Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion, plastid, nucleus, cytosol
Predictor Summary:
Predictor Summary:
- nucleus 4
- cytosol 1
- mitochondrion 2
- plastid 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX96457 | Canola | cytosol, mitochondrion, nucleus, plastid | 100.0 | 100.0 |
| Bra003851.1-P | Field mustard | cytosol, mitochondrion, nucleus, plastid | 85.54 | 86.59 |
| Bra008086.1-P | Field mustard | mitochondrion | 84.94 | 84.43 |
| AT1G73230.1 | Thale cress | mitochondrion | 83.73 | 84.24 |
| Bra025940.1-P | Field mustard | cytosol, mitochondrion, nucleus, plastid | 81.33 | 81.33 |
| KRH24412 | Soybean | endoplasmic reticulum | 78.31 | 80.75 |
| KRH29394 | Soybean | cytosol, mitochondrion, nucleus, plastid | 78.31 | 80.25 |
| KRH29395 | Soybean | cytosol | 77.71 | 79.63 |
| GSMUA_Achr6P08310_001 | Banana | cytosol | 75.3 | 79.11 |
| Bra031007.1-P | Field mustard | cytosol, mitochondrion, nucleus, plastid | 74.1 | 78.85 |
| Solyc07g008720.2.1 | Tomato | nucleus | 76.51 | 78.4 |
| KRH75358 | Soybean | endoplasmic reticulum | 74.7 | 77.99 |
| PGSC0003DMT400073918 | Potato | cytosol | 72.29 | 77.92 |
| PGSC0003DMT400022830 | Potato | cytosol | 72.29 | 77.92 |
| Solyc09g010330.2.1 | Tomato | nucleus | 75.3 | 77.16 |
| VIT_17s0053g00620.t01 | Wine grape | cytosol, mitochondrion, nucleus, plastid | 72.89 | 75.62 |
| Zm00001d013999_P001 | Maize | plastid | 74.1 | 74.55 |
| Zm00001d032668_P001 | Maize | plastid | 73.49 | 73.94 |
| EER91468 | Sorghum | cytosol | 73.49 | 73.49 |
| TraesCS1D01G156700.1 | Wheat | cytosol | 73.49 | 73.05 |
| GSMUA_Achr3P18580_001 | Banana | cytosol | 69.28 | 72.78 |
| Zm00001d048526_P001 | Maize | extracellular | 69.88 | 71.17 |
| TraesCS1A01G159300.1 | Wheat | cytosol, nucleus, plastid | 74.7 | 70.86 |
| TraesCS1B01G175700.1 | Wheat | mitochondrion | 74.7 | 70.86 |
| TraesCS5A01G550800.1 | Wheat | cytosol | 75.3 | 70.62 |
| TraesCSU01G127100.1 | Wheat | cytosol | 75.3 | 70.62 |
| EER93008 | Sorghum | cytosol | 69.88 | 69.46 |
| Os03t0109600-01 | Rice | plasma membrane | 72.89 | 69.14 |
| Zm00001d027318_P001 | Maize | extracellular, mitochondrion, plastid | 69.88 | 68.64 |
| TraesCS4B01G385900.2 | Wheat | plastid | 75.9 | 65.97 |
| GSMUA_Achr6P16240_001 | Banana | golgi, vacuole | 72.89 | 64.71 |
| GSMUA_AchrUn_... | Banana | plastid | 72.89 | 62.69 |
| HORVU4Hr1G090110.2 | Barley | plastid | 75.9 | 60.0 |
| GSMUA_Achr10P... | Banana | plastid | 71.69 | 58.05 |
| Solyc06g050640.1.1 | Tomato | mitochondrion | 22.89 | 55.07 |
| HORVU1Hr1G042270.1 | Barley | nucleus, peroxisome, plastid | 74.7 | 45.93 |
| Bra016579.1-P | Field mustard | cytosol | 78.31 | 38.58 |
Protein Annotations
| MapMan:19.1.2.1.2 | Gene3D:2.20.70.30 | EnsemblPlantsGene:Bra016010 | EnsemblPlants:Bra016010.1 | EnsemblPlants:Bra016010.1-P | GO:GO:0006139 |
| GO:GO:0006351 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 |
| InterPro:IPR002715 | InterPro:IPR038187 | UniProt:M4DHN3 | InterPro:NAC_A/B_dom_sf | InterPro:Nas_poly-pep-assoc_cplx_dom | PFAM:PF01849 |
| PFscan:PS51151 | PANTHER:PTHR10351 | PANTHER:PTHR10351:SF47 | SMART:SM01407 | UniParc:UPI0002541CC3 | SEG:seg |
Description
AT1G73230 (E=2e-060) | nascent polypeptide-associated complex (NAC) domain-containing protein
Coordinates
chrA07:-:19854952..19855790
Molecular Weight (calculated)
18096.5 Da
IEP (calculated)
7.541
GRAVY (calculated)
-0.640
Length
166 amino acids
Sequence
(BLAST)
(BLAST)
001: MNREKLMKMA NTVRTGGKGT VRRKKKAVHK TNTTDDKKLQ STLKRVGVNS IPGIEEVNIF KDDVVIQFIN PKVQASIAAN TWAVSGTPQT KKLQDILPQI
101: ISQLGTDNLE NLKKLAEQFQ KQTPGGADIP ATIQEEDDDD VPELVGGETF ETPATEEAAQ PKATAS
101: ISQLGTDNLE NLKKLAEQFQ KQTPGGADIP ATIQEEDDDD VPELVGGETF ETPATEEAAQ PKATAS
001: MNREKLMKMA NTVRTGGKGT VRRKKKAVHK TTTTDDKRLQ STLKRVGVNS IPAIEEVNIF KDDVVIQFIN PKVQASIAAN TWVVSGTPQT KKLQDILPQI
101: ISQLGPDNLD NLKKLAEQFQ KQAPGAGDVP ATIQEEDDDD DVPDLVVGET FETPATEEAP KAAAS
101: ISQLGPDNLD NLKKLAEQFQ KQAPGAGDVP ATIQEEDDDD DVPDLVVGET FETPATEEAP KAAAS
Arabidopsis Description
Nascent polypeptide-associated complex subunit beta [Source:UniProtKB/Swiss-Prot;Acc:Q9CAT7]
SUBAcon: [mitochondrion]
SUBAcon: [mitochondrion]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.