Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane, vacuole, cytosol
Predictor Summary:
Predictor Summary:
- cytosol 1
- extracellular 1
- endoplasmic reticulum 1
- vacuole 2
- plasma membrane 2
- golgi 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| HORVU4Hr1G089870.1 | Barley | cytosol | 45.19 | 22.38 |
| TraesCS3D01G055800.1 | Wheat | cytosol | 43.27 | 20.93 |
| TraesCSU01G125200.1 | Wheat | cytosol | 54.81 | 17.12 |
| TraesCSU01G125500.1 | Wheat | cytosol | 54.81 | 17.12 |
| KRH43850 | Soybean | cytosol | 22.12 | 8.04 |
| Bra009407.1-P | Field mustard | cytosol | 23.08 | 7.82 |
| AT5G04950.1 | Thale cress | cytosol | 24.04 | 7.81 |
| VIT_11s0052g01150.t01 | Wine grape | plastid | 21.15 | 7.75 |
| CDX98807 | Canola | cytosol | 22.12 | 7.74 |
| CDX70180 | Canola | cytosol | 24.04 | 7.69 |
| KRH13614 | Soybean | cytosol | 21.15 | 7.69 |
| GSMUA_Achr5P21100_001 | Banana | cytosol | 23.08 | 7.62 |
| Bra005831.1-P | Field mustard | cytosol | 23.08 | 7.5 |
| CDX80931 | Canola | cytosol | 23.08 | 7.5 |
| CDY11321 | Canola | cytosol | 23.08 | 7.5 |
| CDY42364 | Canola | cytosol | 23.08 | 7.45 |
| CDY39002 | Canola | cytosol | 23.08 | 7.45 |
| Bra038164.1-P | Field mustard | cytosol | 23.08 | 7.43 |
| AT1G56430.1 | Thale cress | cytosol | 23.08 | 7.41 |
| CDX94325 | Canola | cytosol | 19.23 | 7.19 |
| CDY69948 | Canola | cytosol | 19.23 | 7.19 |
| CDY06526 | Canola | cytosol | 22.12 | 7.19 |
| CDY28616 | Canola | cytosol | 22.12 | 7.19 |
| Bra035602.1-P | Field mustard | cytosol | 22.12 | 7.19 |
| AT5G56080.1 | Thale cress | cytosol | 22.12 | 7.19 |
| CDY64985 | Canola | cytosol | 22.12 | 7.19 |
| Bra004521.1-P | Field mustard | cytosol | 12.5 | 7.03 |
| PGSC0003DMT400007275 | Potato | cytosol | 21.15 | 6.94 |
| Solyc01g100490.2.1 | Tomato | cytosol | 21.15 | 6.94 |
| CDY17383 | Canola | cytosol | 21.15 | 6.88 |
| AT1G09240.1 | Thale cress | cytosol | 21.15 | 6.88 |
| Bra002851.1-P | Field mustard | cytosol | 21.15 | 6.88 |
| VIT_14s0060g01190.t01 | Wine grape | cytosol | 21.15 | 6.81 |
| CDY09316 | Canola | cytosol | 6.73 | 6.8 |
| KRG96720 | Soybean | cytosol | 20.19 | 6.67 |
| CDX94991 | Canola | cytosol | 20.19 | 6.5 |
| CDX93517 | Canola | cytosol | 20.19 | 6.5 |
| Bra018573.1-P | Field mustard | cytosol | 20.19 | 6.5 |
| KRH36982 | Soybean | cytosol | 19.23 | 6.47 |
| CDY01124 | Canola | cytosol | 7.69 | 6.35 |
| GSMUA_Achr2P00420_001 | Banana | cytosol | 18.27 | 6.01 |
| AT4G26483.1 | Thale cress | cytosol, extracellular, plastid | 4.81 | 5.95 |
| KRH68436 | Soybean | cytosol | 18.27 | 5.92 |
| CDY46596 | Canola | cytosol | 10.58 | 5.29 |
| GSMUA_Achr11P... | Banana | cytosol | 19.23 | 3.38 |
Protein Annotations
| EnsemblPlants:TraesCSU01G125100.1 | EnsemblPlantsGene:TraesCSU01G125100 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0009058 | GO:GO:0009987 | GO:GO:0016740 | GO:GO:0030410 | GO:GO:0030418 | InterPro:IPR004298 |
| InterPro:Nicotian_synth | PANTHER:PTHR32266 | PANTHER:PTHR32266:SF10 | PFAM:PF03059 | TMHMM:TMhelix | MapMan:25.4.3.1.1 |
Description
No Description!
Coordinates
chrUn:+:108576688..108577002
Molecular Weight (calculated)
11335.1 Da
IEP (calculated)
5.555
GRAVY (calculated)
0.833
Length
104 amino acids
Sequence
(BLAST)
(BLAST)
001: MAAQNNKEVD ALVEKITGLH AAIAKLPSLS PSPAVDALFT ELVTACVPPV RVILMMSFGL LYSCFLASSY ICIYDCFCLL VIQVAYFPNM VLELGLFSRT
101: HNSC
101: HNSC
001: MGYCQDDQLV NKICDLYEKI SKLETLKPCE DVDTLFKQLV STCIPPNPNI DVTKMSENIQ EMRSNLIKIC GEAEGYLEHH FSSILTSFED NPLHHLNLFP
101: YYNNYLKLSK LEFDLLEQNL NGFVPRTVAF IGSGPLPLTS VVLASSHLKD SIFHNFDIDP SANMVAARLV SSDPDLSQRM FFHTVDIMDV TESLKGFDVV
201: FLAALVGMDK KEKVKVVEHL EKHMSPGALL MLRSAHGPRA FLYPIVEPCD LEGFEVLSVY HPTDEVINSI VISRKLGEDA NGVVHDHIDQ ASDLACNCSK
301: IHVIMNKKKS IIEEFAGANE EQLT
101: YYNNYLKLSK LEFDLLEQNL NGFVPRTVAF IGSGPLPLTS VVLASSHLKD SIFHNFDIDP SANMVAARLV SSDPDLSQRM FFHTVDIMDV TESLKGFDVV
201: FLAALVGMDK KEKVKVVEHL EKHMSPGALL MLRSAHGPRA FLYPIVEPCD LEGFEVLSVY HPTDEVINSI VISRKLGEDA NGVVHDHIDQ ASDLACNCSK
301: IHVIMNKKKS IIEEFAGANE EQLT
Arabidopsis Description
NAS4Probable nicotianamine synthase 4 [Source:UniProtKB/Swiss-Prot;Acc:Q9C7X5]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.