Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum, extracellular
Predictor Summary:
Predictor Summary:
- extracellular 5
- endoplasmic reticulum 5
- vacuole 4
- plasma membrane 4
- golgi 4
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS7A01G122900.1 | Wheat | endoplasmic reticulum, extracellular | 96.76 | 96.37 |
| TraesCS7D01G121100.1 | Wheat | endoplasmic reticulum, extracellular | 96.36 | 96.36 |
| KXG30030 | Sorghum | extracellular | 83.81 | 84.84 |
| Zm00001d015986_P002 | Maize | extracellular | 83.4 | 84.77 |
| Os02t0276400-01 | Rice | plasma membrane | 66.8 | 82.09 |
| Os02t0276200-01 | Rice | cytosol | 57.49 | 79.78 |
| HORVU7Hr1G025910.4 | Barley | peroxisome | 87.45 | 68.35 |
| VIT_09s0002g04150.t01 | Wine grape | cytosol | 53.04 | 67.18 |
| Solyc03g120540.2.1 | Tomato | cytosol | 53.44 | 67.01 |
| PGSC0003DMT400006782 | Potato | cytosol | 51.82 | 64.97 |
| KRH44327 | Soybean | cytosol | 51.82 | 64.32 |
| VIT_09s0002g04140.t01 | Wine grape | cytosol | 47.37 | 62.57 |
| Bra027184.1-P | Field mustard | cytosol | 48.99 | 61.73 |
| CDX97729 | Canola | cytosol | 48.99 | 61.42 |
| AT3G16190.1 | Thale cress | cytosol | 48.18 | 60.71 |
| KRH47257 | Soybean | mitochondrion | 55.47 | 51.5 |
| KRH44325 | Soybean | mitochondrion | 33.6 | 43.92 |
| VIT_18s0001g10290.t01 | Wine grape | cytosol, peroxisome, plastid | 14.17 | 22.73 |
Protein Annotations
| EnsemblPlants:TraesCS7B01G022000.1 | EnsemblPlantsGene:TraesCS7B01G022000 | Gene3D:3.40.50.850 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0008150 |
| GO:GO:0008152 | InterPro:IPR036380 | InterPro:Isochorismatase-like | InterPro:Isochorismatase-like_sf | PANTHER:PTHR11080 | PANTHER:PTHR11080:SF57 |
| PFAM:PF00857 | SEG:seg | SignalP:SignalP-noTM | SUPFAM:SSF52499 | TIGR:cd00431 | MapMan:35.1 |
Description
No Description!
Coordinates
chr7B:+:20834755..20838195
Molecular Weight (calculated)
27161.3 Da
IEP (calculated)
9.073
GRAVY (calculated)
0.147
Length
247 amino acids
Sequence
(BLAST)
(BLAST)
001: MPSHLALLSC LLVLLLSLDK FLLHYLKRWL SGGGSIIPRI PTGAFSPRSH RTMAAAGKWS ETAMLIIDMQ KDFVDPAMGS PMLVAGGEAV VPAVAEAVAV
101: ARERGIFVVW VVREHDPSGR DVELFRRHLY SGGKGPTVKG LKGAELADGL FIKEGDYKLV KTRFSAFFAT HLDSVLKTQG IKNLVIVGVQ TPNCIRQTVY
201: DAVELDYEKV IVLIDATAAA RPDIHLANIR DMKTISVETP TLEEWRR
101: ARERGIFVVW VVREHDPSGR DVELFRRHLY SGGKGPTVKG LKGAELADGL FIKEGDYKLV KTRFSAFFAT HLDSVLKTQG IKNLVIVGVQ TPNCIRQTVY
201: DAVELDYEKV IVLIDATAAA RPDIHLANIR DMKTISVETP TLEEWRR
001: MAERWRNTAL LVIDMQNDFI EEGAVTQVKG GKSIVPNVIR VVELARQRGI LVIWVVREHD RQGRDVELFR RHNYSSEKVG PVIKGTVGAE LVDGLMINEE
101: DDYKIVKTRF SAFFSTNLHS FLQTSGVTKL VIAGVQTPNC IRQTVFDAVA LDYPNVTVIT DATAAATPEI HTANILDMKN IGVKTPTLHE WSEELA
101: DDYKIVKTRF SAFFSTNLHS FLQTSGVTKL VIAGVQTPNC IRQTVFDAVA LDYPNVTVIT DATAAATPEI HTANILDMKN IGVKTPTLHE WSEELA
Arabidopsis Description
Probable inactive nicotinamidase At3g16190 [Source:UniProtKB/Swiss-Prot;Acc:Q93Z51]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.