Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 7
- mitochondrion 2
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra005827.1-P | Field mustard | plastid | 88.51 | 88.76 |
| CDY11316 | Canola | plastid | 88.51 | 88.25 |
| CDX80928 | Canola | plastid | 87.64 | 87.9 |
| CDY43444 | Canola | plastid | 59.2 | 77.44 |
| VIT_01s0010g00590.t01 | Wine grape | plastid | 67.24 | 67.83 |
| KRH13102 | Soybean | plastid | 67.82 | 67.62 |
| Solyc05g032660.2.1 | Tomato | plastid | 66.95 | 67.34 |
| TraesCS4A01G299400.1 | Wheat | plastid | 66.09 | 66.86 |
| TraesCS4D01G012100.1 | Wheat | plastid | 65.8 | 66.38 |
| Os03t0654600-01 | Rice | plastid | 64.94 | 65.89 |
| TraesCS6B01G357800.1 | Wheat | plastid | 64.08 | 64.83 |
| KXG37915 | Sorghum | plastid | 63.22 | 64.52 |
| Zm00001d013651_P001 | Maize | plastid | 62.64 | 63.93 |
| TraesCS4D01G053400.2 | Wheat | plastid | 61.21 | 63.39 |
| GSMUA_Achr2P03080_001 | Banana | plastid | 64.08 | 62.82 |
| TraesCS4A01G261200.1 | Wheat | plastid | 58.91 | 62.31 |
| PGSC0003DMT400033934 | Potato | plastid | 11.21 | 34.51 |
| AT4G13250.1 | Thale cress | cytosol | 33.91 | 23.79 |
Protein Annotations
| Gene3D:3.40.50.720 | MapMan:7.12.6.6.4.2 | EntrezGene:830372 | UniProt:A0A178UDW6 | EMBL:AB255027 | ProteinID:AED90802.1 |
| ArrayExpress:AT5G04900 | EnsemblPlantsGene:AT5G04900 | RefSeq:AT5G04900 | TAIR:AT5G04900 | RefSeq:AT5G04900-TAIR-G | EnsemblPlants:AT5G04900.1 |
| TAIR:AT5G04900.1 | EMBL:AY085229 | ProteinID:BAB11512.1 | EMBL:BT025238 | GO:GO:0003674 | GO:GO:0003824 |
| GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009056 | GO:GO:0009507 | GO:GO:0009535 | GO:GO:0009536 |
| GO:GO:0009579 | GO:GO:0009987 | GO:GO:0010304 | GO:GO:0015996 | GO:GO:0016020 | GO:GO:0016491 |
| GO:GO:0019538 | GO:GO:0034256 | GO:GO:0055114 | InterPro:NAD(P)-bd_dom_sf | Symbol:NOL | RefSeq:NP_568145.1 |
| ProteinID:OAO91905.1 | PFAM:PF00106 | PO:PO:0000013 | PO:PO:0000037 | PO:PO:0000230 | PO:PO:0000293 |
| PO:PO:0001054 | PO:PO:0001078 | PO:PO:0001081 | PO:PO:0001185 | PO:PO:0004507 | PO:PO:0007064 |
| PO:PO:0007095 | PO:PO:0007098 | PO:PO:0007103 | PO:PO:0007115 | PO:PO:0007123 | PO:PO:0007611 |
| PO:PO:0007616 | PO:PO:0008019 | PO:PO:0009006 | PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009025 |
| PO:PO:0009029 | PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 |
| PO:PO:0009052 | PO:PO:0020030 | PO:PO:0020038 | PO:PO:0020100 | PO:PO:0020137 | PO:PO:0025022 |
| PO:PO:0025281 | PRINTS:PR00080 | PRINTS:PR00081 | ScanProsite:PS00061 | PANTHER:PTHR24314 | PANTHER:PTHR24314:SF15 |
| UniProt:Q8LEU3 | InterPro:SDR_fam | SUPFAM:SSF51735 | InterPro:Sc_DH/Rdtase_CS | UniParc:UPI00000A9779 | SEG:seg |
Description
NOLChlorophyll(ide) b reductase NOL, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q8LEU3]
Coordinates
chr5:+:1434774..1437495
Molecular Weight (calculated)
38151.2 Da
IEP (calculated)
9.907
GRAVY (calculated)
-0.083
Length
348 amino acids
Sequence
(BLAST)
(BLAST)
001: MATWSGFNVS SSPLLRLRSS SVSNVTKLPF LSPICRRRLL AERFGLATVV VTRQNLTVTP SSAAVEARIS GKREPMTPPY NILITGSTKG IGYALAREFL
101: KAGDNVVICS RSAERVETAV QSLKEEFGEH VWGTKCDVTE GKDVRELVAY SQKNLKYIDI WINNAGSNAY SFKPLAEASD EDLIEVVKTN TLGLMLCCRE
201: AMNMMLTQSR GGHIFNIDGA GSDGRPTPRF AAYGATKRSV VHLTKSLQAE LQMQDVKNVV VHNLSPGMVT TDLLMSGATT KQAKFFINVL AEPAEVVAEY
301: LVPNIRAIPA SGSMKPTYIR FLTGIKAYTK IFSRVALGAR KNRYVTEE
101: KAGDNVVICS RSAERVETAV QSLKEEFGEH VWGTKCDVTE GKDVRELVAY SQKNLKYIDI WINNAGSNAY SFKPLAEASD EDLIEVVKTN TLGLMLCCRE
201: AMNMMLTQSR GGHIFNIDGA GSDGRPTPRF AAYGATKRSV VHLTKSLQAE LQMQDVKNVV VHNLSPGMVT TDLLMSGATT KQAKFFINVL AEPAEVVAEY
301: LVPNIRAIPA SGSMKPTYIR FLTGIKAYTK IFSRVALGAR KNRYVTEE
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.