CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra032325.1-P	Field mustard	cytosol	96.77	96.77
CDX99836	Canola	cytosol	92.74	92.74
CDX94676	Canola	cytosol	77.02	77.64
CDY44305	Canola	cytosol	76.21	77.46
AT1G29590.1	Thale cress	cytosol	71.37	73.75
AT1G29550.1	Thale cress	cytosol	70.97	73.33
CDY01513	Canola	extracellular	22.58	58.95
CDX90426	Canola	cytosol	20.97	56.52
CDY61674	Canola	cytosol	48.39	52.63
CDX76547	Canola	cytosol	49.6	52.56
CDX78824	Canola	cytosol	47.58	51.75
KRH21134	Soybean	cytosol	48.79	51.05
VIT_10s0003g02250.t01	Wine grape	cytosol	48.39	50.85
CDY08883	Canola	cytosol	47.58	50.43
Solyc03g005870.2.1	Tomato	cytosol, nucleus	45.97	49.35
Solyc02g021550.2.1	Tomato	cytosol	36.69	49.19
PGSC0003DMT400034911	Potato	cytosol	45.56	48.92
GSMUA_Achr3P02580_001	Banana	cytosol	44.76	48.47
Zm00001d041682_P001	Maize	cytosol, extracellular	42.34	48.17
EES02138	Sorghum	cytosol	42.34	47.73
HORVU3Hr1G113940.2	Barley	cytosol	41.13	47.44
TraesCS3A01G521500.1	Wheat	cytosol	40.73	46.98
TraesCS3B01G591300.1	Wheat	cytosol	40.73	46.98
TraesCS3D01G527800.1	Wheat	cytosol, golgi	40.73	46.98
Zm00001d041973_P001	Maize	cytosol	41.13	46.36
Os01t0970400-01	Rice	cytosol	41.94	45.81
GSMUA_Achr4P12820_001	Banana	cytosol	42.74	43.09
KRH11115	Soybean	cytosol	39.92	42.31
CDY49364	Canola	cytosol	31.45	39.0
CDY38545	Canola	cytosol	31.05	38.89
CDY33686	Canola	cytosol	31.05	38.69
CDY06456	Canola	cytosol	30.24	38.66
CDX84118	Canola	cytosol	31.05	38.5
CDX74645	Canola	cytosol	30.65	33.33
CDY38487	Canola	cytosol	20.56	23.83
CDY53257	Canola	cytosol	21.37	23.66
CDY49143	Canola	cytosol	21.37	23.66
CDY45630	Canola	cytosol	21.37	23.66
CDY02645	Canola	cytosol	21.37	23.66
CDX70795	Canola	cytosol	20.56	23.39
CDX78777	Canola	cytosol	19.76	22.48

Protein Annotations

MapMan:17.4.2.3.1	Gene3D:3.30.760.10	GO:A0A078IBT6	UniProt:A0A078IBT6	EnsemblPlants:CDY48345	ProteinID:CDY48345
ProteinID:CDY48345.1	GO:GO:0003674	GO:GO:0003676	GO:GO:0003723	GO:GO:0003743	GO:GO:0005488
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0006412	GO:GO:0006413
GO:GO:0008135	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0019538
EnsemblPlantsGene:GSBRNA2T00089318001	InterPro:IPR023398	PFAM:PF01652	ScanProsite:PS00813	PANTHER:PTHR11960	PANTHER:PTHR11960:SF12
SUPFAM:SSF55418	InterPro:TIF_eIF4e-like	InterPro:TIF_eIF_4E	InterPro:TIF_eIF_4E_CS	UniParc:UPI0004EF047E	:

Description

BnaA09g26760DBnaA09g26760D protein [Source:UniProtKB/TrEMBL;Acc:A0A078IBT6]

Coordinates

chrLK032766:+:124247..125582

Molecular Weight (calculated)

28177.1 Da

IEP (calculated)

7.251

GRAVY (calculated)

-0.578

Length

248 amino acids

Sequence
(BLAST)

001: MTVERSSVSA IMAEEENLDP NTANHCPIQK HLPAIKAIRG GEEGASKEQK ITCGGNGYVW KKSKSTTVIQ HSHSFQSSWT FWFDTPSSKS NQATWGSSLR
101: TLYTFATIEE FWSLYNNIHP PNKWVHGSDL YCFKHEIEPK WEDPVCANGG KWTMMFPKAT LESNWLNTLL SLVGEQFEHG EEICGTVLNF RTRGDKISIW
201: TKNAANKEAQ ISIGKQWKEL VGCNETIGFI FHEDAKTLDR NARPRYTV

Best Arabidopsis Sequence Match ( AT1G29590.1 )
(BLAST)

001: MVVMDSPVSG RMADQNIDPN TTTSPSPIEK HVSAIKAISG DEKAPSKEKK NYASKKSTTV IQKSHCFQNS WTFWFDNPSS KSNQVIWGSS LRSLYTFATI
101: EEFWSLYNNI HPPTKWVSGS DLYCFKDKIE PKWEDPICAN GGKWTMFFPR ATLESNWLNT LLALVGEQFD QGDEICGAVL NFRTRGDRIS LWTKKAANEE
201: AQLSIGKQWK ELLGYNDTIG FIVHEDAKTL DRDAKRRYTV

Arabidopsis Description

EIF4E2Eukaryotic translation initiation factor 4E-2 [Source:UniProtKB/Swiss-Prot;Acc:Q9C7P2]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.