Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- cytosol 1
- mitochondrion 1
- nucleus 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KXG32887 | Sorghum | nucleus | 55.36 | 55.42 |
| GSMUA_Achr7P24410_001 | Banana | mitochondrion | 5.3 | 51.65 |
| KRH50040 | Soybean | cytosol | 6.09 | 42.19 |
| VIT_00s0181g00230.t01 | Wine grape | cytosol | 6.2 | 39.01 |
| Bra020902.1-P | Field mustard | cytosol | 5.86 | 37.14 |
| AT4G21610.1 | Thale cress | cytosol, nucleus, plastid | 5.98 | 34.19 |
| CDX76435 | Canola | cytosol | 5.41 | 31.17 |
| Zm00001d033262_P001 | Maize | extracellular | 5.3 | 24.74 |
| CDY31418 | Canola | plastid | 6.31 | 22.95 |
| Os01t0612700-01 | Rice | nucleus | 22.66 | 22.89 |
| Zm00001d049525_P004 | Maize | plastid | 4.96 | 21.89 |
| Zm00001d035195_P001 | Maize | mitochondrion | 3.49 | 20.67 |
| Zm00001d049625_P001 | Maize | plastid | 2.71 | 20.34 |
| PGSC0003DMT400076422 | Potato | nucleus | 7.78 | 17.65 |
| Solyc02g078270.2.1 | Tomato | nucleus | 7.44 | 17.46 |
| Zm00001d041474_P001 | Maize | mitochondrion | 5.86 | 16.83 |
| TraesCS3D01G233000.2 | Wheat | nucleus | 13.3 | 13.07 |
| TraesCS3B01G250000.3 | Wheat | nucleus | 11.61 | 11.8 |
| TraesCS3A01G219500.1 | Wheat | nucleus | 6.88 | 9.4 |
Protein Annotations
| EnsemblPlants:Zm00001d044463_P001 | EnsemblPlants:Zm00001d044463_T001 | EnsemblPlantsGene:Zm00001d044463 | InterPro:Znf_LSD1 | PANTHER:PTHR31747 | PANTHER:PTHR31747:SF4 |
| PFAM:PF06943 | ProteinID:ONM41236.1 | SEG:seg | TIGRFAMs:TIGR01053 | UniParc:UPI0008433201 | UniProt:A0A1D6NM01 |
| MapMan:27.2.1 | : | : | : | : | : |
Description
Protein LOL2
Coordinates
chr3:+:228864394..228874585
Molecular Weight (calculated)
92778.7 Da
IEP (calculated)
4.303
GRAVY (calculated)
-0.262
Length
887 amino acids
Sequence
(BLAST)
(BLAST)
001: MAASPGADEP LESSTVEHPE AVQPPSLPIV EAEPPPPLIG AAAAHEAISP KKSSSPSPHP ANLAVEVSPE VEASSSSPSP SSSPSPYPQI MEVLPGAPQP
101: LSPPRASPSV AARASTDLSI TEAMSMASQE AARPPPSPES TDAHLHTASA LPTSLMEIGP GVLVPQQQPR PPSPEMAPPL CDYSESAQPS PLCHPDGCTG
201: ASPDAPMDEV MTGTSGKAAG PSPGENSELA QSQLPHLPAE NTYVCSNAAG KISAVTSEEG TQPAMASIDG EGPLEIGAQR SLQELEETTT SFKMEAEPCS
301: PEMAPPGFED CKSQWLPLSH PNPLVESTHT VVQVTTTNAM GTTPDAATGS LSSPRLLPLL KRDTEGQTLP RSCSPTTEAA PCSPDMPPPG FENCKSSWLP
401: LPTLQPIAET THVLHDVAPT KSMVVGLMEK ACSVLALERT DVKIDSEQSL LPPLESETES SLQGPLPRSP SSMMKAIPCS PDTAPPGFEN LKFTQLQPPC
501: PPLVQTAHVL QNSANNEAMP VISKEAPQPL PALDATDLDI DAKPVLAPPS ESKPGQLSPE PPLLLPHVAQ HTTCSPGMTL LGSENIESSQ LLPRALVLPL
601: DQTSDILADA GTKKTVTMEE VCHPLPVAGV AEEANRSVLL PVTENGCEGQ SPHLELQTSS PAVNAAATSL EIAPGSFENS ESSQLISPCL AQTIDPTTHA
701: SGIMPTIVKS EKTNLPLSSL QATCTDMESA ILCQSPSKSE ERSLPQAEQH PSSPSVKDTT CSPEVAPPGY ENFDSLDQLP PSPPLCSKFE IGQMVCGSCR
801: QLVAYPTGAV HVQCFGCLTI NLVLEEHQVG KVYCGQCDTL LMYPFGAPAV KCSNCLFVTE IGVRPGPVFL RRLGEQVHQT TALAPRR
101: LSPPRASPSV AARASTDLSI TEAMSMASQE AARPPPSPES TDAHLHTASA LPTSLMEIGP GVLVPQQQPR PPSPEMAPPL CDYSESAQPS PLCHPDGCTG
201: ASPDAPMDEV MTGTSGKAAG PSPGENSELA QSQLPHLPAE NTYVCSNAAG KISAVTSEEG TQPAMASIDG EGPLEIGAQR SLQELEETTT SFKMEAEPCS
301: PEMAPPGFED CKSQWLPLSH PNPLVESTHT VVQVTTTNAM GTTPDAATGS LSSPRLLPLL KRDTEGQTLP RSCSPTTEAA PCSPDMPPPG FENCKSSWLP
401: LPTLQPIAET THVLHDVAPT KSMVVGLMEK ACSVLALERT DVKIDSEQSL LPPLESETES SLQGPLPRSP SSMMKAIPCS PDTAPPGFEN LKFTQLQPPC
501: PPLVQTAHVL QNSANNEAMP VISKEAPQPL PALDATDLDI DAKPVLAPPS ESKPGQLSPE PPLLLPHVAQ HTTCSPGMTL LGSENIESSQ LLPRALVLPL
601: DQTSDILADA GTKKTVTMEE VCHPLPVAGV AEEANRSVLL PVTENGCEGQ SPHLELQTSS PAVNAAATSL EIAPGSFENS ESSQLISPCL AQTIDPTTHA
701: SGIMPTIVKS EKTNLPLSSL QATCTDMESA ILCQSPSKSE ERSLPQAEQH PSSPSVKDTT CSPEVAPPGY ENFDSLDQLP PSPPLCSKFE IGQMVCGSCR
801: QLVAYPTGAV HVQCFGCLTI NLVLEEHQVG KVYCGQCDTL LMYPFGAPAV KCSNCLFVTE IGVRPGPVFL RRLGEQVHQT TALAPRR
001: MEEIQQQTQK EEQKHREEEE EEEEGPPPGW ESAVLPPPIV TITAAVNPNP TTVEIPEKAQ MVCGSCRRLL SYLRGSKHVK CSSCQTVNLV LEANQVGQVN
101: CNNCKLLLMY PYGAPAVRCS SCNSVTDISE NNKRPPWSEQ QGPLKSLSSL RRAEN
101: CNNCKLLLMY PYGAPAVRCS SCNSVTDISE NNKRPPWSEQ QGPLKSLSSL RRAEN
Arabidopsis Description
LOL2Protein LOL2 [Source:UniProtKB/Swiss-Prot;Acc:O65426]
SUBAcon: [plastid,nucleus,cytosol]
SUBAcon: [plastid,nucleus,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.