Factsheet for Bra032325.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 3
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY48345	Canola	cytosol	96.77	96.77
CDX99836	Canola	cytosol	92.74	92.74
Bra030147.1-P	Field mustard	cytosol	76.61	77.87
AT1G29590.1	Thale cress	cytosol	72.98	75.42
AT1G29550.1	Thale cress	cytosol	72.18	74.58
Bra012622.1-P	Field mustard	cytosol	33.87	64.12
Bra013283.1-P	Field mustard	cytosol	49.6	53.95
Bra021026.1-P	Field mustard	cytosol	49.6	52.56
KRH21134	Soybean	cytosol	49.6	51.9
VIT_10s0003g02250.t01	Wine grape	cytosol	49.19	51.69
Solyc03g005870.2.1	Tomato	cytosol, nucleus	47.18	50.65
Solyc02g021550.2.1	Tomato	cytosol	37.5	50.27
PGSC0003DMT400034911	Potato	cytosol	46.77	50.22
GSMUA_Achr3P02580_001	Banana	cytosol	45.56	49.34
Zm00001d041682_P001	Maize	cytosol, extracellular	43.15	49.08
EES02138	Sorghum	cytosol	42.74	48.18
HORVU3Hr1G113940.2	Barley	cytosol	41.53	47.91
TraesCS3A01G521500.1	Wheat	cytosol	41.53	47.91
TraesCS3B01G591300.1	Wheat	cytosol	41.53	47.91
TraesCS3D01G527800.1	Wheat	cytosol, golgi	41.53	47.91
Zm00001d041973_P001	Maize	cytosol	41.53	46.82
Os01t0970400-01	Rice	cytosol	42.34	46.26
GSMUA_Achr4P12820_001	Banana	cytosol	43.55	43.9
KRH11115	Soybean	cytosol	40.73	43.16
Bra039484.1-P	Field mustard	cytosol	31.45	39.39
Bra035393.1-P	Field mustard	cytosol	31.45	39.2
Bra035531.1-P	Field mustard	cytosol	31.45	39.0
Bra002134.1-P	Field mustard	cytosol	20.16	26.45
Bra006439.1-P	Field mustard	cytosol	21.37	24.31
Bra023664.1-P	Field mustard	cytosol	20.97	23.21

Protein Annotations

MapMan:17.4.2.3.1	Gene3D:3.30.760.10	EnsemblPlantsGene:Bra032325	EnsemblPlants:Bra032325.1	EnsemblPlants:Bra032325.1-P	GO:GO:0003674
GO:GO:0003676	GO:GO:0003723	GO:GO:0003743	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005737	GO:GO:0006412	GO:GO:0006413	GO:GO:0008135	GO:GO:0008150
GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0019538	InterPro:IPR023398	UniProt:M4EU43
PFAM:PF01652	ScanProsite:PS00813	PANTHER:PTHR11960	PANTHER:PTHR11960:SF12	SUPFAM:SSF55418	InterPro:TIF_eIF4e-like
InterPro:TIF_eIF_4E	InterPro:TIF_eIF_4E_CS	UniParc:UPI0002542644	:	:	:

Description

AT1G29590 (E=6e-106) | eukaryotic translation initiation factor 4E, putative / eIF-4E, putative / eIF4E, putative / mRNA cap-binding protein, putative

Coordinates

chrA09:-:22554483..22555752

Molecular Weight (calculated)

28163.9 Da

IEP (calculated)

6.596

GRAVY (calculated)

-0.612

Length

248 amino acids

Sequence
(BLAST)

001: MTVERSSVSA IMAEEENLDP NTANHCPIQK HLPAIKAIRG GEEGPSKEQK ITCGGNGYVW KKSKSTTVNQ HSHSFQSSWT FWFDTPSSKS NQTTWGSSLR
101: TLYTFATIEE FWSLYNNIHP PNKWVHGSDL YCFKHEIEPK WEDPVCANGG KWTMMFPTAT LESNWLNTLL SLVGEQFEHG DEICGAVLNF RTRGDKISIW
201: TKNAANEEAQ LSIGKQWKEL VGCNETIGFI FHEDAKTLDR NARPRYTV

Best Arabidopsis Sequence Match ( AT1G29590.1 )
(BLAST)

001: MVVMDSPVSG RMADQNIDPN TTTSPSPIEK HVSAIKAISG DEKAPSKEKK NYASKKSTTV IQKSHCFQNS WTFWFDNPSS KSNQVIWGSS LRSLYTFATI
101: EEFWSLYNNI HPPTKWVSGS DLYCFKDKIE PKWEDPICAN GGKWTMFFPR ATLESNWLNT LLALVGEQFD QGDEICGAVL NFRTRGDRIS LWTKKAANEE
201: AQLSIGKQWK ELLGYNDTIG FIVHEDAKTL DRDAKRRYTV

Arabidopsis Description

EIF4E2Eukaryotic translation initiation factor 4E-2 [Source:UniProtKB/Swiss-Prot;Acc:Q9C7P2]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.