Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion
Predictor Summary:
Predictor Summary:
- nucleus 2
- plastid 2
- golgi 1
- mitochondrion 3
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra008086.1-P | Field mustard | mitochondrion | 66.52 | 91.62 |
| CDX68236 | Canola | cytosol, mitochondrion, nucleus, plastid | 62.17 | 86.67 |
| CDX72966 | Canola | cytosol, mitochondrion, nucleus, plastid | 61.3 | 84.94 |
| AT1G73230.1 | Thale cress | mitochondrion | 60.87 | 84.85 |
| CDX96457 | Canola | cytosol, mitochondrion, nucleus, plastid | 60.43 | 83.73 |
| CDY26207 | Canola | cytosol, mitochondrion, nucleus, plastid | 58.26 | 80.72 |
| PGSC0003DMT400022830 | Potato | cytosol | 53.91 | 80.52 |
| PGSC0003DMT400073918 | Potato | cytosol | 53.91 | 80.52 |
| CDX82088 | Canola | mitochondrion | 75.22 | 80.47 |
| Solyc07g008720.2.1 | Tomato | nucleus | 56.52 | 80.25 |
| KRH24412 | Soybean | endoplasmic reticulum | 56.09 | 80.12 |
| KRH29395 | Soybean | cytosol | 56.09 | 79.63 |
| KRH29394 | Soybean | cytosol, mitochondrion, nucleus, plastid | 56.09 | 79.63 |
| Solyc09g010330.2.1 | Tomato | nucleus | 56.09 | 79.63 |
| CDX81852 | Canola | cytosol, mitochondrion, nucleus, plastid | 56.09 | 79.14 |
| CDX83885 | Canola | mitochondrion | 56.52 | 78.79 |
| CDY21729 | Canola | cytosol, mitochondrion, nucleus, plastid | 53.04 | 78.21 |
| VIT_17s0053g00620.t01 | Wine grape | cytosol, mitochondrion, nucleus, plastid | 54.35 | 78.12 |
| Zm00001d013999_P001 | Maize | plastid | 55.65 | 77.58 |
| KRH75358 | Soybean | endoplasmic reticulum | 53.48 | 77.36 |
| Zm00001d032668_P001 | Maize | plastid | 55.22 | 76.97 |
| GSMUA_Achr6P08310_001 | Banana | cytosol | 52.61 | 76.58 |
| TraesCS1D01G156700.1 | Wheat | cytosol | 55.22 | 76.05 |
| GSMUA_Achr3P18580_001 | Banana | cytosol | 51.74 | 75.32 |
| EER91468 | Sorghum | cytosol | 54.35 | 75.3 |
| CDY19183 | Canola | mitochondrion | 57.83 | 75.14 |
| TraesCS1B01G175700.1 | Wheat | mitochondrion | 56.09 | 73.71 |
| Zm00001d048526_P001 | Maize | extracellular | 52.17 | 73.62 |
| TraesCS1A01G159300.1 | Wheat | cytosol, nucleus, plastid | 55.65 | 73.14 |
| EER93008 | Sorghum | cytosol | 53.04 | 73.05 |
| TraesCS5A01G550800.1 | Wheat | cytosol | 55.65 | 72.32 |
| TraesCSU01G127100.1 | Wheat | cytosol | 55.65 | 72.32 |
| Os03t0109600-01 | Rice | plasma membrane | 54.78 | 72.0 |
| Zm00001d027318_P001 | Maize | extracellular, mitochondrion, plastid | 52.17 | 71.01 |
| CDY11119 | Canola | mitochondrion | 65.22 | 68.49 |
| TraesCS4B01G385900.2 | Wheat | plastid | 56.09 | 67.54 |
| GSMUA_AchrUn_... | Banana | plastid | 55.22 | 65.8 |
| GSMUA_Achr6P16240_001 | Banana | golgi, vacuole | 53.04 | 65.24 |
| HORVU4Hr1G090110.2 | Barley | plastid | 56.09 | 61.43 |
| GSMUA_Achr10P... | Banana | plastid | 53.91 | 60.49 |
| Solyc06g050640.1.1 | Tomato | mitochondrion | 16.52 | 55.07 |
| HORVU1Hr1G042270.1 | Barley | nucleus, peroxisome, plastid | 57.39 | 48.89 |
| CDX96745 | Canola | cytosol, golgi, mitochondrion, plastid | 57.83 | 33.5 |
Protein Annotations
| MapMan:19.1.2.1.2 | Gene3D:2.20.70.30 | GO:A0A078JHB7 | UniProt:A0A078JHB7 | EnsemblPlants:CDY65091 | ProteinID:CDY65091 |
| ProteinID:CDY65091.1 | GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0009058 | GO:GO:0009987 | EnsemblPlantsGene:GSBRNA2T00044153001 | InterPro:IPR002715 | InterPro:IPR038187 | InterPro:NAC_A/B_dom_sf |
| InterPro:Nas_poly-pep-assoc_cplx_dom | PFAM:PF01849 | PFscan:PS51151 | PANTHER:PTHR10351 | PANTHER:PTHR10351:SF47 | SMART:SM01407 |
| UniParc:UPI0004EF2120 | SEG:seg | : | : | : | : |
Description
BnaAnng20100DNascent polypeptide-associated complex subunit beta [Source:UniProtKB/TrEMBL;Acc:A0A078JHB7]
Coordinates
chrLK034653:+:16748..18551
Molecular Weight (calculated)
25091.0 Da
IEP (calculated)
9.423
GRAVY (calculated)
-0.465
Length
230 amino acids
Sequence
(BLAST)
(BLAST)
001: MGHRVRPMVQ ISISRPIAIS NGEIGQGIAK PSIAVWICLS ILLSSSSSYT LWTKEEPYKS NNKMNREKLM KMANTVRTGG KGTVRRKKKA VHKTNTTDDK
101: KLQSTLKRVG VNSIPGIEEV NIFKDDVVIQ FINPKVQASI AANTWAVSGT PQTKKLQDIL PQIISQLGPD NLDNLKKLAE QFQKQSPGGA DVPATIQEED
201: DDDDVPELVV GETFETPAAE EASQPKAAAS
101: KLQSTLKRVG VNSIPGIEEV NIFKDDVVIQ FINPKVQASI AANTWAVSGT PQTKKLQDIL PQIISQLGPD NLDNLKKLAE QFQKQSPGGA DVPATIQEED
201: DDDDVPELVV GETFETPAAE EASQPKAAAS
001: MNREKLMKMA NTVRTGGKGT VRRKKKAVHK TTTTDDKRLQ STLKRVGVNS IPAIEEVNIF KDDVVIQFIN PKVQASIAAN TWVVSGTPQT KKLQDILPQI
101: ISQLGPDNLD NLKKLAEQFQ KQAPGAGDVP ATIQEEDDDD DVPDLVVGET FETPATEEAP KAAAS
101: ISQLGPDNLD NLKKLAEQFQ KQAPGAGDVP ATIQEEDDDD DVPDLVVGET FETPATEEAP KAAAS
Arabidopsis Description
Nascent polypeptide-associated complex subunit beta [Source:UniProtKB/Swiss-Prot;Acc:Q9CAT7]
SUBAcon: [mitochondrion]
SUBAcon: [mitochondrion]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.