Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum, extracellular
Predictor Summary:
Predictor Summary:
- extracellular 5
- endoplasmic reticulum 5
- vacuole 4
- plasma membrane 4
- golgi 4
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS7D01G121100.1 | Wheat | endoplasmic reticulum, extracellular | 97.18 | 97.57 |
| TraesCS7B01G022000.1 | Wheat | endoplasmic reticulum, extracellular | 96.37 | 96.76 |
| KXG30030 | Sorghum | extracellular | 83.47 | 84.84 |
| Zm00001d015986_P002 | Maize | extracellular | 82.66 | 84.36 |
| Os02t0276400-01 | Rice | plasma membrane | 66.13 | 81.59 |
| Os02t0276200-01 | Rice | cytosol | 57.26 | 79.78 |
| HORVU7Hr1G025910.4 | Barley | peroxisome | 88.71 | 69.62 |
| VIT_09s0002g04150.t01 | Wine grape | cytosol | 53.23 | 67.69 |
| Solyc03g120540.2.1 | Tomato | cytosol | 53.63 | 67.51 |
| KRH44327 | Soybean | cytosol | 53.23 | 66.33 |
| PGSC0003DMT400006782 | Potato | cytosol | 52.02 | 65.48 |
| VIT_09s0002g04140.t01 | Wine grape | cytosol | 47.98 | 63.64 |
| Bra027184.1-P | Field mustard | cytosol | 49.6 | 62.76 |
| CDX97729 | Canola | cytosol | 49.6 | 62.44 |
| AT3G16190.1 | Thale cress | cytosol | 48.79 | 61.73 |
| KRH47257 | Soybean | mitochondrion | 56.45 | 52.63 |
| KRH44325 | Soybean | mitochondrion | 33.87 | 44.44 |
| VIT_18s0001g10290.t01 | Wine grape | cytosol, peroxisome, plastid | 14.11 | 22.73 |
Protein Annotations
| EnsemblPlants:TraesCS7A01G122900.1 | EnsemblPlantsGene:TraesCS7A01G122900 | Gene3D:3.40.50.850 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0008150 |
| GO:GO:0008152 | InterPro:IPR036380 | InterPro:Isochorismatase-like | InterPro:Isochorismatase-like_sf | PANTHER:PTHR11080 | PANTHER:PTHR11080:SF57 |
| PFAM:PF00857 | SEG:seg | SignalP:SignalP-noTM | SUPFAM:SSF52499 | TIGR:cd00431 | MapMan:35.1 |
Description
No Description!
Coordinates
chr7A:+:79539160..79542703
Molecular Weight (calculated)
27221.4 Da
IEP (calculated)
9.407
GRAVY (calculated)
0.132
Length
248 amino acids
Sequence
(BLAST)
(BLAST)
001: MPSHLALLSC LLVLLLSLDK FLLHYLKRWL SGGGGSIIPR IPTGAFRPRS HRPMAAAGRW SETAMLVIDM QKDFVDPAMG SPVLVAGGEA VVPAVAEAVA
101: VARERGIFVV WVVREHDPSG RDVELFRRHL YSGGKGPTVK GLKGAELADG LFIKEGDYKL VKTRFSAFFA THLDSVLKTQ GIKNLVVVGV QTPNCIRQTV
201: YDAVELDYEK VIVLIDATAA ARPDIHLANI RDMKTIGVET PTLEEWRR
101: VARERGIFVV WVVREHDPSG RDVELFRRHL YSGGKGPTVK GLKGAELADG LFIKEGDYKL VKTRFSAFFA THLDSVLKTQ GIKNLVVVGV QTPNCIRQTV
201: YDAVELDYEK VIVLIDATAA ARPDIHLANI RDMKTIGVET PTLEEWRR
001: MAERWRNTAL LVIDMQNDFI EEGAVTQVKG GKSIVPNVIR VVELARQRGI LVIWVVREHD RQGRDVELFR RHNYSSEKVG PVIKGTVGAE LVDGLMINEE
101: DDYKIVKTRF SAFFSTNLHS FLQTSGVTKL VIAGVQTPNC IRQTVFDAVA LDYPNVTVIT DATAAATPEI HTANILDMKN IGVKTPTLHE WSEELA
101: DDYKIVKTRF SAFFSTNLHS FLQTSGVTKL VIAGVQTPNC IRQTVFDAVA LDYPNVTVIT DATAAATPEI HTANILDMKN IGVKTPTLHE WSEELA
Arabidopsis Description
Probable inactive nicotinamidase At3g16190 [Source:UniProtKB/Swiss-Prot;Acc:Q93Z51]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.