Factsheet for Bra008086.1-P

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

nucleus 4
cytosol 1
mitochondrion 3

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra003851.1-P	Field mustard	cytosol, mitochondrion, nucleus, plastid	85.03	86.59
Bra016010.1-P	Field mustard	cytosol, mitochondrion, nucleus, plastid	84.43	84.94
AT1G73230.1	Thale cress	mitochondrion	82.63	83.64
Bra025940.1-P	Field mustard	cytosol, mitochondrion, nucleus, plastid	80.84	81.33
KRH29395	Soybean	cytosol	78.44	80.86
KRH24412	Soybean	endoplasmic reticulum	76.65	79.5
Bra031007.1-P	Field mustard	cytosol, mitochondrion, nucleus, plastid	74.25	79.49
KRH29394	Soybean	cytosol, mitochondrion, nucleus, plastid	76.65	79.01
KRH75358	Soybean	endoplasmic reticulum	74.85	78.62
PGSC0003DMT400073918	Potato	cytosol	72.46	78.57
PGSC0003DMT400022830	Potato	cytosol	72.46	78.57
GSMUA_Achr6P08310_001	Banana	cytosol	74.25	78.48
Solyc09g010330.2.1	Tomato	nucleus	76.05	78.4
Solyc07g008720.2.1	Tomato	nucleus	76.05	78.4
VIT_17s0053g00620.t01	Wine grape	cytosol, mitochondrion, nucleus, plastid	74.25	77.5
Zm00001d013999_P001	Maize	plastid	74.85	75.76
Zm00001d032668_P001	Maize	plastid	74.25	75.15
TraesCS1D01G156700.1	Wheat	cytosol	74.25	74.25
GSMUA_Achr3P18580_001	Banana	cytosol	70.06	74.05
Zm00001d048526_P001	Maize	extracellular	71.86	73.62
EER91468	Sorghum	cytosol	73.05	73.49
TraesCS5A01G550800.1	Wheat	cytosol	76.65	72.32
TraesCSU01G127100.1	Wheat	cytosol	76.65	72.32
TraesCS1B01G175700.1	Wheat	mitochondrion	75.45	72.0
TraesCS1A01G159300.1	Wheat	cytosol, nucleus, plastid	75.45	72.0
EER93008	Sorghum	cytosol	71.86	71.86
Os03t0109600-01	Rice	plasma membrane	74.25	70.86
Zm00001d027318_P001	Maize	extracellular, mitochondrion, plastid	71.26	70.41
CDX82088	Canola	mitochondrion	89.82	69.77
TraesCS4B01G385900.2	Wheat	plastid	77.25	67.54
CDY65091	Canola	mitochondrion	91.62	66.52
GSMUA_Achr6P16240_001	Banana	golgi, vacuole	71.86	64.17
GSMUA_AchrUn_...	Banana	plastid	72.46	62.69
HORVU4Hr1G090110.2	Barley	plastid	76.65	60.95
GSMUA_Achr10P...	Banana	plastid	70.66	57.56
Solyc06g050640.1.1	Tomato	mitochondrion	22.75	55.07
HORVU1Hr1G042270.1	Barley	nucleus, peroxisome, plastid	76.05	47.04
Bra016579.1-P	Field mustard	cytosol	80.84	40.06

Protein Annotations

MapMan:19.1.2.1.2	Gene3D:2.20.70.30	EnsemblPlantsGene:Bra008086	EnsemblPlants:Bra008086.1	EnsemblPlants:Bra008086.1-P	GO:GO:0006139
GO:GO:0006351	GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987
InterPro:IPR002715	InterPro:IPR038187	UniProt:M4CV41	InterPro:NAC_A/B_dom_sf	InterPro:Nas_poly-pep-assoc_cplx_dom	PFAM:PF01849
PFscan:PS51151	PANTHER:PTHR10351	PANTHER:PTHR10351:SF47	SMART:SM01407	UniParc:UPI00025455A1	SEG:seg

Description

AT1G73230 (E=2e-059) | nascent polypeptide-associated complex (NAC) domain-containing protein

Coordinates

chrA02:+:13055290..13056143

Molecular Weight (calculated)

18147.6 Da

IEP (calculated)

6.000

GRAVY (calculated)

-0.608

Length

167 amino acids

Sequence
(BLAST)

001: MNREKLMKMA NTVRTGGKGT VRRKKKAVHK TNTTDDKKLQ STLKRVGVNS IPGIEEVNIF KDDVVIQFIN PKVQASIAAN TWAVSGTPQT KKLQDILPQI
101: ISQLGPDNLD NLKKLAEQFQ KQSPGGADVP ATIQEEDDDD DVPELVVGET FETPAAEEAA QPKAAAS

Best Arabidopsis Sequence Match ( AT1G73230.1 )
(BLAST)

001: MNREKLMKMA NTVRTGGKGT VRRKKKAVHK TTTTDDKRLQ STLKRVGVNS IPAIEEVNIF KDDVVIQFIN PKVQASIAAN TWVVSGTPQT KKLQDILPQI
101: ISQLGPDNLD NLKKLAEQFQ KQAPGAGDVP ATIQEEDDDD DVPDLVVGET FETPATEEAP KAAAS

Arabidopsis Description

Nascent polypeptide-associated complex subunit beta [Source:UniProtKB/Swiss-Prot;Acc:Q9CAT7]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.