CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 9

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	plastid
BaCelLo:	plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	plastid
Predotar:	plastid
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX80928	Canola	plastid	93.23	71.47
Bra005827.1-P	Field mustard	plastid	91.35	70.03
CDY11316	Canola	plastid	89.47	68.19
AT5G04900.1	Thale cress	plastid	77.44	59.2
TraesCS4A01G299400.1	Wheat	plastid	57.89	44.77
TraesCS4D01G012100.1	Wheat	plastid	57.89	44.64
VIT_01s0010g00590.t01	Wine grape	plastid	57.14	44.06
Zm00001d013651_P001	Maize	plastid	56.39	43.99
KXG37915	Sorghum	plastid	56.02	43.7
TraesCS6B01G357800.1	Wheat	plastid	56.39	43.6
Solyc05g032660.2.1	Tomato	plastid	56.39	43.35
Os03t0654600-01	Rice	plastid	55.64	43.15
KRH13102	Soybean	plastid	55.26	42.12
TraesCS4D01G053400.2	Wheat	plastid	53.01	41.96
TraesCS4A01G261200.1	Wheat	plastid	51.5	41.64
GSMUA_Achr2P03080_001	Banana	plastid	54.51	40.85
PGSC0003DMT400033934	Potato	plastid	14.29	33.63
CDY67729	Canola	cytosol	22.93	19.55
CDY01120	Canola	cytosol, mitochondrion	33.46	17.35
CDY47326	Canola	cytosol, mitochondrion	31.2	16.87

Protein Annotations

EnsemblPlants:CDY43444	EnsemblPlantsGene:GSBRNA2T00076669001	Gene3D:3.40.50.720	GO:A0A078I1F9	GO:GO:0005575	GO:GO:0016020
GO:GO:0016021	InterPro:NAD(P)-bd_dom_sf	InterPro:SDR_fam	PANTHER:PTHR24314	PANTHER:PTHR24314:SF15	PFAM:PF00106
PRINTS:PR00081	ProteinID:CDY43444	ProteinID:CDY43444.1	SEG:seg	SUPFAM:SSF51735	TMHMM:TMhelix
UniParc:UPI0004EE4848	UniProt:A0A078I1F9	MapMan:35.1	:	:	:

Description

BnaAnng07160DBnaAnng07160D protein [Source:UniProtKB/TrEMBL;Acc:A0A078I1F9]

Coordinates

chrLK032557:+:87447..88748

Molecular Weight (calculated)

29078.8 Da

IEP (calculated)

7.809

GRAVY (calculated)

-0.014

Length

266 amino acids

Sequence
(BLAST)

001: MAASSGFHIS SSPFLRLRSS SVAYAAQPPF LSPCNGRSLA ESFGLATVTV SRQNLSVSPP SAVVEARISG TIDPMTPPYN VLITGSTQGI GHALAREFLK
101: AGDNVVICSR SAERVESVVE SLKEEYGEHV WGTKCDVREG KDVKDLVGYC QKNLKYIDIW INNAGSNAYS FKPLSEASDE DLIEVVKTNT LGLMLCCREA
201: MNMMLTQSRG GHIFNIDGAG SDGRPTPRFA AYGATKRSVV HLTKSYIYIY IYIYIYIYIS VLNFLS

Best Arabidopsis Sequence Match ( AT5G04900.1 )
(BLAST)

001: MATWSGFNVS SSPLLRLRSS SVSNVTKLPF LSPICRRRLL AERFGLATVV VTRQNLTVTP SSAAVEARIS GKREPMTPPY NILITGSTKG IGYALAREFL
101: KAGDNVVICS RSAERVETAV QSLKEEFGEH VWGTKCDVTE GKDVRELVAY SQKNLKYIDI WINNAGSNAY SFKPLAEASD EDLIEVVKTN TLGLMLCCRE
201: AMNMMLTQSR GGHIFNIDGA GSDGRPTPRF AAYGATKRSV VHLTKSLQAE LQMQDVKNVV VHNLSPGMVT TDLLMSGATT KQAKFFINVL AEPAEVVAEY
301: LVPNIRAIPA SGSMKPTYIR FLTGIKAYTK IFSRVALGAR KNRYVTEE

Arabidopsis Description

NOLChlorophyll(ide) b reductase NOL, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q8LEU3]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.