Skip to main content
crop-pal logo
Rice
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • cytosol 4
  • extracellular 2
  • endoplasmic reticulum 2
  • vacuole 2
  • plasma membrane 2
  • golgi 2
  • peroxisome 1
  • plastid 1
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Os02t0276400-01 Rice plasma membrane 79.78 70.65
VIT_09s0002g04150.t01 Wine grape cytosol 69.66 63.59
KRH44327 Soybean cytosol 69.66 62.31
VIT_09s0002g04140.t01 Wine grape cytosol 63.48 60.43
Solyc03g120540.2.1 Tomato cytosol 66.29 59.9
Zm00001d015986_P002 Maize extracellular 81.46 59.67
KXG30030 Sorghum extracellular 80.9 59.02
PGSC0003DMT400006782 Potato cytosol 65.17 58.88
Bra027184.1-P Field mustard cytosol 64.04 58.16
AT3G16190.1 Thale cress cytosol 63.48 57.65
TraesCS7B01G022000.1 Wheat endoplasmic reticulum, extracellular 79.78 57.49
CDX97729 Canola cytosol 63.48 57.36
TraesCS7A01G122900.1 Wheat endoplasmic reticulum, extracellular 79.78 57.26
KRH47257 Soybean mitochondrion 67.98 45.49
HORVU7Hr1G025910.4 Barley peroxisome 71.35 40.19
KRH44325 Soybean mitochondrion 37.64 35.45
TraesCS1D01G133100.1 Wheat extracellular, peroxisome, plastid 28.65 30.54
VIT_18s0001g10290.t01 Wine grape cytosol, peroxisome, plastid 21.35 24.68
HORVU3Hr1G038260.3 Barley mitochondrion 14.04 13.16
HORVU4Hr1G043950.16 Barley plastid 19.1 10.76
Protein Annotations
Gene3D:3.40.50.850MapMan:35.1UniProt:A0A0P0VHI0ProteinID:BAS78092.1GO:GO:0003674GO:GO:0003824
GO:GO:0005575GO:GO:0005622GO:GO:0005623GO:GO:0005737GO:GO:0006139GO:GO:0006212
GO:GO:0008150GO:GO:0008152GO:GO:0009056GO:GO:0009987GO:GO:0016787InterPro:IPR036380
InterPro:Isochorismatase-likeInterPro:Isochorismatase-like_sfEnsemblPlantsGene:Os02g0276200EnsemblPlants:Os02t0276200-01PFAM:PF00857PANTHER:PTHR11080
PANTHER:PTHR11080:SF57SUPFAM:SSF52499UniParc:UPI000393C45CSEG:seg::
Description
Similar to Isochorismatase family protein rutB. (Os02t0276200-01)
Coordinates
chr2:-:10135285..10143931
Molecular Weight (calculated)
19358.3 Da
IEP (calculated)
6.960
GRAVY (calculated)
0.062
Length
178 amino acids
Sequence
(BLAST)
001: MQKDFVDPAT SSAALLAGEA ILPTVTAAVA VARQRGIFIV WVVREHDPSG RDVELFRRHF YSSGKGLGVE GSKGAELADG LTIKDGDYKL VKTRFSAFFA
101: THLDSVLKTS GIKNLVIVGV QTPNCIRQTV FDAVALDYDK VAVIIDATAA AKPEIHLSNM IDMKNIGVET PTLEEWRR
Best Arabidopsis Sequence Match ( AT3G16190.1 )
(BLAST)
001: MAERWRNTAL LVIDMQNDFI EEGAVTQVKG GKSIVPNVIR VVELARQRGI LVIWVVREHD RQGRDVELFR RHNYSSEKVG PVIKGTVGAE LVDGLMINEE
101: DDYKIVKTRF SAFFSTNLHS FLQTSGVTKL VIAGVQTPNC IRQTVFDAVA LDYPNVTVIT DATAAATPEI HTANILDMKN IGVKTPTLHE WSEELA
Arabidopsis Description
Probable inactive nicotinamidase At3g16190 [Source:UniProtKB/Swiss-Prot;Acc:Q93Z51]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.