CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY44305	Canola	cytosol	91.87	92.62
CDX99836	Canola	cytosol	77.64	77.02
CDY48345	Canola	cytosol	77.64	77.02
AT1G29550.1	Thale cress	cytosol	70.33	72.08
AT1G29590.1	Thale cress	cytosol	69.92	71.67
CDY01513	Canola	extracellular	24.39	63.16
CDX90426	Canola	cytosol	21.95	58.7
CDY61674	Canola	cytosol	50.41	54.39
CDX78824	Canola	cytosol	50.0	53.95
CDX76547	Canola	cytosol	51.22	53.85
CDY08883	Canola	cytosol	50.0	52.56
VIT_10s0003g02250.t01	Wine grape	cytosol	50.41	52.54
KRH21134	Soybean	cytosol	50.41	52.32
Solyc02g021550.2.1	Tomato	cytosol	38.62	51.35
GSMUA_Achr3P02580_001	Banana	cytosol	47.56	51.09
Zm00001d041682_P001	Maize	cytosol, extracellular	45.12	50.92
EES02138	Sorghum	cytosol	45.12	50.45
HORVU3Hr1G113940.2	Barley	cytosol	43.9	50.23
Zm00001d041973_P001	Maize	cytosol	44.72	50.0
Os01t0970400-01	Rice	cytosol	45.94	49.78
Solyc03g005870.2.1	Tomato	cytosol, nucleus	46.34	49.35
PGSC0003DMT400034911	Potato	cytosol	46.34	49.35
TraesCS3B01G591300.1	Wheat	cytosol	43.09	49.3
TraesCS3A01G521500.1	Wheat	cytosol	43.09	49.3
TraesCS3D01G527800.1	Wheat	cytosol, golgi	43.09	49.3
GSMUA_Achr4P12820_001	Banana	cytosol	45.53	45.53
KRH11115	Soybean	cytosol	42.28	44.44
CDY38545	Canola	cytosol	32.11	39.9
CDY33686	Canola	cytosol	32.11	39.7
CDY49364	Canola	cytosol	32.11	39.5
CDY06456	Canola	cytosol	30.89	39.18
CDX84118	Canola	cytosol	31.71	39.0
CDX74645	Canola	cytosol	32.11	34.65
CDY38487	Canola	cytosol	23.17	26.64
CDX70795	Canola	cytosol	22.76	25.69
CDY02645	Canola	cytosol	23.17	25.45
CDY45630	Canola	cytosol	23.17	25.45
CDY53257	Canola	cytosol	23.17	25.45
CDY49143	Canola	cytosol	23.17	25.45
CDX78777	Canola	cytosol	21.95	24.77

Protein Annotations

MapMan:17.4.2.3.1	Gene3D:3.30.760.10	GO:A0A078DZT1	EnsemblPlants:CDX94676	ProteinID:CDX94676	ProteinID:CDX94676.1
GO:GO:0003674	GO:GO:0003676	GO:GO:0003723	GO:GO:0003743	GO:GO:0005488	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0006412	GO:GO:0006413	GO:GO:0008135
GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0019538	EnsemblPlantsGene:GSBRNA2T00158016001
InterPro:IPR023398	PFAM:PF01652	ScanProsite:PS00813	PANTHER:PTHR11960	PANTHER:PTHR11960:SF12	SUPFAM:SSF55418
InterPro:TIF_eIF4e-like	InterPro:TIF_eIF_4E	InterPro:TIF_eIF_4E_CS	UniParc:UPI0004EE14D0	:	:

Description

BnaC07g09820D

Coordinates

chrLK031883:+:997488..999017

Molecular Weight (calculated)

27705.7 Da

IEP (calculated)

7.019

GRAVY (calculated)

-0.548

Length

246 amino acids

Sequence
(BLAST)

001: MAVESSSLPA IMAEEENLDP NTPNLIRIEK HVPAIKAICG GGDEGPSKEK KIMCGGKKSK SKSNTAVQPS HSFRNSWTFW FDNPSSKSNQ ATWGSSLRSL
101: YTFATIEEFW SLYNNMHPPS KWVHGADLYC FKDRIEPKWE DPVCADGGKW TMMFPKATLE SNWLNTLLAL VGEQFEQGDD ICGAVLNFRT RGDKISIWTK
201: NAADEKAQIS IGKQWKELLG YTETIGFIFH EDAKTLDRTA KPRYTV

Best Arabidopsis Sequence Match ( AT1G29550.1 )
(BLAST)

001: MVVTDSPVSG IMADQNIDPN TTTSPSPKEK HVSAIKAISG DEKAPSKEKK NYASKKSTTV IQKSHCFQNS WTFWFDNPSS KSNQVIWGSS LRSLYTFGTI
101: EEFWSLYNNI HPPTKWVSGA DLYCFKDKIE PKWEDPICAN GGKWSMMFPK ATLECNWLNT LLALVGEQFD QGDEICGAVL NFRARGDRIS LWTKNAANEE
201: AQLSIGKQWK ELLGYNETIG FIVHEDAKTL DRDAKRRYTV

Arabidopsis Description

EIF4E3Eukaryotic translation initiation factor 4E-3 [Source:UniProtKB/Swiss-Prot;Acc:Q9C7P6]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.