Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 1
- mitochondrion 3
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX68236 | Canola | cytosol, mitochondrion, nucleus, plastid | 84.85 | 84.85 |
| Bra016010.1-P | Field mustard | cytosol, mitochondrion, nucleus, plastid | 84.24 | 83.73 |
| CDX96457 | Canola | cytosol, mitochondrion, nucleus, plastid | 84.24 | 83.73 |
| Bra008086.1-P | Field mustard | mitochondrion | 83.64 | 82.63 |
| AT1G17880.1 | Thale cress | mitochondrion | 82.42 | 82.42 |
| Bra003851.1-P | Field mustard | cytosol, mitochondrion, nucleus, plastid | 81.82 | 82.32 |
| Solyc07g008720.2.1 | Tomato | nucleus | 80.61 | 82.1 |
| KRH24412 | Soybean | endoplasmic reticulum | 80.0 | 81.99 |
| CDX72966 | Canola | cytosol, mitochondrion, nucleus, plastid | 82.42 | 81.93 |
| PGSC0003DMT400073918 | Potato | cytosol | 76.36 | 81.82 |
| KRH29394 | Soybean | cytosol, mitochondrion, nucleus, plastid | 80.0 | 81.48 |
| Solyc09g010330.2.1 | Tomato | nucleus | 80.0 | 81.48 |
| KRH29395 | Soybean | cytosol | 80.0 | 81.48 |
| VIT_17s0053g00620.t01 | Wine grape | cytosol, mitochondrion, nucleus, plastid | 78.79 | 81.25 |
| PGSC0003DMT400022830 | Potato | cytosol | 75.76 | 81.17 |
| GSMUA_Achr6P08310_001 | Banana | cytosol | 76.36 | 79.75 |
| KRH75358 | Soybean | endoplasmic reticulum | 75.76 | 78.62 |
| Zm00001d013999_P001 | Maize | plastid | 78.18 | 78.18 |
| Zm00001d032668_P001 | Maize | plastid | 77.58 | 77.58 |
| GSMUA_Achr3P18580_001 | Banana | cytosol | 73.94 | 77.22 |
| TraesCS1D01G156700.1 | Wheat | cytosol | 76.97 | 76.05 |
| EER91468 | Sorghum | cytosol | 75.76 | 75.3 |
| TraesCS1B01G175700.1 | Wheat | mitochondrion | 77.58 | 73.14 |
| TraesCS1A01G159300.1 | Wheat | cytosol, nucleus, plastid | 76.97 | 72.57 |
| Zm00001d048526_P001 | Maize | extracellular | 71.52 | 72.39 |
| EER93008 | Sorghum | cytosol | 72.73 | 71.86 |
| TraesCS5A01G550800.1 | Wheat | cytosol | 75.76 | 70.62 |
| TraesCSU01G127100.1 | Wheat | cytosol | 75.76 | 70.62 |
| Os03t0109600-01 | Rice | plasma membrane | 74.55 | 70.29 |
| Zm00001d027318_P001 | Maize | extracellular, mitochondrion, plastid | 70.91 | 69.23 |
| GSMUA_Achr6P16240_001 | Banana | golgi, vacuole | 75.15 | 66.31 |
| CDX82088 | Canola | mitochondrion | 86.06 | 66.05 |
| TraesCS4B01G385900.2 | Wheat | plastid | 76.36 | 65.97 |
| GSMUA_AchrUn_... | Banana | plastid | 76.36 | 65.28 |
| CDY11119 | Canola | mitochondrion | 84.85 | 63.93 |
| GSMUA_Achr10P... | Banana | plastid | 76.36 | 61.46 |
| CDY65091 | Canola | mitochondrion | 84.85 | 60.87 |
| HORVU4Hr1G090110.2 | Barley | plastid | 76.97 | 60.48 |
| Solyc06g050640.1.1 | Tomato | mitochondrion | 24.24 | 57.97 |
| HORVU1Hr1G042270.1 | Barley | nucleus, peroxisome, plastid | 77.58 | 47.41 |
Protein Annotations
| MapMan:19.1.2.1.2 | Gene3D:2.20.70.30 | EntrezGene:843657 | UniProt:A0A178WMJ1 | ProteinID:AAG52123.1 | ProteinID:AEE35432.1 |
| EMBL:AF370253 | EMBL:AK317769 | ArrayExpress:AT1G73230 | EnsemblPlantsGene:AT1G73230 | RefSeq:AT1G73230 | TAIR:AT1G73230 |
| RefSeq:AT1G73230-TAIR-G | EnsemblPlants:AT1G73230.1 | TAIR:AT1G73230.1 | EMBL:AY063069 | EMBL:AY084841 | Unigene:At.48369 |
| GO:GO:0003674 | GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 | GO:GO:0006950 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009628 | GO:GO:0009651 | GO:GO:0009987 | InterPro:IPR002715 |
| InterPro:IPR038187 | InterPro:NAC_A/B_dom_sf | RefSeq:NP_177466.1 | InterPro:Nas_poly-pep-assoc_cplx_dom | ProteinID:OAP19490.1 | PFAM:PF01849 |
| PO:PO:0000013 | PO:PO:0000037 | PO:PO:0000084 | PO:PO:0000230 | PO:PO:0000293 | PO:PO:0001017 |
| PO:PO:0001054 | PO:PO:0001078 | PO:PO:0001081 | PO:PO:0001170 | PO:PO:0001185 | PO:PO:0004507 |
| PO:PO:0007064 | PO:PO:0007095 | PO:PO:0007098 | PO:PO:0007103 | PO:PO:0007115 | PO:PO:0007123 |
| PO:PO:0007611 | PO:PO:0007616 | PO:PO:0008019 | PO:PO:0009005 | PO:PO:0009006 | PO:PO:0009009 |
| PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009029 | PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009032 |
| PO:PO:0009046 | PO:PO:0009047 | PO:PO:0009052 | PO:PO:0020030 | PO:PO:0020038 | PO:PO:0020100 |
| PO:PO:0020137 | PO:PO:0025022 | PO:PO:0025195 | PO:PO:0025281 | PFscan:PS51151 | PANTHER:PTHR10351 |
| PANTHER:PTHR10351:SF47 | UniProt:Q9CAT7 | SMART:SM01407 | UniParc:UPI000004B2D8 | SEG:seg | : |
Description
Nascent polypeptide-associated complex subunit beta [Source:UniProtKB/Swiss-Prot;Acc:Q9CAT7]
Coordinates
chr1:-:27540228..27541952
Molecular Weight (calculated)
18005.4 Da
IEP (calculated)
5.995
GRAVY (calculated)
-0.563
Length
165 amino acids
Sequence
(BLAST)
(BLAST)
001: MNREKLMKMA NTVRTGGKGT VRRKKKAVHK TTTTDDKRLQ STLKRVGVNS IPAIEEVNIF KDDVVIQFIN PKVQASIAAN TWVVSGTPQT KKLQDILPQI
101: ISQLGPDNLD NLKKLAEQFQ KQAPGAGDVP ATIQEEDDDD DVPDLVVGET FETPATEEAP KAAAS
101: ISQLGPDNLD NLKKLAEQFQ KQAPGAGDVP ATIQEEDDDD DVPDLVVGET FETPATEEAP KAAAS
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.