Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 3
- mitochondrion 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRG90357 | Soybean | endoplasmic reticulum | 92.2 | 94.5 |
| PGSC0003DMT400044186 | Potato | cytosol | 70.24 | 72.0 |
| GSMUA_Achr4P25000_001 | Banana | cytosol | 67.32 | 71.88 |
| VIT_05s0049g01770.t01 | Wine grape | cytosol | 69.76 | 70.1 |
| Solyc09g090580.2.1 | Tomato | nucleus | 68.29 | 70.0 |
| GSMUA_Achr5P12940_001 | Banana | cytosol | 68.78 | 67.46 |
| TraesCS1B01G167100.1 | Wheat | cytosol | 67.8 | 66.51 |
| TraesCS1D01G146500.1 | Wheat | golgi | 65.85 | 64.59 |
| Os10t0467600-01 | Rice | cytosol, plastid | 64.88 | 64.56 |
| EER94108 | Sorghum | cytosol | 65.85 | 64.29 |
| TraesCS1A01G149200.1 | Wheat | cytosol | 66.34 | 63.85 |
| HORVU1Hr1G039260.2 | Barley | cytosol | 65.37 | 63.81 |
| Zm00001d032775_P002 | Maize | cytosol, extracellular | 62.93 | 61.43 |
| Zm00001d014065_P001 | Maize | cytosol, extracellular | 64.39 | 61.11 |
| AT5G35620.1 | Thale cress | cytosol | 59.02 | 61.11 |
| CDY38545 | Canola | cytosol | 58.54 | 60.61 |
| Bra039484.1-P | Field mustard | cytosol | 58.54 | 60.61 |
| CDY06456 | Canola | cytosol | 57.07 | 60.31 |
| Bra035393.1-P | Field mustard | cytosol | 58.54 | 60.3 |
| CDY33686 | Canola | cytosol | 57.56 | 59.3 |
| CDY49364 | Canola | cytosol | 57.56 | 59.0 |
| Bra035531.1-P | Field mustard | cytosol | 57.56 | 59.0 |
| CDX84118 | Canola | cytosol | 57.07 | 58.5 |
| CDX74645 | Canola | cytosol | 59.02 | 53.07 |
| KRH21134 | Soybean | cytosol | 45.85 | 39.66 |
| KRH11115 | Soybean | cytosol | 39.02 | 34.19 |
| KRH70165 | Soybean | cytosol | 29.27 | 25.86 |
| KRH08499 | Soybean | cytosol | 29.27 | 25.53 |
Protein Annotations
| EntrezGene:100499799 | MapMan:17.4.2.4.1 | Gene3D:3.30.760.10 | EMBL:ACUP02006543 | EnsemblPlantsGene:GLYMA_10G136100 | GO:GO:0003674 |
| GO:GO:0003676 | GO:GO:0003723 | GO:GO:0003743 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005737 | GO:GO:0006412 | GO:GO:0006413 | GO:GO:0008135 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0019538 | UniProt:I1LAR7 | InterPro:IPR023398 |
| EnsemblPlants:KRH33614 | ProteinID:KRH33614 | ProteinID:KRH33614.1 | PFAM:PF01652 | ScanProsite:PS00813 | PANTHER:PTHR11960 |
| PANTHER:PTHR11960:SF12 | SUPFAM:SSF55418 | InterPro:TIF_eIF4e-like | InterPro:TIF_eIF_4E | InterPro:TIF_eIF_4E_CS | UniParc:UPI00023CD2B9 |
| SEG:seg | : | : | : | : | : |
Description
hypothetical protein
Coordinates
chr10:+:36774984..36778682
Molecular Weight (calculated)
23379.5 Da
IEP (calculated)
5.783
GRAVY (calculated)
-0.543
Length
205 amino acids
Sequence
(BLAST)
(BLAST)
001: MATSEEVVAA APEAAAPEAG LKHKLERKWT FWCDNQSKPK QGAAWGTSLR KVYTFDTVEE FWCLYDQVFK PSKLQINADF HLFKTGIDPK WEDPECANGG
101: KWSITSNSGR KANLDNMWLE TMMALIGEQF EDAEDICGVV ASVRQWQDKL SLWTKTAANE AAQVFYYLMS IGRKWKEIID VNDKITYNFH DDSRSKGATK
201: GRYTV
101: KWSITSNSGR KANLDNMWLE TMMALIGEQF EDAEDICGVV ASVRQWQDKL SLWTKTAANE AAQVFYYLMS IGRKWKEIID VNDKITYNFH DDSRSKGATK
201: GRYTV
001: MATDDVNEPL PAAAELPATE AEKQPHKLER KWSFWFDNQS KKGAAWGASL RKAYTFDTVE DFWGLHETIF QTSKLTANAE IHLFKAGVEP KWEDPECANG
101: GKWTWVVTAN RKEALDKGWL ETLMALIGEQ FDEADEICGV VASVRPQSKQ DKLSLWTRTK SNEAVLMGIG KKWKEILDVT DKITFNNHDD SRRSRFTV
101: GKWTWVVTAN RKEALDKGWL ETLMALIGEQ FDEADEICGV VASVRPQSKQ DKLSLWTRTK SNEAVLMGIG KKWKEILDVT DKITFNNHDD SRRSRFTV
Arabidopsis Description
EIF(ISO)4ELSP1 [Source:UniProtKB/TrEMBL;Acc:A0A178UEE3]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.