Factsheet for TraesCS3A01G521500.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3D01G527800.1	Wheat	cytosol, golgi	100.0	100.0
TraesCS3B01G591300.1	Wheat	cytosol	99.07	99.07
HORVU3Hr1G113940.2	Barley	cytosol	93.49	93.49
Zm00001d041682_P001	Maize	cytosol, extracellular	74.42	73.39
EES02138	Sorghum	cytosol	74.42	72.73
Zm00001d041973_P001	Maize	cytosol	73.95	72.27
Os01t0970400-01	Rice	cytosol	74.42	70.48
CDX90426	Canola	cytosol	29.77	69.57
Bra012622.1-P	Field mustard	cytosol	42.33	69.47
CDY01513	Canola	extracellular	29.77	67.37
GSMUA_Achr3P02580_001	Banana	cytosol	68.37	64.19
Solyc02g021550.2.1	Tomato	cytosol	51.63	60.0
KRH21134	Soybean	cytosol	64.65	58.65
PGSC0003DMT400034911	Potato	cytosol	62.79	58.44
VIT_10s0003g02250.t01	Wine grape	cytosol	62.33	56.78
CDY61674	Canola	cytosol	59.53	56.14
AT4G18040.1	Thale cress	cytosol	60.0	54.89
Bra013283.1-P	Field mustard	cytosol	58.14	54.82
GSMUA_Achr4P12820_001	Banana	cytosol	62.33	54.47
CDX78824	Canola	cytosol	57.21	53.95
Bra021026.1-P	Field mustard	cytosol	58.14	53.42
CDY08883	Canola	cytosol	57.67	52.99
CDX76547	Canola	cytosol	57.67	52.99
KRH11115	Soybean	cytosol	54.42	50.0
AT1G29590.1	Thale cress	cytosol	53.02	47.5
AT1G29550.1	Thale cress	cytosol	52.56	47.08
TraesCS1A01G149200.1	Wheat	cytosol	44.19	44.6
CDY44305	Canola	cytosol	49.77	43.85
CDX99836	Canola	cytosol	50.23	43.55
Bra030147.1-P	Field mustard	cytosol	49.3	43.44
CDX94676	Canola	cytosol	49.3	43.09
Bra032325.1-P	Field mustard	cytosol	47.91	41.53
CDY48345	Canola	cytosol	46.98	40.73
TraesCS4A01G087900.1	Wheat	cytosol	26.98	25.0

Protein Annotations

MapMan:17.4.2.3.1	Gene3D:3.30.760.10	GO:GO:0003674	GO:GO:0003676	GO:GO:0003723	GO:GO:0003743
GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0006412
GO:GO:0006413	GO:GO:0008135	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987
GO:GO:0019538	InterPro:IPR023398	PFAM:PF01652	ScanProsite:PS00813	PANTHER:PTHR11960	PANTHER:PTHR11960:SF12
SUPFAM:SSF55418	InterPro:TIF_eIF4e-like	InterPro:TIF_eIF_4E	InterPro:TIF_eIF_4E_CS	EnsemblPlantsGene:TraesCS3A01G521500	EnsemblPlants:TraesCS3A01G521500.1
SEG:seg	:	:	:	:	:

Description

No Description!

Coordinates

chr3A:+:738129573..738132640

Molecular Weight (calculated)

23991.8 Da

IEP (calculated)

5.343

GRAVY (calculated)

-0.612

Length

215 amino acids

Sequence
(BLAST)

001: MAEDTETRPA SAGAEEREEG EIADDGDGSS AAAAGRITAH PLENAWTFWF DNPQGKSRQV AWGSTIHPIH TFSTVEDFWG LYNNIHNPSK LNVGADFHCF
101: KNKIEPKWED PICANGGKWT ISCGRGKSDT FWLHTLLAMI GEQFDFGDEI CGAVVSVRQK QERVAIWTKN AANEAAQISI GKQWKEFLDY KDSIGFIVHE
201: DAKRSDKGPK NRYTV

Best Arabidopsis Sequence Match ( AT4G18040.1 )
(BLAST)

001: MAVEDTPKSV VTEEAKPNSI ENPIDRYHEE GDDAEEGEIA GGEGDGNVDE SSKSGVPESH PLEHSWTFWF DNPAVKSKQT SWGSSLRPVF TFSTVEEFWS
101: LYNNMKHPSK LAHGADFYCF KHIIEPKWED PICANGGKWT MTFPKEKSDK SWLYTLLALI GEQFDHGDEI CGAVVNIRGK QERISIWTKN ASNEAAQVSI
201: GKQWKEFLDY NNSIGFIIHE DAKKLDRNAK NAYTA

Arabidopsis Description

EIF4E1eIF4E1 [Source:UniProtKB/TrEMBL;Acc:A0A178UXU3]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.