Subcellular Localization
min:
: max
Winner_takes_all: peroxisome
Predictor Summary:
Predictor Summary:
- plastid 2
- peroxisome 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS7A01G122900.1 | Wheat | endoplasmic reticulum, extracellular | 69.62 | 88.71 |
| TraesCS7D01G121100.1 | Wheat | endoplasmic reticulum, extracellular | 68.35 | 87.45 |
| TraesCS7B01G022000.1 | Wheat | endoplasmic reticulum, extracellular | 68.35 | 87.45 |
| KXG30030 | Sorghum | extracellular | 61.71 | 79.92 |
| Zm00001d015986_P002 | Maize | extracellular | 60.13 | 78.19 |
| Os02t0276400-01 | Rice | plasma membrane | 46.84 | 73.63 |
| Os02t0276200-01 | Rice | cytosol | 40.19 | 71.35 |
| VIT_09s0002g04150.t01 | Wine grape | cytosol | 37.66 | 61.03 |
| Solyc03g120540.2.1 | Tomato | cytosol | 37.66 | 60.41 |
| KRH44327 | Soybean | cytosol | 37.34 | 59.3 |
| PGSC0003DMT400006782 | Potato | cytosol | 36.39 | 58.38 |
| VIT_09s0002g04140.t01 | Wine grape | cytosol | 33.54 | 56.68 |
| Bra027184.1-P | Field mustard | cytosol | 35.13 | 56.63 |
| CDX97729 | Canola | cytosol | 34.81 | 55.84 |
| AT3G16190.1 | Thale cress | cytosol | 34.18 | 55.1 |
| KRH47257 | Soybean | mitochondrion | 40.51 | 48.12 |
| KRH44325 | Soybean | mitochondrion | 26.58 | 44.44 |
| HORVU3Hr1G038260.3 | Barley | mitochondrion | 18.99 | 31.58 |
| HORVU4Hr1G043950.16 | Barley | plastid | 21.52 | 21.52 |
| VIT_18s0001g10290.t01 | Wine grape | cytosol, peroxisome, plastid | 9.49 | 19.48 |
Protein Annotations
| EnsemblPlants:HORVU7Hr1G025910.4 | EnsemblPlantsGene:HORVU7Hr1G025910 | Gene3D:3.40.50.850 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0008150 |
| GO:GO:0008152 | InterPro:IPR036380 | InterPro:Isochorismatase-like | InterPro:Isochorismatase-like_sf | PANTHER:PTHR11080 | PANTHER:PTHR11080:SF58 |
| PFAM:PF00857 | SEG:seg | SUPFAM:SSF52499 | UniParc:UPI000B470A70 | UniProt:A0A287VS96 | MapMan:35.1 |
Description
No Description!
Coordinates
chrchr7H:-:43960993..43963925
Molecular Weight (calculated)
34984.1 Da
IEP (calculated)
10.403
GRAVY (calculated)
0.104
Length
316 amino acids
Sequence
(BLAST)
(BLAST)
001: PVRPHPLSDQ TLSLSPIPRV VRIPLHKNHS NSASPWINKK EGRRFLPRFF LLSRARFMPS HLALLSCLLV LVLSLDKFLL HYLKRRWLSG GGGSIIPRIP
101: TSPFRPHRPM AAAGKWSETA MLVIDMQKDF VDPAMGSPVL VAGGEAVVPA VAEAVAVARE RGIFVVWVVR EHDPSGRDVE LFRRHLYSGG KGPTVKGLKG
201: AELADGLFIK EGDYKLVKTR FSAFFATHLD SVLKTQGIKN LVIVGVQTPN CIRQTVYDAV ELDYEKVMVL IDATAAARPD IHLGEHSSFA LALLFYSPRQ
301: IRMKLALGDS LCICLN
101: TSPFRPHRPM AAAGKWSETA MLVIDMQKDF VDPAMGSPVL VAGGEAVVPA VAEAVAVARE RGIFVVWVVR EHDPSGRDVE LFRRHLYSGG KGPTVKGLKG
201: AELADGLFIK EGDYKLVKTR FSAFFATHLD SVLKTQGIKN LVIVGVQTPN CIRQTVYDAV ELDYEKVMVL IDATAAARPD IHLGEHSSFA LALLFYSPRQ
301: IRMKLALGDS LCICLN
001: MAERWRNTAL LVIDMQNDFI EEGAVTQVKG GKSIVPNVIR VVELARQRGI LVIWVVREHD RQGRDVELFR RHNYSSEKVG PVIKGTVGAE LVDGLMINEE
101: DDYKIVKTRF SAFFSTNLHS FLQTSGVTKL VIAGVQTPNC IRQTVFDAVA LDYPNVTVIT DATAAATPEI HTANILDMKN IGVKTPTLHE WSEELA
101: DDYKIVKTRF SAFFSTNLHS FLQTSGVTKL VIAGVQTPNC IRQTVFDAVA LDYPNVTVIT DATAAATPEI HTANILDMKN IGVKTPTLHE WSEELA
Arabidopsis Description
Probable inactive nicotinamidase At3g16190 [Source:UniProtKB/Swiss-Prot;Acc:Q93Z51]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.