Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- cytosol 1
- mitochondrion 1
- nucleus 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS3B01G250000.3 | Wheat | nucleus | 55.62 | 41.35 |
| TraesCS3D01G233000.2 | Wheat | nucleus | 55.93 | 40.2 |
| KRH50040 | Soybean | cytosol | 2.93 | 14.84 |
| GSMUA_Achr7P24410_001 | Banana | mitochondrion | 2.0 | 14.29 |
| Bra020902.1-P | Field mustard | cytosol | 2.62 | 12.14 |
| TraesCS1A01G279500.3 | Wheat | plastid | 2.62 | 11.64 |
| TraesCS5A01G048900.1 | Wheat | cytosol, mitochondrion | 3.24 | 10.66 |
| VIT_00s0181g00230.t01 | Wine grape | cytosol | 2.16 | 9.93 |
| KXG32887 | Sorghum | nucleus | 12.94 | 9.48 |
| TraesCS5A01G376200.1 | Wheat | mitochondrion | 2.62 | 9.44 |
| Solyc02g078270.2.1 | Tomato | nucleus | 5.08 | 8.73 |
| AT4G21610.1 | Thale cress | cytosol, nucleus, plastid | 1.85 | 7.74 |
| PGSC0003DMT400076422 | Potato | nucleus | 4.62 | 7.67 |
| TraesCS7A01G310500.1 | Wheat | cytosol | 1.54 | 7.58 |
| CDX76435 | Canola | cytosol | 1.69 | 7.14 |
| Zm00001d044463_P001 | Maize | nucleus | 9.4 | 6.88 |
| Os01t0612700-01 | Rice | nucleus | 8.94 | 6.61 |
| CDY31418 | Canola | plastid | 2.47 | 6.56 |
Protein Annotations
| EnsemblPlants:TraesCS3A01G219500.1 | EnsemblPlantsGene:TraesCS3A01G219500 | SEG:seg | MapMan:35.2 | : | : |
Description
No Description!
Coordinates
chr3A:+:403409530..403411479
Molecular Weight (calculated)
67295.7 Da
IEP (calculated)
4.129
GRAVY (calculated)
-0.326
Length
649 amino acids
Sequence
(BLAST)
(BLAST)
001: MLSSPEIGPP SENKPMISPP LFPSAAPPQE TPQPTTADPL EPAQSDHAES TPPPHPGVTA TSPEAYESTV SAPVHIDGKK REAGRPPSLS ASPALEATKP
101: EQHASPLPPP AAEAFPEAAT TEASPSPSHQ IVAASVVETP SPSTPSSPPA STAGALSDGS VADSAAMVSE EAGRLPAALE SMDANRPTAP APPTLPLKSE
201: PEGLLPQQHR RPPWPTVLPG CENFEHSQPP SPRPPQVEAA HGLPDAAQTN AIAVTSEEPG APSAWKSDSE GSFEVAMHIP LSSPTEAEPC SPDMAPPGFE
301: KFKFSWPPLP PPNLSVKTAH SLLNPAVPEG VAKPLPVLET MDTKAVAARN LPLPSSESGA EEPLWQPLLR SPSPITQAEP CSPDMPPPGF ENFKLSCMPL
401: SNENTYASSD VIAAKAVAVA PEEAVLPVPT LKAIDVETDS ACNLLPPLGS KLEGLLKQPS LRSTTPVAES GPCSPEIAPP GFESFRLSWQ PSSTPPSGTA
501: YIMPDAAVMP LPVTLEEAAG SPPALEAMDV DMNAIHPLTV PLESGVEGSL QEPQPRPPSP ILQDVPSSPD MAPPGFENFK SSRLLLPSPV FSQTAYTLHD
601: STTTIAEYVS EEAAQLSPAL EAIDVKMETS PESGAEGSFT TTTALAAIS
101: EQHASPLPPP AAEAFPEAAT TEASPSPSHQ IVAASVVETP SPSTPSSPPA STAGALSDGS VADSAAMVSE EAGRLPAALE SMDANRPTAP APPTLPLKSE
201: PEGLLPQQHR RPPWPTVLPG CENFEHSQPP SPRPPQVEAA HGLPDAAQTN AIAVTSEEPG APSAWKSDSE GSFEVAMHIP LSSPTEAEPC SPDMAPPGFE
301: KFKFSWPPLP PPNLSVKTAH SLLNPAVPEG VAKPLPVLET MDTKAVAARN LPLPSSESGA EEPLWQPLLR SPSPITQAEP CSPDMPPPGF ENFKLSCMPL
401: SNENTYASSD VIAAKAVAVA PEEAVLPVPT LKAIDVETDS ACNLLPPLGS KLEGLLKQPS LRSTTPVAES GPCSPEIAPP GFESFRLSWQ PSSTPPSGTA
501: YIMPDAAVMP LPVTLEEAAG SPPALEAMDV DMNAIHPLTV PLESGVEGSL QEPQPRPPSP ILQDVPSSPD MAPPGFENFK SSRLLLPSPV FSQTAYTLHD
601: STTTIAEYVS EEAAQLSPAL EAIDVKMETS PESGAEGSFT TTTALAAIS
0001: MMKQSSSEAV SSSSSSAAAD QSHPSVSSSS SEKPLSSSSI SPAEDLQVGS SRDGSGGAQE IVAVDRPGEY SALCRWTVES FTRVKAKALW SKYFDVGGYD
0101: CRLLVYPRGD SQALPGYISI YLQIMDPRGT TSSRWDCFAS YRLSIVNLVD DSLTIHKDSW HRFSSKKKSH GWCDFTLNSS ILDPKMGFLF NNDSLLITAD
0201: ILILNESVSF SRDNNNEGQS LYKENSIAGP MPDVLSGKFT WKVNNFSLFK DMIKTQKIMS PVFPAGECNL RISVYQSVVN SQEYISMCLE SKETEKTLVS
0301: DRSCWCLFRM SALNQKPGCT HMHRDSYGRF AADNKSGDNT SLGWNDYMKM SEFVNPEAGF LLDDMAVFST SFHVIKEFSS FTKNGGLIGG RNGAGARKSD
0401: GHMGKFTWRI ENFTRLKDLL KKRKITGLCI KSKRFQIGNR DCRLIVYPRG QSQPPCHLSV FLEVTDSRSS SDWSCFVSHR LSVVNQRLEE KSVTKESQNR
0501: YSKAAKDWGW REFVTLTSLF DQDSGFLVQD TVVFSAEVLI LKETSATKEY VEADSTNSVS PTDNSVKKSS FTWKVENFLA FKEIMETRKI FSKFFQAGGC
0601: ELRIGVYESF DTICIYLESD QSAGTDVDNN FWVKYKMGIL NQKNPAKSVW KESSICTKTW NNSVLQFMKV SDMLEADAGF LVRDTVVFVC EILDCCPWFE
0701: FSDLEVLASD DDQDALTTDP DEIIDSEESE GISGDEEDTF RDFLSRAGFH LTFGENPSQP QVTLREKLLM DAGAIAGFLT GLRVYLDDPT KVKRLLLPTK
0801: ISCNDRSKLI KSDESSPSLM NLLMGVKVLQ QAIIDLLLDI MVECCQPSEE GSHSEPSLLS PKTDGCVAAT SSESTRERGA AEPSQHLVDE RFKSDTDATL
0901: STSAVPSSEM NGIDLLEKAL AIEPMSPPTT SAGQSSDASV QSKTKWPEQS EELLGLIVNS LKTLDAAVPQ GCPEPRRRPH SAQKIALVLD RAPKHLQPDL
1001: VSLVPKLVEH SEHPLAALAL IERLQKPEAE PALREPVYNA LSQLECDSEV WEDILSQSFE LLSDLNEESL VAAIHFTFKT ASQCQHLPEA VNAVRERLKS
1101: LGADVSLCVL DYLSKTVHSW PGIAEMILRD INTDDSVGAN FATLPCGPFL IGENETASEM ADLMEEHIFY ANRQFFDVYI LLEMLSISCL AEEASQTFER
1201: AVARGAIVAQ AVAMVLEKQR VQSPNLNATS GDASLKHQDP VLEGEASEQP ATGGTEFRII LNLAETLTHS RDPQVRGFVK MLYTILFKWF PDQPFRVQIL
1301: RRLVDRFTSP TSSSHDLDLE LEILAILIFQ EQEVARPVLA MLKKVVEHAN IDRAALWHQL RANKEELVRL KEEKKIEIQS MTKEKSSITQ KLSESEAANT
1401: RLKVCAYLHI ICSKSDDAEG YWCSVIILLA NTVYQMAV
0101: CRLLVYPRGD SQALPGYISI YLQIMDPRGT TSSRWDCFAS YRLSIVNLVD DSLTIHKDSW HRFSSKKKSH GWCDFTLNSS ILDPKMGFLF NNDSLLITAD
0201: ILILNESVSF SRDNNNEGQS LYKENSIAGP MPDVLSGKFT WKVNNFSLFK DMIKTQKIMS PVFPAGECNL RISVYQSVVN SQEYISMCLE SKETEKTLVS
0301: DRSCWCLFRM SALNQKPGCT HMHRDSYGRF AADNKSGDNT SLGWNDYMKM SEFVNPEAGF LLDDMAVFST SFHVIKEFSS FTKNGGLIGG RNGAGARKSD
0401: GHMGKFTWRI ENFTRLKDLL KKRKITGLCI KSKRFQIGNR DCRLIVYPRG QSQPPCHLSV FLEVTDSRSS SDWSCFVSHR LSVVNQRLEE KSVTKESQNR
0501: YSKAAKDWGW REFVTLTSLF DQDSGFLVQD TVVFSAEVLI LKETSATKEY VEADSTNSVS PTDNSVKKSS FTWKVENFLA FKEIMETRKI FSKFFQAGGC
0601: ELRIGVYESF DTICIYLESD QSAGTDVDNN FWVKYKMGIL NQKNPAKSVW KESSICTKTW NNSVLQFMKV SDMLEADAGF LVRDTVVFVC EILDCCPWFE
0701: FSDLEVLASD DDQDALTTDP DEIIDSEESE GISGDEEDTF RDFLSRAGFH LTFGENPSQP QVTLREKLLM DAGAIAGFLT GLRVYLDDPT KVKRLLLPTK
0801: ISCNDRSKLI KSDESSPSLM NLLMGVKVLQ QAIIDLLLDI MVECCQPSEE GSHSEPSLLS PKTDGCVAAT SSESTRERGA AEPSQHLVDE RFKSDTDATL
0901: STSAVPSSEM NGIDLLEKAL AIEPMSPPTT SAGQSSDASV QSKTKWPEQS EELLGLIVNS LKTLDAAVPQ GCPEPRRRPH SAQKIALVLD RAPKHLQPDL
1001: VSLVPKLVEH SEHPLAALAL IERLQKPEAE PALREPVYNA LSQLECDSEV WEDILSQSFE LLSDLNEESL VAAIHFTFKT ASQCQHLPEA VNAVRERLKS
1101: LGADVSLCVL DYLSKTVHSW PGIAEMILRD INTDDSVGAN FATLPCGPFL IGENETASEM ADLMEEHIFY ANRQFFDVYI LLEMLSISCL AEEASQTFER
1201: AVARGAIVAQ AVAMVLEKQR VQSPNLNATS GDASLKHQDP VLEGEASEQP ATGGTEFRII LNLAETLTHS RDPQVRGFVK MLYTILFKWF PDQPFRVQIL
1301: RRLVDRFTSP TSSSHDLDLE LEILAILIFQ EQEVARPVLA MLKKVVEHAN IDRAALWHQL RANKEELVRL KEEKKIEIQS MTKEKSSITQ KLSESEAANT
1401: RLKVCAYLHI ICSKSDDAEG YWCSVIILLA NTVYQMAV
Arabidopsis Description
TRAF-like family protein [Source:TAIR;Acc:AT2G25320]
SUBAcon: [plastid,nucleus]
SUBAcon: [plastid,nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.