CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 6
endoplasmic reticulum 5
vacuole 5
plasma membrane 5
golgi 5
plastid 2
peroxisome 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	peroxisome, plastid, secretory
BaCelLo:	secretory
ChloroP:	plastid
iPSORT:	secretory
MultiLoc:	peroxisome
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d015986_P002	Maize	extracellular	91.39	91.77
Os02t0276400-01	Rice	plasma membrane	71.72	87.06
TraesCS7B01G022000.1	Wheat	endoplasmic reticulum, extracellular	84.84	83.81
TraesCS7A01G122900.1	Wheat	endoplasmic reticulum, extracellular	84.84	83.47
Os02t0276200-01	Rice	cytosol	59.02	80.9
KXG30028	Sorghum	cytosol	63.93	80.0
VIT_09s0002g04150.t01	Wine grape	cytosol	54.51	68.21
Solyc03g120540.2.1	Tomato	cytosol	54.92	68.02
KRH44327	Soybean	cytosol	54.1	66.33
PGSC0003DMT400006782	Potato	cytosol	53.28	65.99
Bra027184.1-P	Field mustard	cytosol	50.41	62.76
CDX97729	Canola	cytosol	50.41	62.44
AT3G16190.1	Thale cress	cytosol	50.0	62.24
VIT_09s0002g04140.t01	Wine grape	cytosol	47.54	62.03
HORVU7Hr1G025910.4	Barley	peroxisome	79.92	61.71
KRH47257	Soybean	mitochondrion	56.97	52.26
KRH44325	Soybean	mitochondrion	34.84	44.97
TraesCS1D01G133100.1	Wheat	extracellular, peroxisome, plastid	22.13	32.34
HORVU3Hr1G038260.3	Barley	mitochondrion	22.13	28.42
VIT_18s0001g10290.t01	Wine grape	cytosol, peroxisome, plastid	15.16	24.03
HORVU4Hr1G043950.16	Barley	plastid	25.0	19.3

Protein Annotations

EnsemblPlants:KXG30030	EnsemblPlantsGene:SORBI_3004G125700	Gene3D:3.40.50.850	GO:GO:0003674	GO:GO:0003824	GO:GO:0008150
GO:GO:0008152	InterPro:IPR036380	InterPro:Isochorismatase-like	InterPro:Isochorismatase-like_sf	PANTHER:PTHR11080	PANTHER:PTHR11080:SF57
PFAM:PF00857	ProteinID:KXG30030	ProteinID:KXG30030.1	SEG:seg	SignalP:SignalP-TM	SUPFAM:SSF52499
UniParc:UPI0007F2615A	UniProt:A0A194YQC8	MapMan:35.1	:	:	:

Description

hypothetical protein

Coordinates

chr4:-:14759004..14770039

Molecular Weight (calculated)

26859.8 Da

IEP (calculated)

10.054

GRAVY (calculated)

0.067

Length

244 amino acids

Sequence
(BLAST)

001: MPSHLALLSC LLVLVLSFDK FLFHYLRRRW FSGGGSGATV PRAPAKSRRT MAAAKWSETA MLVIDMQKDF VDPAMRSPML VAGGEAVVPA VAEAVAVARE
101: RGIFLVWVVR EHDPSGRDVE LFRRQHYSGG KGPTVKGLKG AELADGLVIK EGEYKLVKTR FSAFFATHLD SVLKTAGIKN LVIVGVQTPN CIRQTVFDAV
201: ALDYEKVTVL IDATAAARPE IHLSNIRDMK NIGVDTPTVE EWRR

Best Arabidopsis Sequence Match ( AT3G16190.1 )
(BLAST)

001: MAERWRNTAL LVIDMQNDFI EEGAVTQVKG GKSIVPNVIR VVELARQRGI LVIWVVREHD RQGRDVELFR RHNYSSEKVG PVIKGTVGAE LVDGLMINEE
101: DDYKIVKTRF SAFFSTNLHS FLQTSGVTKL VIAGVQTPNC IRQTVFDAVA LDYPNVTVIT DATAAATPEI HTANILDMKN IGVKTPTLHE WSEELA

Arabidopsis Description

Probable inactive nicotinamidase At3g16190 [Source:UniProtKB/Swiss-Prot;Acc:Q93Z51]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.