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Wheat
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Wheat
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • cytosol 2
  • mitochondrion 1
  • plastid 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, mitochondrion, plastid
MultiLoc:cytosol
PProwler:mitochondrion
WoLF PSORT:plastid
YLoc:cytosol
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS6A01G386200.1 Wheat cytosol 93.64 93.64
TraesCS2A01G049900.1 Wheat cytosol 91.82 91.82
TraesCS5A01G552400.1 Wheat cytosol 90.61 89.79
TraesCS5A01G552000.1 Wheat cytosol 90.0 89.19
TraesCS6A01G163100.1 Wheat cytosol 76.36 77.3
TraesCS6A01G165100.1 Wheat cytosol 76.06 76.29
TraesCS6A01G163200.1 Wheat cytosol 73.03 76.27
Zm00001d047658_P001 Maize cytosol 74.85 75.54
Zm00001d047651_P001 Maize cytosol, endoplasmic reticulum, extracellular 74.85 75.54
Zm00001d047656_P001 Maize cytosol 73.03 73.7
Os03t0307200-01 Rice endoplasmic reticulum 72.73 73.62
TraesCS2A01G033500.1 Wheat cytosol 61.82 72.86
TraesCS2A01G095700.1 Wheat cytosol 62.73 60.88
TraesCS6A01G398700.1 Wheat cytosol, plastid 49.39 49.7
GSMUA_Achr2P00420_001 Banana cytosol 46.06 48.1
GSMUA_Achr5P21100_001 Banana cytosol 45.45 47.62
TraesCS3A01G468300.1 Wheat plastid 45.76 44.41
Bra018573.1-P Field mustard cytosol 42.12 43.03
CDX94991 Canola cytosol 41.82 42.72
CDX93517 Canola cytosol 41.82 42.72
Solyc01g100490.2.1 Tomato cytosol 40.91 42.59
AT1G09240.1 Thale cress cytosol 41.21 42.5
PGSC0003DMT400007275 Potato cytosol 40.61 42.27
CDX98807 Canola cytosol 37.88 42.09
KXG39528 Sorghum cytosol 76.36 41.72
AT5G04950.1 Thale cress cytosol 40.3 41.56
CDY64985 Canola cytosol 40.0 41.25
Bra035602.1-P Field mustard cytosol 40.0 41.25
CDY06526 Canola cytosol 40.0 41.25
AT1G56430.1 Thale cress cytosol 40.3 41.05
CDX94325 Canola cytosol 34.55 41.01
AT5G56080.1 Thale cress cytosol 39.7 40.94
Bra038164.1-P Field mustard cytosol 40.0 40.87
CDY39002 Canola cytosol 39.7 40.68
CDY42364 Canola cytosol 39.7 40.68
Bra005831.1-P Field mustard cytosol 39.39 40.62
CDY11321 Canola cytosol 39.39 40.62
VIT_14s0060g01190.t01 Wine grape cytosol 39.7 40.56
Bra002851.1-P Field mustard cytosol 39.09 40.31
CDY28616 Canola cytosol 39.09 40.31
CDX80931 Canola cytosol 39.09 40.31
CDY17383 Canola cytosol 39.09 40.31
Zm00001d028887_P001 Maize cytosol 73.03 40.1
Bra009407.1-P Field mustard cytosol 37.27 40.07
KRG96720 Soybean cytosol 38.18 40.0
CDY69948 Canola cytosol 33.64 39.93
Zm00001d028888_P001 Maize cytosol, extracellular 72.12 39.6
KRH68436 Soybean cytosol 37.88 38.94
KRH36982 Soybean cytosol 36.36 38.84
CDX70180 Canola cytosol 38.18 38.77
AT4G26483.1 Thale cress cytosol, extracellular, plastid 9.7 38.1
CDY46596 Canola cytosol 22.73 36.06
VIT_11s0052g01150.t01 Wine grape plastid 30.61 35.56
KRH43850 Soybean cytosol 30.3 34.97
KRH13614 Soybean cytosol 29.7 34.27
Bra004521.1-P Field mustard cytosol 16.36 29.19
Zm00001d047639_P004 Maize extracellular 75.15 25.08
GSMUA_Achr11P... Banana cytosol 44.85 25.04
CDY01124 Canola cytosol 9.39 24.6
CDY09316 Canola cytosol 6.67 21.36
Protein Annotations
EnsemblPlants:TraesCS6A01G093000.1EnsemblPlantsGene:TraesCS6A01G093000Gene3D:3.40.50.150GO:GO:0003674GO:GO:0003824GO:GO:0008150
GO:GO:0008152GO:GO:0009058GO:GO:0009987GO:GO:0016740GO:GO:0030410GO:GO:0030418
InterPro:IPR004298InterPro:Nicotian_synthInterPro:SAM-dependent_MTasesPANTHER:PTHR32266PANTHER:PTHR32266:SF10PFAM:PF03059
PFscan:PS51142SUPFAM:SSF53335MapMan:25.4.3.1.1:::
Description
No Description!
Coordinates
chr6A:-:60972181..60973173
Molecular Weight (calculated)
35188.9 Da
IEP (calculated)
4.843
GRAVY (calculated)
0.060
Length
330 amino acids
Sequence
(BLAST)
001: MDAQNKEVDA LVQKITGLHA AIAKLPSLSP SPDVDALFTD LVTACVPPSP VDVTKLGPEA QAMREGLIRL CSEAEGKLEA HYSDMLAAFD NPLDHLGVFP
101: YYSNYINLSK LEYELLARYV PGGIAPARVA FIGSGPLPFS SYVLAARHLP DAVFDNYDLC GAANDRASKL FRADKDVGAR MSFHTADVAD LTDELATYDV
201: VFLAALVGMA AEDKAKVIAH LGAHMADGAA LVVRSAHGAR GFLYPIVDPQ DIGRGGFEVL AVCHPDDDVV NSVIIAQKSS DMHANGFRNG RGGQCARGTV
301: PVVSPPCRFG EMVADVSQKR EEFANAEVAF
Best Arabidopsis Sequence Match ( AT1G09240.1 )
(BLAST)
001: MGCQDEQLVQ TICDLYEKIS KLESLKPSED VNILFKQLVS TCIPPNPNID VTKMCDRVQE IRLNLIKICG LAEGHLENHF SSILTSYQDN PLHHLNIFPY
101: YNNYLKLGKL EFDLLEQNLN GFVPKSVAFI GSGPLPLTSI VLASFHLKDT IFHNFDIDPS ANSLASLLVS SDPDISQRMF FHTVDIMDVT ESLKSFDVVF
201: LAALVGMNKE EKVKVIEHLQ KHMAPGAVLM LRSAHGPRAF LYPIVEPCDL QGFEVLSIYH PTDDVINSVV ISKKHPVVSI GNVGGPNSCL LKPCNCSKTH
301: AKMNKNMMIE EFGAREEQLS
Arabidopsis Description
NAS3Nicotianamine synthase 3 [Source:UniProtKB/Swiss-Prot;Acc:O80483]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.