Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- peroxisome 1
- plastid 1
- extracellular 1
- mitochondrion 1
- cytosol 2
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX97729 | Canola | cytosol | 98.47 | 97.97 |
| AT3G16190.1 | Thale cress | cytosol | 87.24 | 87.24 |
| KRH44327 | Soybean | cytosol | 72.96 | 71.86 |
| VIT_09s0002g04150.t01 | Wine grape | cytosol | 70.41 | 70.77 |
| Solyc03g120540.2.1 | Tomato | cytosol | 64.8 | 64.47 |
| Os02t0276200-01 | Rice | cytosol | 58.16 | 64.04 |
| PGSC0003DMT400006782 | Potato | cytosol | 63.78 | 63.45 |
| VIT_09s0002g04140.t01 | Wine grape | cytosol | 59.69 | 62.57 |
| Os02t0276400-01 | Rice | plasma membrane | 63.78 | 62.19 |
| KXG30028 | Sorghum | cytosol | 59.69 | 60.0 |
| KRH47257 | Soybean | mitochondrion | 72.96 | 53.76 |
| Zm00001d015986_P002 | Maize | extracellular | 64.29 | 51.85 |
| KXG30030 | Sorghum | extracellular | 62.76 | 50.41 |
| TraesCS7D01G121100.1 | Wheat | endoplasmic reticulum, extracellular | 63.27 | 50.2 |
| TraesCS7A01G122900.1 | Wheat | endoplasmic reticulum, extracellular | 62.76 | 49.6 |
| TraesCS7B01G022000.1 | Wheat | endoplasmic reticulum, extracellular | 61.73 | 48.99 |
| TraesCS4D01G145000.1 | Wheat | endoplasmic reticulum, extracellular | 60.2 | 47.58 |
| KRH44325 | Soybean | mitochondrion | 42.86 | 44.44 |
| HORVU7Hr1G025910.4 | Barley | peroxisome | 56.63 | 35.13 |
| TraesCS1D01G133100.1 | Wheat | extracellular, peroxisome, plastid | 23.47 | 27.54 |
| VIT_18s0001g10290.t01 | Wine grape | cytosol, peroxisome, plastid | 20.41 | 25.97 |
| HORVU3Hr1G038260.3 | Barley | mitochondrion | 13.78 | 14.21 |
| HORVU4Hr1G043950.16 | Barley | plastid | 17.86 | 11.08 |
Protein Annotations
| EnsemblPlants:Bra027184.1 | EnsemblPlants:Bra027184.1-P | EnsemblPlantsGene:Bra027184 | Gene3D:3.40.50.850 | GO:GO:0003674 | GO:GO:0003824 |
| GO:GO:0008150 | GO:GO:0008152 | InterPro:IPR036380 | InterPro:Isochorismatase-like | InterPro:Isochorismatase-like_sf | PANTHER:PTHR11080 |
| PANTHER:PTHR11080:SF58 | PFAM:PF00857 | SEG:seg | SUPFAM:SSF52499 | UniParc:UPI000254783D | UniProt:M4EEH2 |
| MapMan:35.1 | : | : | : | : | : |
Description
AT3G16190 (E=8e-091) | isochorismatase hydrolase family protein
Coordinates
chrA05:+:19571746..19572979
Molecular Weight (calculated)
21904.3 Da
IEP (calculated)
6.157
GRAVY (calculated)
-0.084
Length
196 amino acids
Sequence
(BLAST)
(BLAST)
001: MAERWTNTAL LVIDMQNDFI EEGSVTQVKG GKAIVPNVIG VVELARQRGI LVVWVVREHD PQGRDVEIFR RHHYRSEKVG PVVKGTLGSK LVDGLNIREE
101: EDYKIVKTRF SAFFGTHLHS FLQTSGITKL VIAGVQTPNC IRQTVFDAVE LDYPDVTVIV DATAAATPEI HTANLLDMRN IGVKTPTLHE WSEEFA
101: EDYKIVKTRF SAFFGTHLHS FLQTSGITKL VIAGVQTPNC IRQTVFDAVE LDYPDVTVIV DATAAATPEI HTANLLDMRN IGVKTPTLHE WSEEFA
001: MAERWRNTAL LVIDMQNDFI EEGAVTQVKG GKSIVPNVIR VVELARQRGI LVIWVVREHD RQGRDVELFR RHNYSSEKVG PVIKGTVGAE LVDGLMINEE
101: DDYKIVKTRF SAFFSTNLHS FLQTSGVTKL VIAGVQTPNC IRQTVFDAVA LDYPNVTVIT DATAAATPEI HTANILDMKN IGVKTPTLHE WSEELA
101: DDYKIVKTRF SAFFSTNLHS FLQTSGVTKL VIAGVQTPNC IRQTVFDAVA LDYPNVTVIT DATAAATPEI HTANILDMKN IGVKTPTLHE WSEELA
Arabidopsis Description
Probable inactive nicotinamidase At3g16190 [Source:UniProtKB/Swiss-Prot;Acc:Q93Z51]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.