Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- plastid 1
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY09316 | Canola | cytosol | 70.63 | 86.41 |
| Bra004521.1-P | Field mustard | cytosol | 76.19 | 51.89 |
| CDX94325 | Canola | cytosol | 76.98 | 34.89 |
| CDY69948 | Canola | cytosol | 76.19 | 34.53 |
| CDX98807 | Canola | cytosol | 53.97 | 22.9 |
| CDY64985 | Canola | cytosol | 53.97 | 21.25 |
| CDY11321 | Canola | cytosol | 53.97 | 21.25 |
| CDY06526 | Canola | cytosol | 53.97 | 21.25 |
| CDX80931 | Canola | cytosol | 53.17 | 20.94 |
| CDX70180 | Canola | cytosol | 53.17 | 20.62 |
| CDY17383 | Canola | cytosol | 51.59 | 20.31 |
| CDY28616 | Canola | cytosol | 51.59 | 20.31 |
| CDX94991 | Canola | cytosol | 46.83 | 18.27 |
| CDY42364 | Canola | cytosol | 46.03 | 18.01 |
| CDX93517 | Canola | cytosol | 46.03 | 17.96 |
| CDY39002 | Canola | cytosol | 45.24 | 17.7 |
| KRG96720 | Soybean | cytosol | 42.86 | 17.14 |
| VIT_14s0060g01190.t01 | Wine grape | cytosol | 43.65 | 17.03 |
| KRH68436 | Soybean | cytosol | 42.86 | 16.82 |
| GSMUA_Achr5P21100_001 | Banana | cytosol | 39.68 | 15.87 |
| GSMUA_Achr2P00420_001 | Banana | cytosol | 38.89 | 15.51 |
| PGSC0003DMT400007275 | Potato | cytosol | 38.89 | 15.46 |
| Solyc01g100490.2.1 | Tomato | cytosol | 38.1 | 15.14 |
| HORVU4Hr1G089870.1 | Barley | cytosol | 23.81 | 14.29 |
| KRH36982 | Soybean | cytosol | 34.13 | 13.92 |
| HORVU0Hr1G017720.1 | Barley | cytosol, plastid | 28.57 | 13.48 |
| TraesCS3D01G055800.1 | Wheat | cytosol | 22.22 | 13.02 |
| TraesCS6D01G382900.1 | Wheat | cytosol, plastid | 31.75 | 12.2 |
| CDY46596 | Canola | cytosol | 19.84 | 12.02 |
| TraesCS6B01G438900.1 | Wheat | cytosol, plastid | 30.95 | 11.89 |
| TraesCS6A01G398700.1 | Wheat | cytosol, plastid | 29.37 | 11.28 |
| TraesCS4B01G183900.1 | Wheat | cytosol | 26.19 | 10.0 |
| TraesCS2D01G033000.1 | Wheat | peroxisome | 23.02 | 9.76 |
| TraesCS6B01G425200.1 | Wheat | cytosol, peroxisome, plastid | 25.4 | 9.7 |
| TraesCS2D01G049200.1 | Wheat | cytosol | 25.4 | 9.7 |
| HORVU4Hr1G053770.1 | Barley | cytosol | 25.4 | 9.7 |
| TraesCS2B01G060800.1 | Wheat | cytosol | 25.4 | 9.7 |
| TraesCS2A01G049900.1 | Wheat | cytosol | 25.4 | 9.7 |
| TraesCS6D01G370800.1 | Wheat | cytosol | 25.4 | 9.7 |
| TraesCS2A01G033500.1 | Wheat | cytosol | 21.43 | 9.64 |
| TraesCS6A01G386200.1 | Wheat | cytosol | 24.6 | 9.39 |
| TraesCS6A01G093000.1 | Wheat | cytosol | 24.6 | 9.39 |
| HORVU4Hr1G053790.1 | Barley | cytosol | 24.6 | 9.39 |
| TraesCS2B01G047100.2 | Wheat | cytosol | 23.02 | 9.32 |
| TraesCSU01G125200.1 | Wheat | cytosol | 24.6 | 9.31 |
| TraesCS5A01G552400.1 | Wheat | cytosol | 24.6 | 9.31 |
| TraesCS5A01G552000.1 | Wheat | cytosol | 24.6 | 9.31 |
| TraesCSU01G125500.1 | Wheat | cytosol | 24.6 | 9.31 |
| TraesCS6A01G163100.1 | Wheat | cytosol | 23.81 | 9.2 |
| Os03t0307200-01 | Rice | endoplasmic reticulum | 23.81 | 9.2 |
| TraesCS6A01G163200.1 | Wheat | cytosol | 23.02 | 9.18 |
| TraesCS2B01G111100.1 | Wheat | cytosol | 24.6 | 9.12 |
| TraesCS2D01G094200.1 | Wheat | cytosol | 24.6 | 9.12 |
| TraesCS3A01G468300.1 | Wheat | plastid | 24.6 | 9.12 |
| HORVU4Hr1G053850.2 | Barley | cytosol, plasma membrane | 24.6 | 8.83 |
| TraesCS2A01G095700.1 | Wheat | cytosol | 23.81 | 8.82 |
| TraesCS6D01G148600.1 | Wheat | cytosol | 23.02 | 8.81 |
| TraesCS6D01G148200.1 | Wheat | cytosol | 23.02 | 8.81 |
| TraesCS6D01G148000.1 | Wheat | cytosol | 23.02 | 8.81 |
| TraesCS6B01G187400.1 | Wheat | cytosol | 23.02 | 8.81 |
| TraesCS6B01G186100.1 | Wheat | cytosol | 23.02 | 8.81 |
| TraesCS6A01G165100.1 | Wheat | cytosol | 23.02 | 8.81 |
| Zm00001d047658_P001 | Maize | cytosol | 22.22 | 8.56 |
| Zm00001d047651_P001 | Maize | cytosol, endoplasmic reticulum, extracellular | 22.22 | 8.56 |
| HORVU6Hr1G090040.1 | Barley | cytosol | 23.81 | 8.36 |
| TraesCS4D01G184900.1 | Wheat | plastid | 25.4 | 8.33 |
| Zm00001d047656_P001 | Maize | cytosol | 21.43 | 8.26 |
| HORVU2Hr1G015980.1 | Barley | cytosol | 22.22 | 8.24 |
| HORVU6Hr1G032290.1 | Barley | cytosol | 16.67 | 7.87 |
| TraesCSU01G125100.1 | Wheat | cytosol, plasma membrane, vacuole | 6.35 | 7.69 |
| Os07t0689600-01 | Rice | cytosol | 20.63 | 7.58 |
| Zm00001d033496_P001 | Maize | cytosol | 21.43 | 7.52 |
| Zm00001d022557_P001 | Maize | cytosol | 21.43 | 7.44 |
| GSMUA_Achr11P... | Banana | cytosol | 34.13 | 7.28 |
| EER93732 | Sorghum | cytosol | 20.63 | 7.16 |
| Zm00001d013655_P001 | Maize | cytosol | 19.05 | 6.74 |
| HORVU2Hr1G004960.1 | Barley | mitochondrion | 21.43 | 6.73 |
| HORVU6Hr1G090180.2 | Barley | nucleus | 23.81 | 4.92 |
| KXG39528 | Sorghum | cytosol | 21.43 | 4.47 |
| Zm00001d028887_P001 | Maize | cytosol | 20.63 | 4.33 |
| Zm00001d028888_P001 | Maize | cytosol, extracellular | 19.84 | 4.16 |
| Zm00001d047639_P004 | Maize | extracellular | 22.22 | 2.83 |
| HORVU3Hr1G010650.1 | Barley | plastid | 3.97 | 1.96 |
| Zm00001d012829_P001 | Maize | cytosol | 0.0 | 0.0 |
| HORVU4Hr1G089750.2 | Barley | cytosol | 0.0 | 0.0 |
| AT4G26483.1 | Thale cress | cytosol, extracellular, plastid | 0.0 | 0.0 |
| TraesCS3B01G068400.1 | Wheat | cytosol | 0.0 | 0.0 |
| TraesCS3B01G068500.1 | Wheat | cytosol | 0.0 | 0.0 |
Protein Annotations
| MapMan:25.4.3.1.1 | Gene3D:3.40.50.150 | GO:A0A078EK73 | EnsemblPlants:CDY01124 | ProteinID:CDY01124 | ProteinID:CDY01124.1 |
| ncoils:Coil | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 |
| GO:GO:0009987 | GO:GO:0016740 | GO:GO:0030410 | GO:GO:0030418 | EnsemblPlantsGene:GSBRNA2T00111188001 | InterPro:IPR004298 |
| InterPro:Nicotian_synth | PFAM:PF03059 | PFscan:PS51142 | PANTHER:PTHR32266 | PANTHER:PTHR32266:SF12 | MetaCyc:PWY-5912 |
| MetaCyc:PWY-5957 | UniParc:UPI0004EE8B9D | : | : | : | : |
Description
BnaA04g06950D
Coordinates
chrLK031924:+:244975..245512
Molecular Weight (calculated)
14578.5 Da
IEP (calculated)
9.153
GRAVY (calculated)
-0.619
Length
126 amino acids
Sequence
(BLAST)
(BLAST)
001: MACQKAHFEK QILDLNNKIS NLKSLKPSKN IDNLFQQIMS TCFPTETNID VEKLCPKVQN IRTNLIKLRS EAIRYSEQHY STVLGSLEDN PLHHLDISTP
101: AYYTNYLKLS KVEVESQPRS RSWAPK
101: AYYTNYLKLS KVEVESQPRS RSWAPK
001: MACQNNLVVK QIIDLYDQIS KLKSLKPSKN VDTLFGQLVS TCLPTDTNID VTNMCEEVKD MRANLIKLCG EAEGYLEQHF STILGSLQED QNPLDHLHIF
101: PYYSNYLKLG KLEFDLLSQH SSHVPTKIAF VGSGPMPLTS IVLAKFHLPN TTFHNFDIDS HANTLASNLV SRDPDLSKRM IFHTTDVLNA TEGLDQYDVV
201: FLAALVGMDK ESKVKAIEHL EKHMAPGAVL MLRSAHALRA FLYPIVDSSD LKGFQLLTIY HPTDDVVNSV VIARKLGGPT TPGVNGTRGC MFMPCNCSKI
301: HAIMNNRGKK NMIEEFSAIE
101: PYYSNYLKLG KLEFDLLSQH SSHVPTKIAF VGSGPMPLTS IVLAKFHLPN TTFHNFDIDS HANTLASNLV SRDPDLSKRM IFHTTDVLNA TEGLDQYDVV
201: FLAALVGMDK ESKVKAIEHL EKHMAPGAVL MLRSAHALRA FLYPIVDSSD LKGFQLLTIY HPTDDVVNSV VIARKLGGPT TPGVNGTRGC MFMPCNCSKI
301: HAIMNNRGKK NMIEEFSAIE
Arabidopsis Description
NAS1Nicotianamine synthase 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9FF79]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.