Factsheet for Bra003851.1-P

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, plastid, nucleus, cytosol

Predictor Summary:

nucleus 4
cytosol 1
mitochondrion 2
plastid 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX68236	Canola	cytosol, mitochondrion, nucleus, plastid	94.51	93.94
Bra016010.1-P	Field mustard	cytosol, mitochondrion, nucleus, plastid	86.59	85.54
Bra008086.1-P	Field mustard	mitochondrion	86.59	85.03
AT1G73230.1	Thale cress	mitochondrion	82.32	81.82
Bra031007.1-P	Field mustard	cytosol, mitochondrion, nucleus, plastid	76.83	80.77
Bra025940.1-P	Field mustard	cytosol, mitochondrion, nucleus, plastid	81.71	80.72
KRH24412	Soybean	endoplasmic reticulum	78.05	79.5
PGSC0003DMT400022830	Potato	cytosol	74.39	79.22
KRH29395	Soybean	cytosol	78.05	79.01
KRH29394	Soybean	cytosol, mitochondrion, nucleus, plastid	78.05	79.01
PGSC0003DMT400073918	Potato	cytosol	73.78	78.57
Solyc07g008720.2.1	Tomato	nucleus	77.44	78.4
VIT_17s0053g00620.t01	Wine grape	cytosol, mitochondrion, nucleus, plastid	76.22	78.12
Solyc09g010330.2.1	Tomato	nucleus	75.61	76.54
KRH75358	Soybean	endoplasmic reticulum	73.17	75.47
GSMUA_Achr6P08310_001	Banana	cytosol	72.56	75.32
Zm00001d013999_P001	Maize	plastid	74.39	73.94
Zm00001d032668_P001	Maize	plastid	73.78	73.33
TraesCS1D01G156700.1	Wheat	cytosol	73.17	71.86
EER91468	Sorghum	cytosol	72.56	71.69
GSMUA_Achr3P18580_001	Banana	cytosol	68.9	71.52
Zm00001d048526_P001	Maize	extracellular	70.12	70.55
EER93008	Sorghum	cytosol	71.34	70.06
TraesCS5A01G550800.1	Wheat	cytosol	75.0	69.49
TraesCSU01G127100.1	Wheat	cytosol	75.0	69.49
TraesCS1A01G159300.1	Wheat	cytosol, nucleus, plastid	73.78	69.14
TraesCS1B01G175700.1	Wheat	mitochondrion	73.78	69.14
Zm00001d027318_P001	Maize	extracellular, mitochondrion, plastid	70.12	68.05
Os03t0109600-01	Rice	plasma membrane	72.56	68.0
TraesCS4B01G385900.2	Wheat	plastid	75.61	64.92
GSMUA_Achr6P16240_001	Banana	golgi, vacuole	71.95	63.1
GSMUA_AchrUn_...	Banana	plastid	71.95	61.14
HORVU4Hr1G090110.2	Barley	plastid	74.39	58.1
GSMUA_Achr10P...	Banana	plastid	71.95	57.56
Solyc06g050640.1.1	Tomato	mitochondrion	21.34	50.72
HORVU1Hr1G042270.1	Barley	nucleus, peroxisome, plastid	73.78	44.81
Bra016579.1-P	Field mustard	cytosol	78.66	38.28

Protein Annotations

MapMan:19.1.2.1.2	Gene3D:2.20.70.30	EnsemblPlantsGene:Bra003851	EnsemblPlants:Bra003851.1	EnsemblPlants:Bra003851.1-P	GO:GO:0006139
GO:GO:0006351	GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987
InterPro:IPR002715	InterPro:IPR038187	UniProt:M4CI18	InterPro:NAC_A/B_dom_sf	InterPro:Nas_poly-pep-assoc_cplx_dom	PFAM:PF01849
PFscan:PS51151	PANTHER:PTHR10351	PANTHER:PTHR10351:SF47	SMART:SM01407	UniParc:UPI0002541732	SEG:seg

Description

AT1G73230 (E=7e-064) | nascent polypeptide-associated complex (NAC) domain-containing protein

Coordinates

chrA07:+:15363207..15364030

Molecular Weight (calculated)

17736.1 Da

IEP (calculated)

9.005

GRAVY (calculated)

-0.559

Length

164 amino acids

Sequence
(BLAST)

001: MNREKLMKMA NTVRTGGKGT VRRKKKAVHK TNTTDDKKLQ STLKRVGVNS IPGIEEVNIF KDDVVIQFIN PKVQASVAAN TWAVSGAPQT KKLQDILPQI
101: ISQLGTDNLD NLKKLAEQFQ KQAPGGGADV PATIQEEDED DVPELVAGET FETPAAQEAA KATA

Best Arabidopsis Sequence Match ( AT1G73230.1 )
(BLAST)

001: MNREKLMKMA NTVRTGGKGT VRRKKKAVHK TTTTDDKRLQ STLKRVGVNS IPAIEEVNIF KDDVVIQFIN PKVQASIAAN TWVVSGTPQT KKLQDILPQI
101: ISQLGPDNLD NLKKLAEQFQ KQAPGAGDVP ATIQEEDDDD DVPDLVVGET FETPATEEAP KAAAS

Arabidopsis Description

Nascent polypeptide-associated complex subunit beta [Source:UniProtKB/Swiss-Prot;Acc:Q9CAT7]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.