Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| HORVU3Hr1G038260.3 | Barley | mitochondrion | 31.01 | 51.58 |
| Os02t0276400-01 | Rice | plasma membrane | 16.77 | 26.37 |
| KXG30030 | Sorghum | extracellular | 19.3 | 25.0 |
| Zm00001d015986_P002 | Maize | extracellular | 18.35 | 23.87 |
| TraesCS4D01G145000.1 | Wheat | endoplasmic reticulum, extracellular | 18.67 | 23.79 |
| HORVU7Hr1G025910.4 | Barley | peroxisome | 21.52 | 21.52 |
| Solyc03g120540.2.1 | Tomato | cytosol | 13.29 | 21.32 |
| PGSC0003DMT400006782 | Potato | cytosol | 12.66 | 20.3 |
| VIT_09s0002g04150.t01 | Wine grape | cytosol | 12.34 | 20.0 |
| KRH44327 | Soybean | cytosol | 12.34 | 19.6 |
| Os02t0276200-01 | Rice | cytosol | 10.76 | 19.1 |
| KRH44325 | Soybean | mitochondrion | 11.39 | 19.05 |
| Bra027184.1-P | Field mustard | cytosol | 11.08 | 17.86 |
| CDX97729 | Canola | cytosol | 11.08 | 17.77 |
| KRH47257 | Soybean | mitochondrion | 14.87 | 17.67 |
| AT3G16190.1 | Thale cress | cytosol | 10.13 | 16.33 |
| VIT_09s0002g04140.t01 | Wine grape | cytosol | 9.18 | 15.51 |
| VIT_18s0001g10290.t01 | Wine grape | cytosol, peroxisome, plastid | 2.85 | 5.84 |
Protein Annotations
| EnsemblPlants:HORVU4Hr1G043950.16 | EnsemblPlantsGene:HORVU4Hr1G043950 | PANTHER:PTHR11080 | PANTHER:PTHR11080:SF57 | SEG:seg | UniParc:UPI000B48031F |
| UniProt:A0A287NWG9 | MapMan:35.2 | : | : | : | : |
Description
No Description!
Coordinates
chrchr4H:-:351340067..351343563
Molecular Weight (calculated)
34281.2 Da
IEP (calculated)
10.430
GRAVY (calculated)
-0.390
Length
316 amino acids
Sequence
(BLAST)
(BLAST)
001: HPARATDSSH LRSGAATPNS PKIWTAIGVL WRRPRQHRSS TTTSSARSSS ASASPTSSSA PPSPPSGGLL HDSDPVFLRR FRDRNPPRVL GVCVGYSMRP
101: YKFVPLPQPP GLSALSSSSC GLLLRRHLRP RRPTHRALPE RPPHRRVPPQ GNIQALRPCA ATLLEPEVVL PPIPPPRRQH NPAAPGKWSE TTMLVIDMQK
201: DFVDTAMCSP VLVAGGEAVV PTVAEAVAVP WERDIFIGWG STTVCGRMRP SLFPESTHLF DRDTCMTGWN MGGKEPQFMG LMVGHLGGAA PDPHHPLLQV
301: PQEPREGWVP GDCSCA
101: YKFVPLPQPP GLSALSSSSC GLLLRRHLRP RRPTHRALPE RPPHRRVPPQ GNIQALRPCA ATLLEPEVVL PPIPPPRRQH NPAAPGKWSE TTMLVIDMQK
201: DFVDTAMCSP VLVAGGEAVV PTVAEAVAVP WERDIFIGWG STTVCGRMRP SLFPESTHLF DRDTCMTGWN MGGKEPQFMG LMVGHLGGAA PDPHHPLLQV
301: PQEPREGWVP GDCSCA
001: MAERWRNTAL LVIDMQNDFI EEGAVTQVKG GKSIVPNVIR VVELARQRGI LVIWVVREHD RQGRDVELFR RHNYSSEKVG PVIKGTVGAE LVDGLMINEE
101: DDYKIVKTRF SAFFSTNLHS FLQTSGVTKL VIAGVQTPNC IRQTVFDAVA LDYPNVTVIT DATAAATPEI HTANILDMKN IGVKTPTLHE WSEELA
101: DDYKIVKTRF SAFFSTNLHS FLQTSGVTKL VIAGVQTPNC IRQTVFDAVA LDYPNVTVIT DATAAATPEI HTANILDMKN IGVKTPTLHE WSEELA
Arabidopsis Description
Probable inactive nicotinamidase At3g16190 [Source:UniProtKB/Swiss-Prot;Acc:Q93Z51]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.