Factsheet for HORVU3Hr1G113940.2

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol
MultiLoc:	cytosol
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3D01G527800.1	Wheat	cytosol, golgi	93.49	93.49
TraesCS3B01G591300.1	Wheat	cytosol	93.49	93.49
TraesCS3A01G521500.1	Wheat	cytosol	93.49	93.49
Zm00001d041682_P001	Maize	cytosol, extracellular	71.16	70.18
Zm00001d041973_P001	Maize	cytosol	71.16	69.55
Bra012622.1-P	Field mustard	cytosol	42.33	69.47
EES02138	Sorghum	cytosol	70.7	69.09
Os01t0970400-01	Rice	cytosol	72.56	68.72
CDX90426	Canola	cytosol	28.84	67.39
CDY01513	Canola	extracellular	29.77	67.37
GSMUA_Achr3P02580_001	Banana	cytosol	66.51	62.45
Solyc02g021550.2.1	Tomato	cytosol	52.09	60.54
PGSC0003DMT400034911	Potato	cytosol	62.79	58.44
KRH21134	Soybean	cytosol	63.72	57.81
VIT_10s0003g02250.t01	Wine grape	cytosol	62.33	56.78
CDY61674	Canola	cytosol	59.07	55.7
AT4G18040.1	Thale cress	cytosol	60.47	55.32
Bra013283.1-P	Field mustard	cytosol	57.67	54.39
CDX78824	Canola	cytosol	56.74	53.51
Bra021026.1-P	Field mustard	cytosol	58.14	53.42
CDY08883	Canola	cytosol	57.67	52.99
CDX76547	Canola	cytosol	57.67	52.99
GSMUA_Achr4P12820_001	Banana	cytosol	60.0	52.44
KRH11115	Soybean	cytosol	53.49	49.15
AT1G29550.1	Thale cress	cytosol	53.95	48.33
AT1G29590.1	Thale cress	cytosol	53.49	47.92
HORVU1Hr1G039260.2	Barley	cytosol	44.65	45.71
CDY44305	Canola	cytosol	50.7	44.67
CDX99836	Canola	cytosol	50.7	43.95
CDX94676	Canola	cytosol	50.23	43.9
Bra030147.1-P	Field mustard	cytosol	49.77	43.85
Bra032325.1-P	Field mustard	cytosol	47.91	41.53
CDY48345	Canola	cytosol	47.44	41.13
HORVU4Hr1G061500.4	Barley	cytosol	27.91	25.86
HORVU2Hr1G094490.1	Barley	plastid	17.67	23.17

Protein Annotations

MapMan:17.4.2.3.1	Gene3D:3.30.760.10	ProteinID:AAV80393.1	GO:GO:0003674	GO:GO:0003676	GO:GO:0003723
GO:GO:0003743	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737
GO:GO:0006412	GO:GO:0006413	GO:GO:0008135	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058
GO:GO:0009987	GO:GO:0019538	EnsemblPlantsGene:HORVU3Hr1G113940	EnsemblPlants:HORVU3Hr1G113940.2	InterPro:IPR023398	PFAM:PF01652
ScanProsite:PS00813	PANTHER:PTHR11960	PANTHER:PTHR11960:SF12	UniProt:Q4QXS7	SUPFAM:SSF55418	InterPro:TIF_eIF4e-like
InterPro:TIF_eIF_4E	InterPro:TIF_eIF_4E_CS	UniParc:UPI000050BDAD	SEG:seg	:	:

Description

eIF4E [Source:UniProtKB/TrEMBL;Acc:Q4QXS7]

Coordinates

chrchr3H:+:689854512..689861683

Molecular Weight (calculated)

23874.5 Da

IEP (calculated)

5.336

GRAVY (calculated)

-0.563

Length

215 amino acids

Sequence
(BLAST)

001: MAEDTETRPA SAGAEEREEG EIADDGDGSA AAAAGRVSAH PLENAWTFWF DNPQGKSRAV AWGSTIHPIH TFSTVEDFWS LYNNIHHPSK LNVGADFHCF
101: KDKIEPKWED PICANGGKWT ISCGKGKSDT FWLHTLLALI GEQFDFGDEI CGAVVSVRKN QERVAIWTKN AANETAQISI GKQWKEFLDY KDSIGFVVHE
201: DAKRSDKGAK NRYTV

Best Arabidopsis Sequence Match ( AT4G18040.1 )
(BLAST)

001: MAVEDTPKSV VTEEAKPNSI ENPIDRYHEE GDDAEEGEIA GGEGDGNVDE SSKSGVPESH PLEHSWTFWF DNPAVKSKQT SWGSSLRPVF TFSTVEEFWS
101: LYNNMKHPSK LAHGADFYCF KHIIEPKWED PICANGGKWT MTFPKEKSDK SWLYTLLALI GEQFDHGDEI CGAVVNIRGK QERISIWTKN ASNEAAQVSI
201: GKQWKEFLDY NNSIGFIIHE DAKKLDRNAK NAYTA

Arabidopsis Description

EIF4E1eIF4E1 [Source:UniProtKB/TrEMBL;Acc:A0A178UXU3]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.