTKW VHGADLYCFK HKIGPKWEDP VCADGGKWTM MFPKATLESS WLNTLLALVG EQFEKGDEIC GAVLNFRTRG DKISIWTKNA
201: ANEKAQINIG KQWKELLGYT ETIGFIFHED AKTLDRTAKP RYTV

Best Arabidopsis Sequence Match ( AT1G29550.1 )
(BLAST)

001: MVVTDSPVSG IMADQNIDPN TTTSPSPKEK HVSAIKAISG DEKAPSKEKK NYASKKSTTV IQKSHCFQNS WTFWFDNPSS KSNQVIWGSS LRSLYTFGTI
101: EEFWSLYNNI HPPTKWVSGA DLYCFKDKIE PKWEDPICAN GGKWSMMFPK ATLECNWLNT LLALVGEQFD QGDEICGAVL NFRARGDRIS LWTKNAANEE
201: AQLSIGKQWK ELLGYNETIG FIVHEDAKTL DRDAKRRYTV

Arabidopsis Description

EIF4E3Eukaryotic translation initiation factor 4E-3 [Source:UniProtKB/Swiss-Prot;Acc:Q9C7P6]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.