Factsheet for Os03t0654600-01

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1
plastid 6
mitochondrion 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	mitochondrion, plastid, secretory
BaCelLo:	secretory
iPSORT:	plastid
MultiLoc:	plastid
Plant-mPloc:	plastid
Predotar:	plastid
PProwler:	mitochondrion
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	mitochondrion

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS4A01G299400.1	Wheat	plastid	81.92	81.69
TraesCS4D01G012100.1	Wheat	plastid	81.34	80.87
TraesCS6B01G357800.1	Wheat	plastid	79.59	79.36
TraesCS4A01G261200.1	Wheat	plastid	74.93	78.12
TraesCS4D01G053400.2	Wheat	plastid	76.38	77.98
Zm00001d013651_P001	Maize	plastid	76.38	76.83
KXG37915	Sorghum	plastid	75.8	76.25
VIT_01s0010g00590.t01	Wine grape	plastid	68.51	68.12
Solyc05g032660.2.1	Tomato	plastid	67.35	66.76
KRH13102	Soybean	plastid	67.64	66.48
GSMUA_Achr2P03080_001	Banana	plastid	68.22	65.92
CDX80928	Canola	plastid	66.47	65.71
Bra005827.1-P	Field mustard	plastid	66.18	65.42
CDY11316	Canola	plastid	66.47	65.33
AT5G04900.1	Thale cress	plastid	65.89	64.94
CDY43444	Canola	plastid	43.15	55.64
PGSC0003DMT400033934	Potato	plastid	10.5	31.86
Os01t0227100-01	Rice	mitochondrion	35.86	24.4

Protein Annotations

Gene3D:3.40.50.720	EntrezGene:4333604	MapMan:7.12.6.6.4.2	ProteinID:AAO73232.1	ProteinID:AAT78833.1	ProteinID:AAT78834.1
EMBL:AB255026	ProteinID:ABF97956.1	ProteinID:BAS85540.1	ProteinID:EEE59614.1	GO:GO:0003674	GO:GO:0003824
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0008150	GO:GO:0008152
GO:GO:0009056	GO:GO:0009507	GO:GO:0009535	GO:GO:0009536	GO:GO:0009579	GO:GO:0009987
GO:GO:0010304	GO:GO:0015996	GO:GO:0016020	GO:GO:0016491	GO:GO:0019538	GO:GO:0034256
GO:GO:0055114	InterPro:NAD(P)-bd_dom_sf	EnsemblPlantsGene:Os03g0654600	EnsemblPlants:Os03t0654600-01	PFAM:PF00106	PRINTS:PR00080
PRINTS:PR00081	ScanProsite:PS00061	PANTHER:PTHR24314	PANTHER:PTHR24314:SF15	UniProt:Q84ST4	InterPro:SDR_fam
SUPFAM:SSF51735	InterPro:Sc_DH/Rdtase_CS	UniParc:UPI00000561AB	RefSeq:XP_015628274.1	SEG:seg	:

Description

NYC1-LIKESimilar to Myb-like DNA-binding domain, SHAQKYF class family protein, expressed. (Os03t0654600-01)

Coordinates

chr3:-:25520279..25525342

Molecular Weight (calculated)

37005.9 Da

IEP (calculated)

10.232

GRAVY (calculated)

-0.104

Length

343 amino acids

Sequence
(BLAST)

001: MAATAAYLPL RAQAQVGLAP LRPSGSAAAG ARLPGRTARR RLAARGGPEA AGIRAEAVPG GGGVARRAAM VPPYNVLITG STKGIGYALA KEFLKAGDNV
101: VICSRSAERV ESAVTDLKKE FGEQHVWGIV CDVREGKDVK ALVDFARDKM KYIDIWINNA GSNAYSYKPL VETSDEALME VITTNTLGLM ICCREAINMM
201: RNQPRGGHIF NIDGAGSDGR PTPRFAAYGA TKRSVVHLTK SLQAELQMNE VNNVMVHNLS PGMVTTDLLM SGATTKQAKF FINILAEPAN VVADYLVPNI
301: RAIPTNQSMK PTYIRFLTGL KAYSRIFSRI AFGARRNKYV AED

Best Arabidopsis Sequence Match ( AT5G04900.1 )
(BLAST)

001: MATWSGFNVS SSPLLRLRSS SVSNVTKLPF LSPICRRRLL AERFGLATVV VTRQNLTVTP SSAAVEARIS GKREPMTPPY NILITGSTKG IGYALAREFL
101: KAGDNVVICS RSAERVETAV QSLKEEFGEH VWGTKCDVTE GKDVRELVAY SQKNLKYIDI WINNAGSNAY SFKPLAEASD EDLIEVVKTN TLGLMLCCRE
201: AMNMMLTQSR GGHIFNIDGA GSDGRPTPRF AAYGATKRSV VHLTKSLQAE LQMQDVKNVV VHNLSPGMVT TDLLMSGATT KQAKFFINVL AEPAEVVAEY
301: LVPNIRAIPA SGSMKPTYIR FLTGIKAYTK IFSRVALGAR KNRYVTEE

Arabidopsis Description

NOLChlorophyll(ide) b reductase NOL, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q8LEU3]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.