Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 2
- mitochondrion 1
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS1D01G146500.1 | Wheat | golgi | 97.18 | 99.04 |
| TraesCS1B01G167100.1 | Wheat | cytosol | 93.43 | 95.22 |
| HORVU1Hr1G039260.2 | Barley | cytosol | 91.08 | 92.38 |
| EER94108 | Sorghum | cytosol | 73.71 | 74.76 |
| Zm00001d014065_P001 | Maize | cytosol, extracellular | 75.12 | 74.07 |
| Os10t0467600-01 | Rice | cytosol, plastid | 70.42 | 72.82 |
| Zm00001d032775_P002 | Maize | cytosol, extracellular | 71.36 | 72.38 |
| GSMUA_Achr4P25000_001 | Banana | cytosol | 63.38 | 70.31 |
| KRG90357 | Soybean | endoplasmic reticulum | 65.26 | 69.5 |
| VIT_05s0049g01770.t01 | Wine grape | cytosol | 66.2 | 69.12 |
| PGSC0003DMT400044186 | Potato | cytosol | 62.91 | 67.0 |
| KRH33614 | Soybean | cytosol | 63.85 | 66.34 |
| GSMUA_Achr5P12940_001 | Banana | cytosol | 64.79 | 66.03 |
| Solyc09g090580.2.1 | Tomato | nucleus | 61.97 | 66.0 |
| CDY38545 | Canola | cytosol | 57.28 | 61.62 |
| Bra039484.1-P | Field mustard | cytosol | 57.28 | 61.62 |
| Bra035393.1-P | Field mustard | cytosol | 57.28 | 61.31 |
| AT5G35620.1 | Thale cress | cytosol | 56.81 | 61.11 |
| CDY33686 | Canola | cytosol | 56.34 | 60.3 |
| CDY06456 | Canola | cytosol | 53.52 | 58.76 |
| CDX84118 | Canola | cytosol | 54.46 | 58.0 |
| Bra035531.1-P | Field mustard | cytosol | 54.46 | 58.0 |
| CDY49364 | Canola | cytosol | 54.46 | 58.0 |
| CDX74645 | Canola | cytosol | 56.81 | 53.07 |
| TraesCS3A01G521500.1 | Wheat | cytosol | 44.6 | 44.19 |
| TraesCS4A01G087900.1 | Wheat | cytosol | 30.05 | 27.59 |
Protein Annotations
| MapMan:17.4.2.4.1 | Gene3D:3.30.760.10 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003723 | GO:GO:0003743 |
| GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0005737 |
| GO:GO:0005829 | GO:GO:0006412 | GO:GO:0006413 | GO:GO:0006950 | GO:GO:0008135 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009605 | GO:GO:0009607 | GO:GO:0009615 | GO:GO:0009987 |
| GO:GO:0019538 | GO:GO:0050687 | InterPro:IPR023398 | PFAM:PF01652 | ScanProsite:PS00813 | PANTHER:PTHR11960 |
| PANTHER:PTHR11960:SF12 | SUPFAM:SSF55418 | InterPro:TIF_eIF4e-like | InterPro:TIF_eIF_4E | InterPro:TIF_eIF_4E_CS | EnsemblPlantsGene:TraesCS1A01G149200 |
| EnsemblPlants:TraesCS1A01G149200.1 | SEG:seg | : | : | : | : |
Description
No Description!
Coordinates
chr1A:+:256819354..256822493
Molecular Weight (calculated)
23962.1 Da
IEP (calculated)
5.157
GRAVY (calculated)
-0.521
Length
213 amino acids
Sequence
(BLAST)
(BLAST)
001: MAEVEAALPV AATETPEVAA ESDAGAAEAK GPHKLQRQWT FWYDIQTKPK PGAAWGTSLK KGYTFDTVEE FWCFFGSLYD QIFRPSKLVG SADFHLFKAG
101: VEPKWEDPEC ANGGKWTVIS SRKANLDTMW LETCMALIGE QFDESQEICG VVASVRQRQD KLSLWTKTAS NEAVQVDIGK KWKEVIDYND KMVYSFHDDS
201: RSQKPSRGGR YTV
101: VEPKWEDPEC ANGGKWTVIS SRKANLDTMW LETCMALIGE QFDESQEICG VVASVRQRQD KLSLWTKTAS NEAVQVDIGK KWKEVIDYND KMVYSFHDDS
201: RSQKPSRGGR YTV
001: MATDDVNEPL PAAAELPATE AEKQPHKLER KWSFWFDNQS KKGAAWGASL RKAYTFDTVE DFWGLHETIF QTSKLTANAE IHLFKAGVEP KWEDPECANG
101: GKWTWVVTAN RKEALDKGWL ETLMALIGEQ FDEADEICGV VASVRPQSKQ DKLSLWTRTK SNEAVLMGIG KKWKEILDVT DKITFNNHDD SRRSRFTV
101: GKWTWVVTAN RKEALDKGWL ETLMALIGEQ FDEADEICGV VASVRPQSKQ DKLSLWTRTK SNEAVLMGIG KKWKEILDVT DKITFNNHDD SRRSRFTV
Arabidopsis Description
EIF(ISO)4ELSP1 [Source:UniProtKB/TrEMBL;Acc:A0A178UEE3]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.