Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 3
- mitochondrion 2
- cytosol 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS6A01G398700.1 | Wheat | cytosol, plastid | 70.59 | 73.17 |
| HORVU0Hr1G017720.1 | Barley | cytosol, plastid | 52.65 | 67.04 |
| TraesCS2A01G033500.1 | Wheat | cytosol | 41.76 | 50.71 |
| GSMUA_Achr5P21100_001 | Banana | cytosol | 44.41 | 47.94 |
| TraesCS6A01G163100.1 | Wheat | cytosol | 44.41 | 46.32 |
| TraesCS6A01G165100.1 | Wheat | cytosol | 44.41 | 45.9 |
| TraesCS6A01G093000.1 | Wheat | cytosol | 44.41 | 45.76 |
| TraesCS6A01G386200.1 | Wheat | cytosol | 44.41 | 45.76 |
| TraesCS6A01G163200.1 | Wheat | cytosol | 41.76 | 44.94 |
| TraesCS2A01G049900.1 | Wheat | cytosol | 43.53 | 44.85 |
| TraesCS5A01G552400.1 | Wheat | cytosol | 43.53 | 44.44 |
| GSMUA_Achr2P00420_001 | Banana | cytosol | 41.18 | 44.3 |
| TraesCS5A01G552000.1 | Wheat | cytosol | 42.94 | 43.84 |
| TraesCS2A01G095700.1 | Wheat | cytosol | 43.82 | 43.82 |
| VIT_14s0060g01190.t01 | Wine grape | cytosol | 36.76 | 38.7 |
| KRG96720 | Soybean | cytosol | 35.59 | 38.41 |
| KRH68436 | Soybean | cytosol | 35.59 | 37.69 |
| CDX98807 | Canola | cytosol | 32.65 | 37.37 |
| Solyc01g100490.2.1 | Tomato | cytosol | 34.71 | 37.22 |
| PGSC0003DMT400007275 | Potato | cytosol | 34.71 | 37.22 |
| CDX80931 | Canola | cytosol | 35.0 | 37.19 |
| AT5G04950.1 | Thale cress | cytosol | 35.0 | 37.19 |
| Bra005831.1-P | Field mustard | cytosol | 34.71 | 36.88 |
| Bra018573.1-P | Field mustard | cytosol | 35.0 | 36.84 |
| Bra009407.1-P | Field mustard | cytosol | 33.24 | 36.81 |
| CDY39002 | Canola | cytosol | 34.71 | 36.65 |
| CDY42364 | Canola | cytosol | 34.71 | 36.65 |
| KRH36982 | Soybean | cytosol | 33.24 | 36.57 |
| CDY11321 | Canola | cytosol | 34.41 | 36.56 |
| AT5G56080.1 | Thale cress | cytosol | 34.41 | 36.56 |
| AT1G09240.1 | Thale cress | cytosol | 34.41 | 36.56 |
| CDX94991 | Canola | cytosol | 34.71 | 36.53 |
| CDX93517 | Canola | cytosol | 34.71 | 36.53 |
| AT1G56430.1 | Thale cress | cytosol | 34.71 | 36.42 |
| CDY64985 | Canola | cytosol | 33.82 | 35.94 |
| Bra035602.1-P | Field mustard | cytosol | 33.82 | 35.94 |
| Bra002851.1-P | Field mustard | cytosol | 33.53 | 35.62 |
| CDY06526 | Canola | cytosol | 33.53 | 35.62 |
| CDX94325 | Canola | cytosol | 29.12 | 35.61 |
| Bra038164.1-P | Field mustard | cytosol | 33.82 | 35.6 |
| CDY69948 | Canola | cytosol | 28.82 | 35.25 |
| CDY17383 | Canola | cytosol | 32.94 | 35.0 |
| VIT_11s0052g01150.t01 | Wine grape | plastid | 29.12 | 34.86 |
| CDX70180 | Canola | cytosol | 33.24 | 34.77 |
| CDY28616 | Canola | cytosol | 32.65 | 34.69 |
| KRH13614 | Soybean | cytosol | 27.06 | 32.17 |
| KRH43850 | Soybean | cytosol | 26.76 | 31.82 |
| AT4G26483.1 | Thale cress | cytosol, extracellular, plastid | 7.65 | 30.95 |
| CDY46596 | Canola | cytosol | 17.65 | 28.85 |
| CDY09316 | Canola | cytosol | 8.24 | 27.18 |
| Bra004521.1-P | Field mustard | cytosol | 14.12 | 25.95 |
| GSMUA_Achr11P... | Banana | cytosol | 42.94 | 24.7 |
| CDY01124 | Canola | cytosol | 9.12 | 24.6 |
Protein Annotations
| EnsemblPlants:TraesCS3A01G468300.1 | EnsemblPlantsGene:TraesCS3A01G468300 | Gene3D:3.40.50.150 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0016740 | GO:GO:0030410 | GO:GO:0030418 |
| InterPro:IPR004298 | InterPro:Nicotian_synth | InterPro:SAM-dependent_MTases | PANTHER:PTHR32266 | PANTHER:PTHR32266:SF10 | PFAM:PF03059 |
| PFscan:PS51142 | SEG:seg | SUPFAM:SSF53335 | MapMan:25.4.3.1.1 | : | : |
Description
No Description!
Coordinates
chr3A:-:701210025..701211499
Molecular Weight (calculated)
36157.5 Da
IEP (calculated)
7.132
GRAVY (calculated)
0.026
Length
340 amino acids
Sequence
(BLAST)
(BLAST)
001: MEAQCKEAAA LVKKIASIHA ALSKLPPLSP SSDADALFTT LVAACVTSSP AVNVTSLGPE AGRMRDDLVR LCADAEARLE AQCADALAAL DGDPLDHLGR
101: LFPFYDSYAR LGELEHALLS RHAPDHLAVP ARVAFLGSGS LPLSPLLVAA RHMTDAAVDC YDRCAAANDR ASRLLLRPRA DDDEKRGGLA ERMSFRTADV
201: EDLTRDLAAY DVVLLAAPVG VSPGQKARVV AHLGEHMADG AVHVARSAHG ARGFLCAVLE PADVARGGFQ VLAVHHPDDR QVINSIIVAR KVAAVGGLSQ
301: LAPPVLSPPC KCCEPKTPRR RLLPTTCHLD AMNEIRRRAW
101: LFPFYDSYAR LGELEHALLS RHAPDHLAVP ARVAFLGSGS LPLSPLLVAA RHMTDAAVDC YDRCAAANDR ASRLLLRPRA DDDEKRGGLA ERMSFRTADV
201: EDLTRDLAAY DVVLLAAPVG VSPGQKARVV AHLGEHMADG AVHVARSAHG ARGFLCAVLE PADVARGGFQ VLAVHHPDDR QVINSIIVAR KVAAVGGLSQ
301: LAPPVLSPPC KCCEPKTPRR RLLPTTCHLD AMNEIRRRAW
001: MGCQDEQLVQ TICDLYEKIS KLESLKPSED VNILFKQLVS TCIPPNPNID VTKMCDRVQE IRLNLIKICG LAEGHLENHF SSILTSYQDN PLHHLNIFPY
101: YNNYLKLGKL EFDLLEQNLN GFVPKSVAFI GSGPLPLTSI VLASFHLKDT IFHNFDIDPS ANSLASLLVS SDPDISQRMF FHTVDIMDVT ESLKSFDVVF
201: LAALVGMNKE EKVKVIEHLQ KHMAPGAVLM LRSAHGPRAF LYPIVEPCDL QGFEVLSIYH PTDDVINSVV ISKKHPVVSI GNVGGPNSCL LKPCNCSKTH
301: AKMNKNMMIE EFGAREEQLS
101: YNNYLKLGKL EFDLLEQNLN GFVPKSVAFI GSGPLPLTSI VLASFHLKDT IFHNFDIDPS ANSLASLLVS SDPDISQRMF FHTVDIMDVT ESLKSFDVVF
201: LAALVGMNKE EKVKVIEHLQ KHMAPGAVLM LRSAHGPRAF LYPIVEPCDL QGFEVLSIYH PTDDVINSVV ISKKHPVVSI GNVGGPNSCL LKPCNCSKTH
301: AKMNKNMMIE EFGAREEQLS
Arabidopsis Description
NAS3Nicotianamine synthase 3 [Source:UniProtKB/Swiss-Prot;Acc:O80483]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.