Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra035531.1-P | Field mustard | cytosol | 99.5 | 99.5 |
| CDX84118 | Canola | cytosol | 98.0 | 98.0 |
| CDY33686 | Canola | cytosol | 81.0 | 81.41 |
| CDY38545 | Canola | cytosol | 80.5 | 81.31 |
| CDY06456 | Canola | cytosol | 77.0 | 79.38 |
| AT5G35620.1 | Thale cress | cytosol | 78.0 | 78.79 |
| CDX74645 | Canola | cytosol | 81.0 | 71.05 |
| GSMUA_Achr4P25000_001 | Banana | cytosol | 64.0 | 66.67 |
| PGSC0003DMT400044186 | Potato | cytosol | 66.0 | 66.0 |
| VIT_05s0049g01770.t01 | Wine grape | cytosol | 65.5 | 64.22 |
| Solyc09g090580.2.1 | Tomato | nucleus | 62.5 | 62.5 |
| Os10t0467600-01 | Rice | cytosol, plastid | 63.5 | 61.65 |
| Zm00001d032775_P002 | Maize | cytosol, extracellular | 62.0 | 59.05 |
| EER94108 | Sorghum | cytosol | 61.5 | 58.57 |
| KRG90357 | Soybean | endoplasmic reticulum | 58.5 | 58.5 |
| KRH33614 | Soybean | cytosol | 59.0 | 57.56 |
| GSMUA_Achr5P12940_001 | Banana | cytosol | 60.0 | 57.42 |
| TraesCS1B01G167100.1 | Wheat | cytosol | 59.0 | 56.46 |
| TraesCS1D01G146500.1 | Wheat | golgi | 58.0 | 55.5 |
| HORVU1Hr1G039260.2 | Barley | cytosol | 57.5 | 54.76 |
| TraesCS1A01G149200.1 | Wheat | cytosol | 58.0 | 54.46 |
| Zm00001d014065_P001 | Maize | cytosol, extracellular | 58.0 | 53.7 |
| CDX90426 | Canola | cytosol | 21.0 | 45.65 |
| CDY01513 | Canola | extracellular | 21.0 | 44.21 |
| CDX78824 | Canola | cytosol | 45.0 | 39.47 |
| CDY61674 | Canola | cytosol | 44.0 | 38.6 |
| CDX76547 | Canola | cytosol | 45.0 | 38.46 |
| CDY08883 | Canola | cytosol | 44.0 | 37.61 |
| CDX99836 | Canola | cytosol | 40.5 | 32.66 |
| CDX94676 | Canola | cytosol | 39.5 | 32.11 |
| CDY44305 | Canola | cytosol | 39.0 | 31.97 |
| CDY48345 | Canola | cytosol | 39.0 | 31.45 |
| CDY38487 | Canola | cytosol | 29.0 | 27.1 |
| CDX78777 | Canola | cytosol | 29.5 | 27.06 |
| CDX70795 | Canola | cytosol | 29.0 | 26.61 |
| CDY53257 | Canola | cytosol | 28.5 | 25.45 |
| CDY49143 | Canola | cytosol | 28.5 | 25.45 |
| CDY45630 | Canola | cytosol | 28.5 | 25.45 |
| CDY02645 | Canola | cytosol | 28.5 | 25.45 |
Protein Annotations
| MapMan:17.4.2.4.1 | Gene3D:3.30.760.10 | GO:A0A078IIY3 | UniProt:A0A078IIY3 | EnsemblPlants:CDY49364 | ProteinID:CDY49364 |
| ProteinID:CDY49364.1 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003723 | GO:GO:0003743 | GO:GO:0005488 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0006412 | GO:GO:0006413 |
| GO:GO:0008135 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0019538 |
| EnsemblPlantsGene:GSBRNA2T00092906001 | InterPro:IPR023398 | PFAM:PF01652 | ScanProsite:PS00813 | PANTHER:PTHR11960 | PANTHER:PTHR11960:SF12 |
| SUPFAM:SSF55418 | InterPro:TIF_eIF4e-like | InterPro:TIF_eIF_4E | InterPro:TIF_eIF_4E_CS | UniParc:UPI0004EDEFA0 | : |
Description
BnaA08g29940DBnaA08g29940D protein [Source:UniProtKB/TrEMBL;Acc:A0A078IIY3]
Coordinates
chrLK032827:-:76863..78145
Molecular Weight (calculated)
22687.7 Da
IEP (calculated)
5.735
GRAVY (calculated)
-0.567
Length
200 amino acids
Sequence
(BLAST)
(BLAST)
001: MATEDVNEAL AAAEVTAIES TEKQQPPHKL ERKWSFWFDN QSKPKQGAAW GASLRKACTF DTVEDFWGLH ETIFVPSRLT PNADIHMFKA GVEPKWEDPE
101: CANGGKWTYV VTNNRKQALD KAWLETLMAL VGEQFDEADE ICGVVASVRP KQDKLSLWTR TKSNEAVLMG IGKKWKEILD VTDKISFTNH DDARRSRFSV
101: CANGGKWTYV VTNNRKQALD KAWLETLMAL VGEQFDEADE ICGVVASVRP KQDKLSLWTR TKSNEAVLMG IGKKWKEILD VTDKISFTNH DDARRSRFSV
001: MATDDVNEPL PAAAELPATE AEKQPHKLER KWSFWFDNQS KKGAAWGASL RKAYTFDTVE DFWGLHETIF QTSKLTANAE IHLFKAGVEP KWEDPECANG
101: GKWTWVVTAN RKEALDKGWL ETLMALIGEQ FDEADEICGV VASVRPQSKQ DKLSLWTRTK SNEAVLMGIG KKWKEILDVT DKITFNNHDD SRRSRFTV
101: GKWTWVVTAN RKEALDKGWL ETLMALIGEQ FDEADEICGV VASVRPQSKQ DKLSLWTRTK SNEAVLMGIG KKWKEILDVT DKITFNNHDD SRRSRFTV
Arabidopsis Description
EIF(ISO)4ELSP1 [Source:UniProtKB/TrEMBL;Acc:A0A178UEE3]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.