Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| AT1G29590.1 | Thale cress | cytosol | 95.0 | 95.0 |
| CDX99836 | Canola | cytosol | 75.42 | 72.98 |
| Bra032325.1-P | Field mustard | cytosol | 74.58 | 72.18 |
| CDY44305 | Canola | cytosol | 72.92 | 71.72 |
| CDY48345 | Canola | cytosol | 73.33 | 70.97 |
| Bra030147.1-P | Field mustard | cytosol | 71.67 | 70.49 |
| CDX94676 | Canola | cytosol | 72.08 | 70.33 |
| Zm00001d041682_P001 | Maize | cytosol, extracellular | 49.17 | 54.13 |
| HORVU3Hr1G113940.2 | Barley | cytosol | 48.33 | 53.95 |
| VIT_10s0003g02250.t01 | Wine grape | cytosol | 52.92 | 53.81 |
| AT4G18040.1 | Thale cress | cytosol | 52.5 | 53.62 |
| KRH21134 | Soybean | cytosol | 52.92 | 53.59 |
| GSMUA_Achr3P02580_001 | Banana | cytosol | 50.42 | 52.84 |
| PGSC0003DMT400034911 | Potato | cytosol | 50.83 | 52.81 |
| EES02138 | Sorghum | cytosol | 48.33 | 52.73 |
| TraesCS3A01G521500.1 | Wheat | cytosol | 47.08 | 52.56 |
| TraesCS3B01G591300.1 | Wheat | cytosol | 47.08 | 52.56 |
| TraesCS3D01G527800.1 | Wheat | cytosol, golgi | 47.08 | 52.56 |
| Zm00001d041973_P001 | Maize | cytosol | 47.92 | 52.27 |
| Solyc02g021550.2.1 | Tomato | cytosol | 40.0 | 51.89 |
| Os01t0970400-01 | Rice | cytosol | 48.75 | 51.54 |
| Solyc03g005870.2.1 | Tomato | cytosol, nucleus | 49.58 | 51.52 |
| GSMUA_Achr4P12820_001 | Banana | cytosol | 47.08 | 45.94 |
| KRH11115 | Soybean | cytosol | 42.08 | 43.16 |
| AT5G35620.1 | Thale cress | cytosol | 33.33 | 40.4 |
| AT5G18110.1 | Thale cress | cytosol | 23.75 | 25.79 |
Protein Annotations
| MapMan:17.4.2.3.1 | Gene3D:3.30.760.10 | EntrezGene:839832 | UniProt:A0A178W1I7 | ProteinID:AAG51734.1 | ProteinID:AEE31102.1 |
| ArrayExpress:AT1G29550 | EnsemblPlantsGene:AT1G29550 | RefSeq:AT1G29550 | TAIR:AT1G29550 | RefSeq:AT1G29550-TAIR-G | EnsemblPlants:AT1G29550.1 |
| TAIR:AT1G29550.1 | Unigene:At.40709 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003723 | GO:GO:0003743 |
| GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0006412 |
| GO:GO:0006413 | GO:GO:0006417 | GO:GO:0008135 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 |
| GO:GO:0009987 | GO:GO:0019538 | InterPro:IPR023398 | RefSeq:NP_174248.1 | ProteinID:OAP12367.1 | PFAM:PF01652 |
| PO:PO:0000293 | PO:PO:0001016 | PO:PO:0001017 | PO:PO:0025195 | PO:PO:0025281 | ScanProsite:PS00813 |
| PANTHER:PTHR11960 | PANTHER:PTHR11960:SF12 | UniProt:Q9C7P6 | SUPFAM:SSF55418 | InterPro:TIF_eIF4e-like | InterPro:TIF_eIF_4E |
| InterPro:TIF_eIF_4E_CS | UniParc:UPI00000A18E8 | : | : | : | : |
Description
EIF4E3Eukaryotic translation initiation factor 4E-3 [Source:UniProtKB/Swiss-Prot;Acc:Q9C7P6]
Coordinates
chr1:+:10330425..10332326
Molecular Weight (calculated)
27141.9 Da
IEP (calculated)
7.406
GRAVY (calculated)
-0.555
Length
240 amino acids
Sequence
(BLAST)
(BLAST)
001: MVVTDSPVSG IMADQNIDPN TTTSPSPKEK HVSAIKAISG DEKAPSKEKK NYASKKSTTV IQKSHCFQNS WTFWFDNPSS KSNQVIWGSS LRSLYTFGTI
101: EEFWSLYNNI HPPTKWVSGA DLYCFKDKIE PKWEDPICAN GGKWSMMFPK ATLECNWLNT LLALVGEQFD QGDEICGAVL NFRARGDRIS LWTKNAANEE
201: AQLSIGKQWK ELLGYNETIG FIVHEDAKTL DRDAKRRYTV
101: EEFWSLYNNI HPPTKWVSGA DLYCFKDKIE PKWEDPICAN GGKWSMMFPK ATLECNWLNT LLALVGEQFD QGDEICGAVL NFRARGDRIS LWTKNAANEE
201: AQLSIGKQWK ELLGYNETIG FIVHEDAKTL DRDAKRRYTV
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.