Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 3
- mitochondrion 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra035393.1-P | Field mustard | cytosol | 85.86 | 85.43 |
| CDY33686 | Canola | cytosol | 85.35 | 84.92 |
| CDY38545 | Canola | cytosol | 84.85 | 84.85 |
| Bra039484.1-P | Field mustard | cytosol | 84.85 | 84.85 |
| CDY06456 | Canola | cytosol | 78.28 | 79.9 |
| CDY49364 | Canola | cytosol | 78.79 | 78.0 |
| Bra035531.1-P | Field mustard | cytosol | 78.28 | 77.5 |
| CDX84118 | Canola | cytosol | 77.27 | 76.5 |
| CDX74645 | Canola | cytosol | 85.35 | 74.12 |
| VIT_05s0049g01770.t01 | Wine grape | cytosol | 67.68 | 65.69 |
| GSMUA_Achr4P25000_001 | Banana | cytosol | 63.13 | 65.1 |
| Solyc09g090580.2.1 | Tomato | nucleus | 65.66 | 65.0 |
| PGSC0003DMT400044186 | Potato | cytosol | 65.15 | 64.5 |
| Os10t0467600-01 | Rice | cytosol, plastid | 64.65 | 62.14 |
| KRG90357 | Soybean | endoplasmic reticulum | 60.61 | 60.0 |
| EER94108 | Sorghum | cytosol | 63.13 | 59.52 |
| KRH33614 | Soybean | cytosol | 61.11 | 59.02 |
| TraesCS1B01G167100.1 | Wheat | cytosol | 62.12 | 58.85 |
| Zm00001d032775_P002 | Maize | cytosol, extracellular | 62.12 | 58.57 |
| GSMUA_Achr5P12940_001 | Banana | cytosol | 61.11 | 57.89 |
| TraesCS1D01G146500.1 | Wheat | golgi | 61.11 | 57.89 |
| Zm00001d014065_P001 | Maize | cytosol, extracellular | 63.13 | 57.87 |
| HORVU1Hr1G039260.2 | Barley | cytosol | 61.11 | 57.62 |
| TraesCS1A01G149200.1 | Wheat | cytosol | 61.11 | 56.81 |
| AT4G18040.1 | Thale cress | cytosol | 43.43 | 36.6 |
| AT1G29590.1 | Thale cress | cytosol | 40.91 | 33.75 |
| AT1G29550.1 | Thale cress | cytosol | 40.4 | 33.33 |
| AT5G18110.1 | Thale cress | cytosol | 28.28 | 25.34 |
Protein Annotations
| MapMan:17.4.2.4.1 | Gene3D:3.30.760.10 | EntrezGene:833534 | UniProt:A0A178UEE3 | ProteinID:AAN06825.1 | ProteinID:AED93991.1 |
| ProteinID:AED93992.1 | ProteinID:ANM70787.1 | ArrayExpress:AT5G35620 | EnsemblPlantsGene:AT5G35620 | RefSeq:AT5G35620 | TAIR:AT5G35620 |
| RefSeq:AT5G35620-TAIR-G | EnsemblPlants:AT5G35620.1 | TAIR:AT5G35620.1 | EMBL:AY054630 | EMBL:AY081514 | EMBL:AY086315 |
| Unigene:At.20245 | ProteinID:BAB09303.1 | EMBL:BX831945 | GO:GO:0000340 | GO:GO:0003674 | GO:GO:0003676 |
| GO:GO:0003723 | GO:GO:0003743 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005634 | GO:GO:0005737 | GO:GO:0005829 | GO:GO:0005845 | GO:GO:0006412 |
| GO:GO:0006413 | GO:GO:0006417 | GO:GO:0006950 | GO:GO:0008135 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0009058 | GO:GO:0009605 | GO:GO:0009607 | GO:GO:0009615 | GO:GO:0009987 | GO:GO:0019538 |
| GO:GO:0050687 | InterPro:IPR023398 | Symbol:LSP1 | RefSeq:NP_001332369.1 | RefSeq:NP_198412.1 | RefSeq:NP_974852.1 |
| UniProt:O04663 | ProteinID:OAO92029.1 | PFAM:PF01652 | PO:PO:0000005 | PO:PO:0000013 | PO:PO:0000037 |
| PO:PO:0000084 | PO:PO:0000230 | PO:PO:0000293 | PO:PO:0001016 | PO:PO:0001017 | PO:PO:0001054 |
| PO:PO:0001078 | PO:PO:0001081 | PO:PO:0001185 | PO:PO:0004507 | PO:PO:0007064 | PO:PO:0007095 |
| PO:PO:0007098 | PO:PO:0007103 | PO:PO:0007115 | PO:PO:0007123 | PO:PO:0007131 | PO:PO:0007611 |
| PO:PO:0007616 | PO:PO:0008019 | PO:PO:0009005 | PO:PO:0009006 | PO:PO:0009009 | PO:PO:0009010 |
| PO:PO:0009025 | PO:PO:0009029 | PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 |
| PO:PO:0009047 | PO:PO:0009052 | PO:PO:0020030 | PO:PO:0020038 | PO:PO:0020100 | PO:PO:0020137 |
| PO:PO:0025022 | PO:PO:0025195 | PO:PO:0025281 | ScanProsite:PS00813 | PANTHER:PTHR11960 | PANTHER:PTHR11960:SF12 |
| SUPFAM:SSF55418 | InterPro:TIF_eIF4e-like | InterPro:TIF_eIF_4E | InterPro:TIF_eIF_4E_CS | EMBL:U62044 | UniParc:UPI0000000E28 |
| EMBL:Y10547 | SEG:seg | : | : | : | : |
Description
EIF(ISO)4ELSP1 [Source:UniProtKB/TrEMBL;Acc:A0A178UEE3]
Coordinates
chr5:-:13824621..13826444
Molecular Weight (calculated)
22515.4 Da
IEP (calculated)
5.402
GRAVY (calculated)
-0.615
Length
198 amino acids
Sequence
(BLAST)
(BLAST)
001: MATDDVNEPL PAAAELPATE AEKQPHKLER KWSFWFDNQS KKGAAWGASL RKAYTFDTVE DFWGLHETIF QTSKLTANAE IHLFKAGVEP KWEDPECANG
101: GKWTWVVTAN RKEALDKGWL ETLMALIGEQ FDEADEICGV VASVRPQSKQ DKLSLWTRTK SNEAVLMGIG KKWKEILDVT DKITFNNHDD SRRSRFTV
101: GKWTWVVTAN RKEALDKGWL ETLMALIGEQ FDEADEICGV VASVRPQSKQ DKLSLWTRTK SNEAVLMGIG KKWKEILDVT DKITFNNHDD SRRSRFTV
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.