Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| Solyc07g054630.2.1 | |
| Solyc08g068540.2.1 |
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT4G18040.1 | Solyc07g054630.2.1 | AT4G01580.1 | 21798944 |
| AT4G18040.1 | Solyc08g068540.2.1 | AT4G01580.1 | 21798944 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d041682_P001 | Maize | cytosol, extracellular | 63.78 | 54.13 |
| EES02138 | Sorghum | cytosol | 64.32 | 54.09 |
| GSMUA_Achr3P02580_001 | Banana | cytosol | 65.95 | 53.28 |
| Zm00001d041973_P001 | Maize | cytosol | 63.24 | 53.18 |
| VIT_10s0003g02250.t01 | Wine grape | cytosol | 67.03 | 52.54 |
| Os01t0970400-01 | Rice | cytosol | 64.32 | 52.42 |
| HORVU3Hr1G113940.2 | Barley | cytosol | 60.54 | 52.09 |
| KRH11115 | Soybean | cytosol | 65.41 | 51.71 |
| TraesCS3D01G527800.1 | Wheat | cytosol, golgi | 60.0 | 51.63 |
| TraesCS3B01G591300.1 | Wheat | cytosol | 60.0 | 51.63 |
| TraesCS3A01G521500.1 | Wheat | cytosol | 60.0 | 51.63 |
| Bra012622.1-P | Field mustard | cytosol | 36.22 | 51.15 |
| KRH21134 | Soybean | cytosol | 63.78 | 49.79 |
| Solyc03g005870.2.1 | Tomato | cytosol, nucleus | 61.62 | 49.35 |
| CDY61674 | Canola | cytosol | 59.46 | 48.25 |
| Bra013283.1-P | Field mustard | cytosol | 58.92 | 47.81 |
| CDX78824 | Canola | cytosol | 58.92 | 47.81 |
| Bra021026.1-P | Field mustard | cytosol | 60.0 | 47.44 |
| CDY08883 | Canola | cytosol | 59.46 | 47.01 |
| CDX76547 | Canola | cytosol | 59.46 | 47.01 |
| AT4G18040.1 | Thale cress | cytosol | 59.46 | 46.81 |
| GSMUA_Achr4P12820_001 | Banana | cytosol | 60.0 | 45.12 |
| CDY01513 | Canola | extracellular | 22.16 | 43.16 |
| Solyc09g090580.2.1 | Tomato | nucleus | 45.41 | 42.0 |
| CDX90426 | Canola | cytosol | 20.54 | 41.3 |
| AT1G29590.1 | Thale cress | cytosol | 51.89 | 40.0 |
| AT1G29550.1 | Thale cress | cytosol | 51.89 | 40.0 |
| Bra030147.1-P | Field mustard | cytosol | 51.35 | 38.93 |
| CDY44305 | Canola | cytosol | 51.35 | 38.93 |
| CDX99836 | Canola | cytosol | 51.89 | 38.71 |
| CDX94676 | Canola | cytosol | 51.35 | 38.62 |
| Bra032325.1-P | Field mustard | cytosol | 50.27 | 37.5 |
| CDY48345 | Canola | cytosol | 49.19 | 36.69 |
| Solyc10g080660.1.1 | Tomato | cytosol, nucleus | 30.27 | 25.11 |
Protein Annotations
| MapMan:17.4.2.3.1 | Gene3D:3.30.760.10 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003723 | GO:GO:0003743 |
| GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0006412 |
| GO:GO:0006413 | GO:GO:0008135 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 |
| GO:GO:0019538 | InterPro:IPR023398 | UniProt:K4B503 | PFAM:PF01652 | ScanProsite:PS00813 | PANTHER:PTHR11960 |
| PANTHER:PTHR11960:SF12 | SUPFAM:SSF55418 | EnsemblPlantsGene:Solyc02g021550.2 | EnsemblPlants:Solyc02g021550.2.1 | InterPro:TIF_eIF4e-like | InterPro:TIF_eIF_4E |
| InterPro:TIF_eIF_4E_CS | UniParc:UPI0002768828 | : | : | : | : |
Description
No Description!
Coordinates
chr2:-:23171946..23178376
Molecular Weight (calculated)
20847.1 Da
IEP (calculated)
4.796
GRAVY (calculated)
-0.566
Length
185 amino acids
Sequence
(BLAST)
(BLAST)
001: MADELNKAAL EEYKSSSVED RGEEGEIVGE SDDTASSLGK QITMKHPLEH SWTFWFDNPS GKSKQAAWGS SIRPIYTFST AEDFWSVYNN IHHPSKLAVG
101: ADFHCFKNKI EPKWEDPVCA NGGKWTMNFS RGKSDTCWLY TLLALIGEQF DYGDEICGAV INVRVRQEKI ALWTRNAANE TAQDV
101: ADFHCFKNKI EPKWEDPVCA NGGKWTMNFS RGKSDTCWLY TLLALIGEQF DYGDEICGAV INVRVRQEKI ALWTRNAANE TAQDV
001: MAVEDTPKSV VTEEAKPNSI ENPIDRYHEE GDDAEEGEIA GGEGDGNVDE SSKSGVPESH PLEHSWTFWF DNPAVKSKQT SWGSSLRPVF TFSTVEEFWS
101: LYNNMKHPSK LAHGADFYCF KHIIEPKWED PICANGGKWT MTFPKEKSDK SWLYTLLALI GEQFDHGDEI CGAVVNIRGK QERISIWTKN ASNEAAQVSI
201: GKQWKEFLDY NNSIGFIIHE DAKKLDRNAK NAYTA
101: LYNNMKHPSK LAHGADFYCF KHIIEPKWED PICANGGKWT MTFPKEKSDK SWLYTLLALI GEQFDHGDEI CGAVVNIRGK QERISIWTKN ASNEAAQVSI
201: GKQWKEFLDY NNSIGFIIHE DAKKLDRNAK NAYTA
Arabidopsis Description
EIF4E1eIF4E1 [Source:UniProtKB/TrEMBL;Acc:A0A178UXU3]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.