Subcellular Localization
min:
: max
Winner_takes_all: extracellular, endoplasmic reticulum
Predictor Summary:
Predictor Summary:
- extracellular 5
- golgi 4
- plasma membrane 4
- endoplasmic reticulum 5
- vacuole 4
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS7A01G122900.1 | Wheat | endoplasmic reticulum, extracellular | 97.57 | 97.18 |
| TraesCS7B01G022000.1 | Wheat | endoplasmic reticulum, extracellular | 96.36 | 96.36 |
| TraesCS4D01G145000.1 | Wheat | endoplasmic reticulum, extracellular | 90.28 | 89.92 |
| HORVU7Hr1G025910.4 | Barley | peroxisome | 87.45 | 68.35 |
| VIT_09s0002g04150.t01 | Wine grape | cytosol | 53.85 | 68.21 |
| Solyc03g120540.2.1 | Tomato | cytosol | 53.44 | 67.01 |
| KRH44327 | Soybean | cytosol | 53.04 | 65.83 |
| PGSC0003DMT400006782 | Potato | cytosol | 51.82 | 64.97 |
| Bra027184.1-P | Field mustard | cytosol | 50.2 | 63.27 |
| VIT_09s0002g04140.t01 | Wine grape | cytosol | 47.77 | 63.1 |
| CDX97729 | Canola | cytosol | 50.2 | 62.94 |
| AT3G16190.1 | Thale cress | cytosol | 49.39 | 62.24 |
| KRH47257 | Soybean | mitochondrion | 56.28 | 52.26 |
| KRH44325 | Soybean | mitochondrion | 34.01 | 44.44 |
| TraesCS1D01G133100.1 | Wheat | extracellular, peroxisome, plastid | 23.08 | 34.13 |
| VIT_18s0001g10290.t01 | Wine grape | cytosol, peroxisome, plastid | 14.17 | 22.73 |
Protein Annotations
| EnsemblPlants:TraesCS7D01G121100.1 | EnsemblPlantsGene:TraesCS7D01G121100 | Gene3D:3.40.50.850 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0008150 |
| GO:GO:0008152 | InterPro:IPR036380 | InterPro:Isochorismatase-like | InterPro:Isochorismatase-like_sf | PANTHER:PTHR11080 | PANTHER:PTHR11080:SF57 |
| PFAM:PF00857 | SEG:seg | SignalP:SignalP-noTM | SUPFAM:SSF52499 | TIGR:cd00431 | MapMan:35.1 |
Description
No Description!
Coordinates
chr7D:+:75266630..75270145
Molecular Weight (calculated)
27139.3 Da
IEP (calculated)
9.074
GRAVY (calculated)
0.153
Length
247 amino acids
Sequence
(BLAST)
(BLAST)
001: MPSHLALLSC LLVLLLSLDK FFLHYLKRWL SGGGSIIPRI PTGAFKAHSH RPMAAAGRWS ETAMLVIDMQ KDFVDPAMGS PVLVAGGEAV VPAVAEAVAV
101: ARERGIFVVW VVREHDPSGR DVELFRRHLY SGGKGPTVKG LKGAELADGL FIKEGDYKLV KTRFSAFFAT HLDSVLKTQG IKNLVIVGVQ TPNCIRQTVY
201: DAVELDYEKV IVLIDATAAA RPDIHLANIR DMKTIGVETP TLEEWRR
101: ARERGIFVVW VVREHDPSGR DVELFRRHLY SGGKGPTVKG LKGAELADGL FIKEGDYKLV KTRFSAFFAT HLDSVLKTQG IKNLVIVGVQ TPNCIRQTVY
201: DAVELDYEKV IVLIDATAAA RPDIHLANIR DMKTIGVETP TLEEWRR
001: MAERWRNTAL LVIDMQNDFI EEGAVTQVKG GKSIVPNVIR VVELARQRGI LVIWVVREHD RQGRDVELFR RHNYSSEKVG PVIKGTVGAE LVDGLMINEE
101: DDYKIVKTRF SAFFSTNLHS FLQTSGVTKL VIAGVQTPNC IRQTVFDAVA LDYPNVTVIT DATAAATPEI HTANILDMKN IGVKTPTLHE WSEELA
101: DDYKIVKTRF SAFFSTNLHS FLQTSGVTKL VIAGVQTPNC IRQTVFDAVA LDYPNVTVIT DATAAATPEI HTANILDMKN IGVKTPTLHE WSEELA
Arabidopsis Description
Probable inactive nicotinamidase At3g16190 [Source:UniProtKB/Swiss-Prot;Acc:Q93Z51]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.