Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 6
- mitochondrion 2
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS4D01G053400.2 | Wheat | plastid | 87.84 | 86.01 |
| TraesCS4A01G299400.1 | Wheat | plastid | 86.02 | 82.27 |
| TraesCS6B01G357800.1 | Wheat | plastid | 83.59 | 79.94 |
| Os03t0654600-01 | Rice | plastid | 78.12 | 74.93 |
| Zm00001d013651_P001 | Maize | plastid | 72.04 | 69.5 |
| KXG37915 | Sorghum | plastid | 71.12 | 68.62 |
| VIT_01s0010g00590.t01 | Wine grape | plastid | 64.44 | 61.45 |
| GSMUA_Achr2P03080_001 | Banana | plastid | 65.05 | 60.28 |
| Bra005827.1-P | Field mustard | plastid | 63.53 | 60.23 |
| CDX80928 | Canola | plastid | 63.22 | 59.94 |
| CDY11316 | Canola | plastid | 63.53 | 59.89 |
| Solyc05g032660.2.1 | Tomato | plastid | 62.61 | 59.54 |
| KRH13102 | Soybean | plastid | 62.61 | 59.03 |
| AT5G04900.1 | Thale cress | plastid | 62.31 | 58.91 |
| CDY43444 | Canola | plastid | 41.64 | 51.5 |
| PGSC0003DMT400033934 | Potato | plastid | 10.94 | 31.86 |
| TraesCS3A01G151900.1 | Wheat | mitochondrion | 34.04 | 25.45 |
Protein Annotations
| EnsemblPlants:TraesCS4A01G261200.1 | EnsemblPlantsGene:TraesCS4A01G261200 | Gene3D:3.40.50.720 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0016491 | InterPro:NAD(P)-bd_dom_sf | InterPro:SDR_fam | InterPro:Sc_DH/Rdtase_CS | PANTHER:PTHR24314 |
| PANTHER:PTHR24314:SF15 | PFAM:PF00106 | PRINTS:PR00080 | PRINTS:PR00081 | ScanProsite:PS00061 | SEG:seg |
| SUPFAM:SSF51735 | TIGR:cd05233 | MapMan:7.12.6.6.4.2 | : | : | : |
Description
No Description!
Coordinates
chr4A:-:573665312..573669541
Molecular Weight (calculated)
36020.5 Da
IEP (calculated)
10.041
GRAVY (calculated)
-0.157
Length
329 amino acids
Sequence
(BLAST)
(BLAST)
001: MATVAASLPL RAAARAGPAP PRAPPSDAAF FPGRPWQRRL AARGRPWGSV GWFRAEALPG GAGGPPRRES MAPPYNVLIT GSTKGIGYAL ARKFLKAGDN
101: VVICSRSAER VESVANDLKK EFGEQHVGLS VMLEKALVDF ARDKLEYIDI WINNAGSNAY SYKPLVETSD EALIEVITTN TLGLMLCCRE AINMMWNQPQ
201: GGHIFNIDDG RPTPRFAAYG ATKRSVVHLT KSLQAELQMN EVNNVVPGMV TTDLLMSGAT AKQAKFFINI LAETADVVAD YLVPNIREIP TKQSMKPTYI
301: RFLTGLKAYS RIFSRIAFGA RRNKYVAED
101: VVICSRSAER VESVANDLKK EFGEQHVGLS VMLEKALVDF ARDKLEYIDI WINNAGSNAY SYKPLVETSD EALIEVITTN TLGLMLCCRE AINMMWNQPQ
201: GGHIFNIDDG RPTPRFAAYG ATKRSVVHLT KSLQAELQMN EVNNVVPGMV TTDLLMSGAT AKQAKFFINI LAETADVVAD YLVPNIREIP TKQSMKPTYI
301: RFLTGLKAYS RIFSRIAFGA RRNKYVAED
001: MATWSGFNVS SSPLLRLRSS SVSNVTKLPF LSPICRRRLL AERFGLATVV VTRQNLTVTP SSAAVEARIS GKREPMTPPY NILITGSTKG IGYALAREFL
101: KAGDNVVICS RSAERVETAV QSLKEEFGEH VWGTKCDVTE GKDVRELVAY SQKNLKYIDI WINNAGSNAY SFKPLAEASD EDLIEVVKTN TLGLMLCCRE
201: AMNMMLTQSR GGHIFNIDGA GSDGRPTPRF AAYGATKRSV VHLTKSLQAE LQMQDVKNVV VHNLSPGMVT TDLLMSGATT KQAKFFINVL AEPAEVVAEY
301: LVPNIRAIPA SGSMKPTYIR FLTGIKAYTK IFSRVALGAR KNRYVTEE
101: KAGDNVVICS RSAERVETAV QSLKEEFGEH VWGTKCDVTE GKDVRELVAY SQKNLKYIDI WINNAGSNAY SFKPLAEASD EDLIEVVKTN TLGLMLCCRE
201: AMNMMLTQSR GGHIFNIDGA GSDGRPTPRF AAYGATKRSV VHLTKSLQAE LQMQDVKNVV VHNLSPGMVT TDLLMSGATT KQAKFFINVL AEPAEVVAEY
301: LVPNIRAIPA SGSMKPTYIR FLTGIKAYTK IFSRVALGAR KNRYVTEE
Arabidopsis Description
NOLChlorophyll(ide) b reductase NOL, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q8LEU3]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.