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Wheat
Subcellular Localization
min:
: max

 
Winner_takes_all: plastid

Predictor Summary:
  • plastid 2
  • mitochondrion 2
  • cytosol 1
  • nucleus 1
PPI

Inferred distinct locusB in Crop

Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS5A01G550800.1 Wheat cytosol 92.15 99.44
TraesCSU01G127100.1 Wheat cytosol 91.62 98.87
Os03t0109600-01 Rice plasma membrane 85.34 93.14
EER93008 Sorghum cytosol 78.53 89.82
Zm00001d027318_P001 Maize extracellular, mitochondrion, plastid 76.96 86.98
Zm00001d048526_P001 Maize extracellular 72.25 84.66
TraesCS1B01G175700.1 Wheat mitochondrion 77.49 84.57
HORVU4Hr1G090110.2 Barley plastid 90.58 82.38
VIT_17s0053g00620.t01 Wine grape cytosol, mitochondrion, nucleus, plastid 68.59 81.88
PGSC0003DMT400022830 Potato cytosol 64.4 79.87
Solyc07g008720.2.1 Tomato nucleus 67.54 79.63
Solyc09g010330.2.1 Tomato nucleus 67.02 79.01
PGSC0003DMT400073918 Potato cytosol 63.35 78.57
KRH29395 Soybean cytosol 66.49 78.4
KRH24412 Soybean endoplasmic reticulum 65.97 78.26
KRH75358 Soybean endoplasmic reticulum 64.92 77.99
KRH29394 Soybean cytosol, mitochondrion, nucleus, plastid 65.97 77.78
Bra008086.1-P Field mustard mitochondrion 67.54 77.25
AT1G73230.1 Thale cress mitochondrion 65.97 76.36
AT1G17880.1 Thale cress mitochondrion 65.97 76.36
Bra016010.1-P Field mustard cytosol, mitochondrion, nucleus, plastid 65.97 75.9
CDX96457 Canola cytosol, mitochondrion, nucleus, plastid 65.97 75.9
CDX68236 Canola cytosol, mitochondrion, nucleus, plastid 65.44 75.76
Bra003851.1-P Field mustard cytosol, mitochondrion, nucleus, plastid 64.92 75.61
CDY21729 Canola cytosol, mitochondrion, nucleus, plastid 61.26 75.0
Bra031007.1-P Field mustard cytosol, mitochondrion, nucleus, plastid 61.26 75.0
CDX72966 Canola cytosol, mitochondrion, nucleus, plastid 64.4 74.1
CDY26207 Canola cytosol, mitochondrion, nucleus, plastid 63.87 73.49
Bra025940.1-P Field mustard cytosol, mitochondrion, nucleus, plastid 63.87 73.49
CDX81852 Canola cytosol, mitochondrion, nucleus, plastid 62.3 73.01
CDX83885 Canola mitochondrion 61.78 71.52
CDY19183 Canola mitochondrion 64.92 70.06
GSMUA_Achr1P02000_001 Banana plastid 68.59 60.65
CDX82088 Canola mitochondrion 66.49 59.07
CDY11119 Canola mitochondrion 66.49 57.99
CDY65091 Canola mitochondrion 67.54 56.09
Solyc06g050640.1.1 Tomato mitochondrion 17.8 49.28
Bra016579.1-P Field mustard cytosol 63.35 35.91
CDX96745 Canola cytosol, golgi, mitochondrion, plastid 62.83 30.23
Protein Annotations
EnsemblPlants:TraesCS4B01G385900.2EnsemblPlantsGene:TraesCS4B01G385900Gene3D:2.20.70.30InterPro:IPR002715InterPro:IPR038187InterPro:NAC_A/B_dom_sf
InterPro:Nas_poly-pep-assoc_cplx_domPANTHER:PTHR10351PANTHER:PTHR10351:SF47PFAM:PF01849PFscan:PS51151SEG:seg
SMART:SM01407MapMan:19.1.2.1.2::::
Description
No Description!
Coordinates
chr4B:-:664762713..664764452
Molecular Weight (calculated)
20854.8 Da
IEP (calculated)
5.455
GRAVY (calculated)
-0.694
Length
191 amino acids
Sequence
(BLAST)
001: MQQLVCVVQM NVDKLKKMAG AVRTGGKGSV RRKKKAVHKT TTTDDKRLQS TLKRVGVNTI PGIEEVNIFK DDVVIQFQNP KVQASIAANT WVVSGTPQTK
101: KLQDLLPTII NQLGMSPCPD NLDNLRRLAE QFQKQMPGGE AGGASIGAAQ DDDDDVPELV PGETFEEAAE EKKEPEAKKE AEPEEKKESS S
Best Arabidopsis Sequence Match ( AT1G17880.1 )
(BLAST)
001: MNREKLMKMA NTVRTGGKGT VRRKKKAVHK TNTTDDKRLQ STLKRIGVNS IPAIEEVNIF KDDVVIQFIN PKVQASIAAN TWVVSGSPQT KKLQDILPQI
101: ISQLGPDNMD NLKKLAEQFQ KQASGEGNAA SATIQEEDDD DVPELVGETF ETAAEEKAPA AAASS
Arabidopsis Description
BTF3Basic transcription factor 3 [Source:UniProtKB/Swiss-Prot;Acc:Q9SMW7]
SUBAcon: [mitochondrion]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.